RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 CYB5RLQ6IPT4 315 aa22.07■■□□□ 1.12
COL1A2-207ENST00000478215 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
COL1A2-207ENST00000478215 KIAA0586Q9BVV6 1533 aa22.02■■□□□ 1.12
COL1A2-207ENST00000478215 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
COL1A2-207ENST00000478215 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
COL1A2-207ENST00000478215 IQGAP2Q13576 1575 aa21.98■■□□□ 1.11
COL1A2-207ENST00000478215 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
COL1A2-207ENST00000478215 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
COL1A2-207ENST00000478215 PRXQ9BXM0 1461 aa21.94■■□□□ 1.1
COL1A2-207ENST00000478215 EEA1Q15075 1411 aa21.88■■□□□ 1.09
COL1A2-207ENST00000478215 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
COL1A2-207ENST00000478215 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
COL1A2-207ENST00000478215 FAM9AQ8IZU1 332 aaPredicted RBP21.81■■□□□ 1.08
COL1A2-207ENST00000478215 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
COL1A2-207ENST00000478215 KIF21BO75037 1637 aa21.79■■□□□ 1.08
COL1A2-207ENST00000478215 KIAA0556O60303 1618 aa21.78■■□□□ 1.08
COL1A2-207ENST00000478215 ADCY10Q96PN6 1610 aa21.78■■□□□ 1.08
COL1A2-207ENST00000478215 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
COL1A2-207ENST00000478215 KIF13AQ9H1H9 1805 aa21.7■■□□□ 1.06
COL1A2-207ENST00000478215 TNIKQ9UKE5 1360 aa21.69■■□□□ 1.06
COL1A2-207ENST00000478215 PTPRGP23470 1445 aa21.68■■□□□ 1.06
COL1A2-207ENST00000478215 TTBK1Q5TCY1 1321 aaPredicted RBP21.66■■□□□ 1.06
COL1A2-207ENST00000478215 SAMD9Q5K651 1589 aa21.64■■□□□ 1.05
COL1A2-207ENST00000478215 GOLGA3Q08378 1498 aa21.63■■□□□ 1.05
COL1A2-207ENST00000478215 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
COL1A2-207ENST00000478215 ABCC2Q92887 1545 aa21.58■■□□□ 1.04
COL1A2-207ENST00000478215 MAPKBP1O60336 1514 aa21.57■■□□□ 1.04
COL1A2-207ENST00000478215 UHRF1BP1LA0JNW5 1464 aa21.56■■□□□ 1.04
COL1A2-207ENST00000478215 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
COL1A2-207ENST00000478215 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
COL1A2-207ENST00000478215 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
COL1A2-207ENST00000478215 ABCA8O94911 1581 aa21.53■■□□□ 1.04
COL1A2-207ENST00000478215 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.03
COL1A2-207ENST00000478215 DIP2BQ9P265 1576 aa21.5■■□□□ 1.03
COL1A2-207ENST00000478215 TSPOAP1O95153 1857 aa21.49■■□□□ 1.03
COL1A2-207ENST00000478215 NPM1P06748 294 aaKnown RBP eCLIP21.49■■□□□ 1.03
COL1A2-207ENST00000478215 P3H3Q8IVL6 736 aa21.49■■□□□ 1.03
COL1A2-207ENST00000478215 KDM5BQ9UGL1 1544 aa21.48■■□□□ 1.03
COL1A2-207ENST00000478215 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
COL1A2-207ENST00000478215 EFCAB5A4FU69 1503 aa21.46■■□□□ 1.03
COL1A2-207ENST00000478215 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
COL1A2-207ENST00000478215 RAPGEF6Q8TEU7 1601 aa21.44■■□□□ 1.02
COL1A2-207ENST00000478215 FHOD3Q2V2M9 1422 aa21.44■■□□□ 1.02
COL1A2-207ENST00000478215 ABCC10Q5T3U5 1492 aa21.44■■□□□ 1.02
COL1A2-207ENST00000478215 ASXL2Q76L83 1435 aa21.4■■□□□ 1.02
COL1A2-207ENST00000478215 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
COL1A2-207ENST00000478215 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
COL1A2-207ENST00000478215 FAM69CQ0P6D2 419 aa21.34■■□□□ 1.01
COL1A2-207ENST00000478215 GLI2P10070 1586 aa21.33■■□□□ 1.01
