RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SHROOM2Q13796 1616 aa34.18■■■■□ 3.06
VARS-224ENST00000479051 CSRNP3Q8WYN3 585 aa34.16■■■■□ 3.06
VARS-224ENST00000479051 JPH4Q96JJ6 628 aa34.15■■■■□ 3.06
VARS-224ENST00000479051 ARAP1Q96P48 1450 aa34.14■■■■□ 3.06
VARS-224ENST00000479051 PRXQ9BXM0 1461 aa34.13■■■■□ 3.05
VARS-224ENST00000479051 CYB5RLQ6IPT4 315 aa34.12■■■■□ 3.05
VARS-224ENST00000479051 PRG4Q92954 1404 aaPredicted RBP34.06■■■■□ 3.04
VARS-224ENST00000479051 FAM9AQ8IZU1 332 aaPredicted RBP34.05■■■■□ 3.04
VARS-224ENST00000479051 IQGAP2Q13576 1575 aa34.02■■■■□ 3.04
VARS-224ENST00000479051 ERCC6L2Q5T890 1561 aa34.02■■■■□ 3.04
VARS-224ENST00000479051 CTTNBP2Q8WZ74 1663 aa33.92■■■■□ 3.02
VARS-224ENST00000479051 CARMIL2Q6F5E8 1435 aa33.88■■■■□ 3.01
VARS-224ENST00000479051 KIF21BO75037 1637 aa33.84■■■■□ 3.01
VARS-224ENST00000479051 UGGT2Q9NYU1 1516 aa33.82■■■■□ 3
VARS-224ENST00000479051 DISP1Q96F81 1524 aa33.73■■■□□ 2.99
VARS-224ENST00000479051 TNIKQ9UKE5 1360 aa33.72■■■□□ 2.99
VARS-224ENST00000479051 GOLGA3Q08378 1498 aa33.71■■■□□ 2.99
VARS-224ENST00000479051 PTPRGP23470 1445 aa33.7■■■□□ 2.98
VARS-224ENST00000479051 KIAA0556O60303 1618 aa33.68■■■□□ 2.98
VARS-224ENST00000479051 TTBK1Q5TCY1 1321 aaPredicted RBP33.63■■■□□ 2.97
VARS-224ENST00000479051 UBTFP17480 764 aaKnown RBP33.61■■■□□ 2.97
VARS-224ENST00000479051 EHMT2Q96KQ7 1210 aa33.59■■■□□ 2.97
VARS-224ENST00000479051 NPM1P06748 294 aaKnown RBP eCLIP33.53■■■□□ 2.96
VARS-224ENST00000479051 ADCY10Q96PN6 1610 aa33.5■■■□□ 2.95
VARS-224ENST00000479051 RANGAP1P46060 587 aaPredicted RBP33.48■■■□□ 2.95
VARS-224ENST00000479051 SAMD9Q5K651 1589 aa33.47■■■□□ 2.95
VARS-224ENST00000479051 UACAQ9BZF9 1416 aa33.46■■■□□ 2.95
VARS-224ENST00000479051 TRHP20396 242 aaPredicted RBP33.44■■■□□ 2.94
VARS-224ENST00000479051 P3H3Q8IVL6 736 aa33.43■■■□□ 2.94
VARS-224ENST00000479051 UHRF1BP1LA0JNW5 1464 aa33.43■■■□□ 2.94
VARS-224ENST00000479051 EFCAB5A4FU69 1503 aa33.4■■■□□ 2.94
VARS-224ENST00000479051 ABCC2Q92887 1545 aa33.4■■■□□ 2.94
VARS-224ENST00000479051 MAPKBP1O60336 1514 aa33.32■■■□□ 2.92
VARS-224ENST00000479051 PLB1Q6P1J6 1458 aa33.31■■■□□ 2.92
VARS-224ENST00000479051 FHOD3Q2V2M9 1422 aa33.29■■■□□ 2.92
VARS-224ENST00000479051 ABCA8O94911 1581 aa33.29■■■□□ 2.92
VARS-224ENST00000479051 KDM5BQ9UGL1 1544 aa33.25■■■□□ 2.91
VARS-224ENST00000479051 ARHGAP35Q9NRY4 1499 aa33.18■■■□□ 2.9
VARS-224ENST00000479051 ZCCHC11Q5TAX3 1644 aaKnown RBP33.17■■■□□ 2.9
VARS-224ENST00000479051 RAPGEF6Q8TEU7 1601 aa33.16■■■□□ 2.9
VARS-224ENST00000479051 ABCC10Q5T3U5 1492 aa33.14■■■□□ 2.9
VARS-224ENST00000479051 ASXL2Q76L83 1435 aa33.14■■■□□ 2.9
VARS-224ENST00000479051 FMN1Q68DA7 1419 aa33.11■■■□□ 2.89
VARS-224ENST00000479051 FAM69CQ0P6D2 419 aa33.09■■■□□ 2.89
VARS-224ENST00000479051 KIF13AQ9H1H9 1805 aa33.07■■■□□ 2.89
VARS-224ENST00000479051 CLIP1P30622 1438 aa33.07■■■□□ 2.88
VARS-224ENST00000479051 DIP2BQ9P265 1576 aa33.07■■■□□ 2.88
VARS-224ENST00000479051 ARID3CA6NKF2 412 aa33.02■■■□□ 2.88
VARS-224ENST00000479051 ATP10BO94823 1461 aa33.01■■■□□ 2.88
VARS-224ENST00000479051 NUP153P49790 1475 aaKnown RBP33.01■■■□□ 2.88
VARS-224ENST00000479051 WDR7Q9Y4E6 1490 aa33■■■□□ 2.87
VARS-224ENST00000479051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.98■■■□□ 2.87
VARS-224ENST00000479051 HNRNPUL2Q1KMD3 747 aaKnown RBP32.98■■■□□ 2.87
VARS-224ENST00000479051 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
VARS-224ENST00000479051 EPRSP07814 1512 aaKnown RBP32.93■■■□□ 2.86
VARS-224ENST00000479051 GLI2P10070 1586 aa32.93■■■□□ 2.86
VARS-224ENST00000479051 CEP162Q5TB80 1403 aa32.93■■■□□ 2.86
VARS-224ENST00000479051 HECW1Q76N89 1606 aa32.92■■■□□ 2.86
VARS-224ENST00000479051 ATP1B4Q9UN42 357 aaPredicted RBP32.91■■■□□ 2.86
VARS-224ENST00000479051 KCNH8Q96L42 1107 aa32.86■■■□□ 2.85
VARS-224ENST00000479051 PLEKHD1A6NEE1 506 aa32.82■■■□□ 2.84
VARS-224ENST00000479051 CASKIN1Q8WXD9 1431 aa32.82■■■□□ 2.84
VARS-224ENST00000479051 TSPOAP1O95153 1857 aa32.79■■■□□ 2.84
VARS-224ENST00000479051 PCF11O94913 1555 aaKnown RBP32.79■■■□□ 2.84
VARS-224ENST00000479051 CDK13Q14004 1512 aaKnown RBP32.78■■■□□ 2.84
VARS-224ENST00000479051 MAP3K4Q9Y6R4 1608 aa32.77■■■□□ 2.84
VARS-224ENST00000479051 FYCO1Q9BQS8 1478 aa32.76■■■□□ 2.84
VARS-224ENST00000479051 CDK11AQ9UQ88 783 aaPredicted RBP32.76■■■□□ 2.83
VARS-224ENST00000479051 CFAP43Q8NDM7 1665 aa32.72■■■□□ 2.83
VARS-224ENST00000479051 CCDC18Q5T9S5 1454 aa32.72■■■□□ 2.83
VARS-224ENST00000479051 TEX14Q8IWB6 1497 aa32.7■■■□□ 2.83
VARS-224ENST00000479051 CD109Q6YHK3 1445 aa32.69■■■□□ 2.82
VARS-224ENST00000479051 ABCA9Q8IUA7 1624 aa32.65■■■□□ 2.82
VARS-224ENST00000479051 PPRC1Q5VV67 1664 aaKnown RBP32.65■■■□□ 2.82
VARS-224ENST00000479051 LRRIQ1Q96JM4 1722 aa32.63■■■□□ 2.81
VARS-224ENST00000479051 MAGI3Q5TCQ9 1506 aa32.61■■■□□ 2.81
VARS-224ENST00000479051 TROQ12816 1431 aaPredicted RBP32.57■■■□□ 2.8
VARS-224ENST00000479051 KDM6BO15054 1643 aa32.55■■■□□ 2.8
VARS-224ENST00000479051 VPS8Q8N3P4 1428 aa32.53■■■□□ 2.8
VARS-224ENST00000479051 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.52■■■□□ 2.8
VARS-224ENST00000479051 KIF14Q15058 1648 aa32.51■■■□□ 2.8
VARS-224ENST00000479051 TTC37Q6PGP7 1564 aa32.46■■■□□ 2.79
VARS-224ENST00000479051 PHLDB1Q86UU1 1377 aa32.44■■■□□ 2.78
VARS-224ENST00000479051 NEO1Q92859 1461 aa32.42■■■□□ 2.78
VARS-224ENST00000479051 MTUS2Q5JR59 1369 aa32.39■■■□□ 2.78
VARS-224ENST00000479051 CFAP74Q9C0B2 1584 aa32.37■■■□□ 2.77
VARS-224ENST00000479051 PLCH2O75038 1416 aa32.36■■■□□ 2.77
VARS-224ENST00000479051 MYO5CQ9NQX4 1742 aa32.35■■■□□ 2.77
VARS-224ENST00000479051 FANCAO15360 1455 aa32.35■■■□□ 2.77
VARS-224ENST00000479051 COL17A1Q9UMD9 1497 aaPredicted RBP32.34■■■□□ 2.77
VARS-224ENST00000479051 ARAP3Q8WWN8 1544 aa32.33■■■□□ 2.77
VARS-224ENST00000479051 EHBP1L1Q8N3D4 1523 aa32.31■■■□□ 2.76
VARS-224ENST00000479051 TIAM1Q13009 1591 aa32.3■■■□□ 2.76
VARS-224ENST00000479051 AKNAQ7Z591 1439 aa32.27■■■□□ 2.76
VARS-224ENST00000479051 EFCAB2Q5VUJ9 269 aa32.27■■■□□ 2.76
VARS-224ENST00000479051 APLP2Q06481 763 aa32.26■■■□□ 2.75
VARS-224ENST00000479051 ARHGAP5Q13017 1502 aa32.26■■■□□ 2.75
VARS-224ENST00000479051 MAP3K1Q13233 1512 aa32.25■■■□□ 2.75
VARS-224ENST00000479051 PREX2Q70Z35 1606 aa32.21■■■□□ 2.75
VARS-224ENST00000479051 DENND4BO75064 1496 aaPredicted RBP32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms