RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 RAPGEF2Q9Y4G8 1499 aa34.91■■■■□ 3.18
COL19A1-203ENST00000478620 JPH4Q96JJ6 628 aa34.9■■■■□ 3.18
COL19A1-203ENST00000478620 EEA1Q15075 1411 aa34.85■■■■□ 3.17
COL19A1-203ENST00000478620 KIAA0586Q9BVV6 1533 aa34.82■■■■□ 3.16
COL19A1-203ENST00000478620 PRG4Q92954 1404 aaPredicted RBP34.76■■■■□ 3.16
COL19A1-203ENST00000478620 ARAP1Q96P48 1450 aa34.76■■■■□ 3.15
COL19A1-203ENST00000478620 PRXQ9BXM0 1461 aa34.74■■■■□ 3.15
COL19A1-203ENST00000478620 SHROOM2Q13796 1616 aa34.72■■■■□ 3.15
COL19A1-203ENST00000478620 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
COL19A1-203ENST00000478620 IQGAP2Q13576 1575 aa34.61■■■■□ 3.13
COL19A1-203ENST00000478620 EHMT2Q96KQ7 1210 aa34.54■■■■□ 3.12
COL19A1-203ENST00000478620 CARMIL2Q6F5E8 1435 aa34.53■■■■□ 3.12
COL19A1-203ENST00000478620 TTBK1Q5TCY1 1321 aaPredicted RBP34.52■■■■□ 3.12
COL19A1-203ENST00000478620 CTTNBP2Q8WZ74 1663 aa34.45■■■■□ 3.11
COL19A1-203ENST00000478620 UBTFP17480 764 aaKnown RBP34.41■■■■□ 3.1
COL19A1-203ENST00000478620 UGGT2Q9NYU1 1516 aa34.4■■■■□ 3.1
COL19A1-203ENST00000478620 KIF21BO75037 1637 aa34.4■■■■□ 3.1
COL19A1-203ENST00000478620 PTPRGP23470 1445 aa34.39■■■■□ 3.1
COL19A1-203ENST00000478620 TNIKQ9UKE5 1360 aa34.39■■■■□ 3.1
COL19A1-203ENST00000478620 RANGAP1P46060 587 aaPredicted RBP34.37■■■■□ 3.09
COL19A1-203ENST00000478620 DISP1Q96F81 1524 aa34.35■■■■□ 3.09
COL19A1-203ENST00000478620 GOLGA3Q08378 1498 aa34.32■■■■□ 3.08
COL19A1-203ENST00000478620 NPM1P06748 294 aaKnown RBP eCLIP34.29■■■■□ 3.08
COL19A1-203ENST00000478620 P3H3Q8IVL6 736 aa34.27■■■■□ 3.08
COL19A1-203ENST00000478620 TRHP20396 242 aaPredicted RBP34.26■■■■□ 3.08
COL19A1-203ENST00000478620 KIAA0556O60303 1618 aa34.24■■■■□ 3.07
COL19A1-203ENST00000478620 UACAQ9BZF9 1416 aa34.11■■■■□ 3.05
COL19A1-203ENST00000478620 ADCY10Q96PN6 1610 aa34.09■■■■□ 3.05
COL19A1-203ENST00000478620 SAMD9Q5K651 1589 aa34.01■■■■□ 3.03
COL19A1-203ENST00000478620 UHRF1BP1LA0JNW5 1464 aa34■■■■□ 3.03
COL19A1-203ENST00000478620 PLB1Q6P1J6 1458 aa33.97■■■■□ 3.03
COL19A1-203ENST00000478620 ABCC2Q92887 1545 aa33.97■■■■□ 3.03
COL19A1-203ENST00000478620 FHOD3Q2V2M9 1422 aa33.96■■■■□ 3.03
COL19A1-203ENST00000478620 EFCAB5A4FU69 1503 aa33.94■■■■□ 3.02
COL19A1-203ENST00000478620 ARID3CA6NKF2 412 aa33.87■■■■□ 3.01
COL19A1-203ENST00000478620 ABCA8O94911 1581 aa33.86■■■■□ 3.01
COL19A1-203ENST00000478620 MAPKBP1O60336 1514 aa33.85■■■■□ 3.01
COL19A1-203ENST00000478620 LOC105371045A0A1W2PR82 267 aa33.84■■■■□ 3.01
COL19A1-203ENST00000478620 FAM69CQ0P6D2 419 aa33.84■■■■□ 3.01
COL19A1-203ENST00000478620 KDM5BQ9UGL1 1544 aa33.83■■■■□ 3.01
COL19A1-203ENST00000478620 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
COL19A1-203ENST00000478620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.79■■■■□ 3
COL19A1-203ENST00000478620 HNRNPUL2Q1KMD3 747 aaKnown RBP33.79■■■■□ 3
COL19A1-203ENST00000478620 ASXL2Q76L83 1435 aa33.79■■■■□ 3
COL19A1-203ENST00000478620 ATP1B4Q9UN42 357 aaPredicted RBP33.77■■■■□ 3
COL19A1-203ENST00000478620 ZCCHC11Q5TAX3 1644 aaKnown RBP33.75■■■□□ 2.99
COL19A1-203ENST00000478620 ABCC10Q5T3U5 1492 aa33.75■■■□□ 2.99
COL19A1-203ENST00000478620 RAPGEF6Q8TEU7 1601 aa33.74■■■□□ 2.99
COL19A1-203ENST00000478620 CLIP1P30622 1438 aa33.72■■■□□ 2.99
COL19A1-203ENST00000478620 FMN1Q68DA7 1419 aa33.7■■■□□ 2.99