COL1A2-207ENST00000478215 MAP3K4Q9Y6R4 1608 aa21.31■■□□□ 1
COL1A2-207ENST00000478215 LRRIQ1Q96JM4 1722 aa21.3■■□□□ 1
COL1A2-207ENST00000478215 ATP10BO94823 1461 aa21.3■■□□□ 1
COL1A2-207ENST00000478215 NUP153P49790 1475 aaKnown RBP21.3■■□□□ 1
COL1A2-207ENST00000478215 WDR7Q9Y4E6 1490 aa21.3■■□□□ 1
COL1A2-207ENST00000478215 EPRSP07814 1512 aaKnown RBP21.29■■□□□ 1
COL1A2-207ENST00000478215 ARID3CA6NKF2 412 aa21.28■■□□□ 1
COL1A2-207ENST00000478215 CFAP43Q8NDM7 1665 aa21.25■□□□□ 0.99
COL1A2-207ENST00000478215 HECW1Q76N89 1606 aa21.22■□□□□ 0.99
COL1A2-207ENST00000478215 FMN1Q68DA7 1419 aa21.2■□□□□ 0.98
COL1A2-207ENST00000478215 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
COL1A2-207ENST00000478215 PCF11O94913 1555 aaKnown RBP21.18■□□□□ 0.98
COL1A2-207ENST00000478215 CLIP1P30622 1438 aa21.17■□□□□ 0.98
COL1A2-207ENST00000478215 KDM6BO15054 1643 aa21.16■□□□□ 0.98
COL1A2-207ENST00000478215 ABCA9Q8IUA7 1624 aa21.15■□□□□ 0.98
COL1A2-207ENST00000478215 KCNH8Q96L42 1107 aa21.14■□□□□ 0.97
COL1A2-207ENST00000478215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.11■□□□□ 0.97
COL1A2-207ENST00000478215 HNRNPUL2Q1KMD3 747 aaKnown RBP21.11■□□□□ 0.97
COL1A2-207ENST00000478215 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
COL1A2-207ENST00000478215 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
COL1A2-207ENST00000478215 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
COL1A2-207ENST00000478215 TEX14Q8IWB6 1497 aa21.07■□□□□ 0.96
COL1A2-207ENST00000478215 CASKIN1Q8WXD9 1431 aa21.06■□□□□ 0.96
COL1A2-207ENST00000478215 MAGI3Q5TCQ9 1506 aa21.06■□□□□ 0.96
COL1A2-207ENST00000478215 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
COL1A2-207ENST00000478215 TTC37Q6PGP7 1564 aa21.06■□□□□ 0.96
COL1A2-207ENST00000478215 FYCO1Q9BQS8 1478 aa21.04■□□□□ 0.96
COL1A2-207ENST00000478215 KIF14Q15058 1648 aa21.03■□□□□ 0.96
COL1A2-207ENST00000478215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.02■□□□□ 0.96
COL1A2-207ENST00000478215 PLEKHD1A6NEE1 506 aa21.01■□□□□ 0.95
COL1A2-207ENST00000478215 MYO5CQ9NQX4 1742 aa21.01■□□□□ 0.95
COL1A2-207ENST00000478215 COL17A1Q9UMD9 1497 aaPredicted RBP21.01■□□□□ 0.95
COL1A2-207ENST00000478215 CCDC18Q5T9S5 1454 aa20.99■□□□□ 0.95
COL1A2-207ENST00000478215 TROQ12816 1431 aaPredicted RBP20.93■□□□□ 0.94
COL1A2-207ENST00000478215 CDC42BPBQ9Y5S2 1711 aa20.92■□□□□ 0.94
COL1A2-207ENST00000478215 CFAP74Q9C0B2 1584 aa20.92■□□□□ 0.94
COL1A2-207ENST00000478215 CDC42BPAQ5VT25 1732 aa20.92■□□□□ 0.94
COL1A2-207ENST00000478215 ARAP3Q8WWN8 1544 aa20.89■□□□□ 0.94
COL1A2-207ENST00000478215 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
COL1A2-207ENST00000478215 RICTORQ6R327 1708 aa20.89■□□□□ 0.93
COL1A2-207ENST00000478215 NEO1Q92859 1461 aa20.88■□□□□ 0.93
COL1A2-207ENST00000478215 FRMPD1Q5SYB0 1578 aa20.86■□□□□ 0.93
COL1A2-207ENST00000478215 PREX2Q70Z35 1606 aa20.86■□□□□ 0.93
COL1A2-207ENST00000478215 FANCAO15360 1455 aa20.84■□□□□ 0.93
COL1A2-207ENST00000478215 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
COL1A2-207ENST00000478215 PLCH2O75038 1416 aa20.81■□□□□ 0.92
COL1A2-207ENST00000478215 PHLDB1Q86UU1 1377 aa20.81■□□□□ 0.92
COL1A2-207ENST00000478215 AKNAQ7Z591 1439 aa20.79■□□□□ 0.92
COL1A2-207ENST00000478215 TIAM1Q13009 1591 aa20.79■□□□□ 0.92
COL1A2-207ENST00000478215 ARHGAP5Q13017 1502 aa20.78■□□□□ 0.92
COL1A2-207ENST00000478215 EHBP1L1Q8N3D4 1523 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms