RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.241e-18■■■■■ 66.9
PRKN-207ENST00000479615 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.466e-17■■■■■ 149.9
PRKN-207ENST00000479615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.82■□□□□ 0.442e-15■■■■■ 44.8
PRKN-207ENST00000479615 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.044e-14■■■■□ 23.3
PRKN-207ENST00000479615 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.55■□□□□ 0.083e-11■■■■■ 81.1
PRKN-207ENST00000479615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.84■□□□□ 0.454e-10■■■■□ 21.6
PRKN-207ENST00000479615 HNRNPLP14866 589 aaKnown RBP eCLIP15.75■□□□□ 0.114e-9■■■■■ 41.8
PRKN-207ENST00000479615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.88■□□□□ 0.131e-8■■■■■ 226.9
PRKN-207ENST00000479615 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.71□□□□□ -0.053e-8■■■■■ 70.6
PRKN-207ENST00000479615 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.763e-8■■■■■ 70.1
PRKN-207ENST00000479615 PUS1Q9Y606 427 aaKnown RBP eCLIP11.19□□□□□ -0.629e-8■■■■■ 35.6
PRKN-207ENST00000479615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.13□□□□□ -0.151e-7■■■■■ 323.4
PRKN-207ENST00000479615 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.9□□□□□ -0.185e-7■■■■■ 41.5
PRKN-207ENST00000479615 MATR3P43243 847 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■■□ 23.9
PRKN-207ENST00000479615 DKC1O60832 514 aaKnown RBP eCLIP16.98■□□□□ 0.312e-6■■■■■ 33.3
PRKN-207ENST00000479615 TROVE2P10155 538 aaKnown RBP eCLIP13.18□□□□□ -0.32e-6■■■■■ 29.4
PRKN-207ENST00000479615 RPS3P23396 243 aaKnown RBP eCLIP14.57□□□□□ -0.084e-6■■■■■ 40.4
PRKN-207ENST00000479615 EIF4G2P78344 907 aaKnown RBP eCLIP20.9■□□□□ 0.946e-6■■■■□ 25.1
PRKN-207ENST00000479615 DDX21Q9NR30 783 aaKnown RBP eCLIP19.61■□□□□ 0.738e-6■■□□□ 14
Retrieved 19 of 19 RNA–protein pairs in 13.2 ms