COL19A1-203ENST00000478620 KCNH8Q96L42 1107 aa33.67■■■□□ 2.98
COL19A1-203ENST00000478620 ATP10BO94823 1461 aa33.67■■■□□ 2.98
COL19A1-203ENST00000478620 KIF13AQ9H1H9 1805 aa33.63■■■□□ 2.97
COL19A1-203ENST00000478620 DIP2BQ9P265 1576 aa33.62■■■□□ 2.97
COL19A1-203ENST00000478620 NUP153P49790 1475 aaKnown RBP33.62■■■□□ 2.97
COL19A1-203ENST00000478620 WDR7Q9Y4E6 1490 aa33.6■■■□□ 2.97
COL19A1-203ENST00000478620 CEP162Q5TB80 1403 aa33.57■■■□□ 2.96
COL19A1-203ENST00000478620 PLEKHD1A6NEE1 506 aa33.56■■■□□ 2.96
COL19A1-203ENST00000478620 EPRSP07814 1512 aaKnown RBP33.55■■■□□ 2.96
COL19A1-203ENST00000478620 GLI2P10070 1586 aa33.48■■■□□ 2.95
COL19A1-203ENST00000478620 HECW1Q76N89 1606 aa33.46■■■□□ 2.95
COL19A1-203ENST00000478620 CDK11AQ9UQ88 783 aaPredicted RBP33.45■■■□□ 2.95
COL19A1-203ENST00000478620 TSPOAP1O95153 1857 aa33.44■■■□□ 2.94
COL19A1-203ENST00000478620 CASKIN1Q8WXD9 1431 aa33.43■■■□□ 2.94
COL19A1-203ENST00000478620 CDK13Q14004 1512 aaKnown RBP33.42■■■□□ 2.94
COL19A1-203ENST00000478620 AEBP2Q6ZN18 517 aaPredicted RBP33.38■■■□□ 2.93
COL19A1-203ENST00000478620 CD109Q6YHK3 1445 aa33.36■■■□□ 2.93
COL19A1-203ENST00000478620 PCF11O94913 1555 aaKnown RBP33.35■■■□□ 2.93
COL19A1-203ENST00000478620 FYCO1Q9BQS8 1478 aa33.31■■■□□ 2.92
COL19A1-203ENST00000478620 MAP3K4Q9Y6R4 1608 aa33.3■■■□□ 2.92
COL19A1-203ENST00000478620 CCDC18Q5T9S5 1454 aa33.27■■■□□ 2.92
COL19A1-203ENST00000478620 TEX14Q8IWB6 1497 aa33.26■■■□□ 2.92
COL19A1-203ENST00000478620 CFAP43Q8NDM7 1665 aa33.25■■■□□ 2.91
COL19A1-203ENST00000478620 PPRC1Q5VV67 1664 aaKnown RBP33.2■■■□□ 2.9
COL19A1-203ENST00000478620 LRRIQ1Q96JM4 1722 aa33.19■■■□□ 2.9
COL19A1-203ENST00000478620 ABCA9Q8IUA7 1624 aa33.19■■■□□ 2.9
COL19A1-203ENST00000478620 MAGI3Q5TCQ9 1506 aa33.18■■■□□ 2.9
COL19A1-203ENST00000478620 TROQ12816 1431 aaPredicted RBP33.18■■■□□ 2.9
COL19A1-203ENST00000478620 VPS8Q8N3P4 1428 aa33.14■■■□□ 2.9
COL19A1-203ENST00000478620 KDM6BO15054 1643 aa33.13■■■□□ 2.89
COL19A1-203ENST00000478620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.12■■■□□ 2.89
COL19A1-203ENST00000478620 MTUS2Q5JR59 1369 aa33.06■■■□□ 2.88
COL19A1-203ENST00000478620 KIF14Q15058 1648 aa33.06■■■□□ 2.88
COL19A1-203ENST00000478620 TTC37Q6PGP7 1564 aa33.03■■■□□ 2.88
COL19A1-203ENST00000478620 PHLDB1Q86UU1 1377 aa33.02■■■□□ 2.88
COL19A1-203ENST00000478620 APLP2Q06481 763 aa33.02■■■□□ 2.88
COL19A1-203ENST00000478620 COL17A1Q9UMD9 1497 aaPredicted RBP32.99■■■□□ 2.87
COL19A1-203ENST00000478620 PLCH2O75038 1416 aa32.98■■■□□ 2.87
COL19A1-203ENST00000478620 EFCAB2Q5VUJ9 269 aa32.98■■■□□ 2.87
COL19A1-203ENST00000478620 NEO1Q92859 1461 aa32.98■■■□□ 2.87
COL19A1-203ENST00000478620 FANCAO15360 1455 aa32.96■■■□□ 2.87
COL19A1-203ENST00000478620 AKNAQ7Z591 1439 aa32.93■■■□□ 2.86
COL19A1-203ENST00000478620 ARAP3Q8WWN8 1544 aa32.9■■■□□ 2.86
COL19A1-203ENST00000478620 MYO5CQ9NQX4 1742 aa32.89■■■□□ 2.86
COL19A1-203ENST00000478620 RAPGEF3O95398 923 aa32.89■■■□□ 2.86
COL19A1-203ENST00000478620 TIAM1Q13009 1591 aa32.87■■■□□ 2.85
COL19A1-203ENST00000478620 CFAP74Q9C0B2 1584 aa32.87■■■□□ 2.85
COL19A1-203ENST00000478620 ARHGAP5Q13017 1502 aa32.87■■■□□ 2.85
COL19A1-203ENST00000478620 CCNB3Q8WWL7 1395 aa32.85■■■□□ 2.85
COL19A1-203ENST00000478620 EHBP1L1Q8N3D4 1523 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms