RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 JPH4Q96JJ6 628 aa36.58■■■■□ 3.45
PDLIM1-202ENST00000477757 ABCC10Q5T3U5 1492 aa36.57■■■■□ 3.45
PDLIM1-202ENST00000477757 MAPKBP1O60336 1514 aa36.56■■■■□ 3.44
PDLIM1-202ENST00000477757 DIP2BQ9P265 1576 aa36.49■■■■□ 3.43
PDLIM1-202ENST00000477757 ADCY10Q96PN6 1610 aa36.46■■■■□ 3.43
PDLIM1-202ENST00000477757 FAM69CQ0P6D2 419 aa36.46■■■■□ 3.43
PDLIM1-202ENST00000477757 NPM1P06748 294 aaKnown RBP eCLIP36.4■■■■□ 3.42
PDLIM1-202ENST00000477757 KDM6BO15054 1643 aa36.33■■■■□ 3.41
PDLIM1-202ENST00000477757 KIAA0586Q9BVV6 1533 aa36.29■■■■□ 3.4
PDLIM1-202ENST00000477757 CUL7Q14999 1698 aa36.2■■■■□ 3.39
PDLIM1-202ENST00000477757 KDM4FA0A1W2PPD8 638 aa36.17■■■■□ 3.38
PDLIM1-202ENST00000477757 TSPOAP1O95153 1857 aa36.16■■■■□ 3.38
PDLIM1-202ENST00000477757 IGF1RP08069 1367 aa36.14■■■■□ 3.38
PDLIM1-202ENST00000477757 KIF27Q86VH2 1401 aa36.09■■■■□ 3.37
PDLIM1-202ENST00000477757 PTPRGP23470 1445 aa36.04■■■■□ 3.36
PDLIM1-202ENST00000477757 ABCC2Q92887 1545 aa36.01■■■■□ 3.36
PDLIM1-202ENST00000477757 PPRC1Q5VV67 1664 aaKnown RBP35.95■■■■□ 3.35
PDLIM1-202ENST00000477757 GLI2P10070 1586 aa35.95■■■■□ 3.35
PDLIM1-202ENST00000477757 TNIKQ9UKE5 1360 aa35.95■■■■□ 3.35
PDLIM1-202ENST00000477757 CARMIL2Q6F5E8 1435 aa35.93■■■■□ 3.34
PDLIM1-202ENST00000477757 PLB1Q6P1J6 1458 aa35.92■■■■□ 3.34
PDLIM1-202ENST00000477757 ASXL2Q76L83 1435 aa35.91■■■■□ 3.34
PDLIM1-202ENST00000477757 UHRF1BP1LA0JNW5 1464 aa35.88■■■■□ 3.33
PDLIM1-202ENST00000477757 IQGAP2Q13576 1575 aa35.88■■■■□ 3.33
PDLIM1-202ENST00000477757 CARMIL1Q5VZK9 1371 aa35.88■■■■□ 3.33
PDLIM1-202ENST00000477757 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
PDLIM1-202ENST00000477757 ADGRL1O94910 1474 aa35.81■■■■□ 3.32
PDLIM1-202ENST00000477757 UACAQ9BZF9 1416 aa35.77■■■■□ 3.32
PDLIM1-202ENST00000477757 DISP1Q96F81 1524 aa35.75■■■■□ 3.31
PDLIM1-202ENST00000477757 MAP3K4Q9Y6R4 1608 aa35.74■■■■□ 3.31
PDLIM1-202ENST00000477757 ILDR1Q86SU0 546 aaPredicted RBP35.73■■■■□ 3.31
PDLIM1-202ENST00000477757 EPRSP07814 1512 aaKnown RBP35.72■■■■□ 3.31
PDLIM1-202ENST00000477757 KDM5BQ9UGL1 1544 aa35.72■■■■□ 3.31
PDLIM1-202ENST00000477757 COL17A1Q9UMD9 1497 aaPredicted RBP35.7■■■■□ 3.31
PDLIM1-202ENST00000477757 TEX14Q8IWB6 1497 aa35.67■■■■□ 3.3
PDLIM1-202ENST00000477757 ZCCHC11Q5TAX3 1644 aaKnown RBP35.64■■■■□ 3.3
PDLIM1-202ENST00000477757 UGGT2Q9NYU1 1516 aa35.63■■■■□ 3.29
PDLIM1-202ENST00000477757 KIAA0556O60303 1618 aa35.57■■■■□ 3.29
PDLIM1-202ENST00000477757 HECW2Q9P2P5 1572 aa35.55■■■■□ 3.28
PDLIM1-202ENST00000477757 RAPGEF2Q9Y4G8 1499 aa35.52■■■■□ 3.28
PDLIM1-202ENST00000477757 WDR7Q9Y4E6 1490 aa35.49■■■■□ 3.27
PDLIM1-202ENST00000477757 MAGI3Q5TCQ9 1506 aa35.36■■■■□ 3.25
PDLIM1-202ENST00000477757 CFAP43Q8NDM7 1665 aa35.35■■■■□ 3.25
PDLIM1-202ENST00000477757 CTTNBP2Q8WZ74 1663 aa35.31■■■■□ 3.24
PDLIM1-202ENST00000477757 CD109Q6YHK3 1445 aa35.29■■■■□ 3.24
PDLIM1-202ENST00000477757 ABCA8O94911 1581 aa35.29■■■■□ 3.24
PDLIM1-202ENST00000477757 GOLGA3Q08378 1498 aa35.26■■■■□ 3.23
PDLIM1-202ENST00000477757 KIF21BO75037 1637 aa35.17■■■■□ 3.22
PDLIM1-202ENST00000477757 KCNH8Q96L42 1107 aa35.12■■■■□ 3.21
PDLIM1-202ENST00000477757 ARAP3Q8WWN8 1544 aa35.1■■■■□ 3.21
PDLIM1-202ENST00000477757 PRXQ9BXM0 1461 aa35.01■■■■□ 3.19
PDLIM1-202ENST00000477757 ABCA9Q8IUA7 1624 aa34.97■■■■□ 3.19
PDLIM1-202ENST00000477757 ADAMTSL3P82987 1691 aa34.95■■■■□ 3.18
PDLIM1-202ENST00000477757 ATP10BO94823 1461 aa34.93■■■■□ 3.18
PDLIM1-202ENST00000477757 PHLDB1Q86UU1 1377 aa34.92■■■■□ 3.18
PDLIM1-202ENST00000477757 PTPRMP28827 1452 aa34.91■■■■□ 3.18
PDLIM1-202ENST00000477757 FBXO41Q8TF61 875 aa34.88■■■■□ 3.17
PDLIM1-202ENST00000477757 ARID3CA6NKF2 412 aa34.84■■■■□ 3.17
PDLIM1-202ENST00000477757 NEO1Q92859 1461 aa34.84■■■■□ 3.17
PDLIM1-202ENST00000477757 FRMPD1Q5SYB0 1578 aa34.81■■■■□ 3.16
PDLIM1-202ENST00000477757 FAM9AQ8IZU1 332 aaPredicted RBP34.8■■■■□ 3.16
PDLIM1-202ENST00000477757 SAMD9Q5K651 1589 aa34.79■■■■□ 3.16
PDLIM1-202ENST00000477757 BCORL1Q5H9F3 1711 aa34.79■■■■□ 3.16
PDLIM1-202ENST00000477757 RAPGEF6Q8TEU7 1601 aa34.77■■■■□ 3.16
PDLIM1-202ENST00000477757 RAPGEF3O95398 923 aa34.76■■■■□ 3.16
PDLIM1-202ENST00000477757 PCF11O94913 1555 aaKnown RBP34.75■■■■□ 3.15
PDLIM1-202ENST00000477757 MADDQ8WXG6 1647 aa34.75■■■■□ 3.15
PDLIM1-202ENST00000477757 P3H3Q8IVL6 736 aa34.74■■■■□ 3.15
PDLIM1-202ENST00000477757 LMTK3Q96Q04 1460 aa34.69■■■■□ 3.14
PDLIM1-202ENST00000477757 ARHGEF40Q8TER5 1519 aa34.69■■■■□ 3.14
PDLIM1-202ENST00000477757 NUP153P49790 1475 aaKnown RBP34.64■■■■□ 3.14
PDLIM1-202ENST00000477757 ARID4BQ4LE39 1312 aaPredicted RBP34.6■■■■□ 3.13
PDLIM1-202ENST00000477757 RICTORQ6R327 1708 aa34.58■■■■□ 3.13
PDLIM1-202ENST00000477757 RIMS1Q86UR5 1692 aaKnown RBP34.58■■■■□ 3.13
PDLIM1-202ENST00000477757 DENND4BO75064 1496 aaPredicted RBP34.55■■■■□ 3.12
PDLIM1-202ENST00000477757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.55■■■■□ 3.12
PDLIM1-202ENST00000477757 HNRNPUL2Q1KMD3 747 aaKnown RBP34.55■■■■□ 3.12
PDLIM1-202ENST00000477757 CFAP74Q9C0B2 1584 aa34.53■■■■□ 3.12
PDLIM1-202ENST00000477757 FHOD3Q2V2M9 1422 aa34.52■■■■□ 3.12
PDLIM1-202ENST00000477757 ZMYM4Q5VZL5 1548 aa34.5■■■■□ 3.11
PDLIM1-202ENST00000477757 AKNAQ7Z591 1439 aa34.48■■■■□ 3.11
PDLIM1-202ENST00000477757 FANCAO15360 1455 aa34.48■■■■□ 3.11
PDLIM1-202ENST00000477757 CSRNP3Q8WYN3 585 aa34.45■■■■□ 3.11
PDLIM1-202ENST00000477757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.44■■■■□ 3.14e-10■■□□□ 11.9
PDLIM1-202ENST00000477757 POGZQ7Z3K3 1410 aa34.43■■■■□ 3.1
PDLIM1-202ENST00000477757 ZFYVE16Q7Z3T8 1539 aa34.42■■■■□ 3.1
PDLIM1-202ENST00000477757 TTC37Q6PGP7 1564 aa34.41■■■■□ 3.1
PDLIM1-202ENST00000477757 EFCAB5A4FU69 1503 aa34.41■■■■□ 3.1
PDLIM1-202ENST00000477757 SIGLEC1Q9BZZ2 1709 aa34.41■■■■□ 3.1
PDLIM1-202ENST00000477757 PLEKHD1A6NEE1 506 aa34.39■■■■□ 3.1
PDLIM1-202ENST00000477757 YEATS2Q9ULM3 1422 aa34.37■■■■□ 3.09
PDLIM1-202ENST00000477757 MAGI2Q86UL8 1455 aa34.36■■■■□ 3.09
PDLIM1-202ENST00000477757 HSPA2P54652 639 aa34.35■■■■□ 3.09
PDLIM1-202ENST00000477757 HECW1Q76N89 1606 aa34.3■■■■□ 3.08
PDLIM1-202ENST00000477757 FER1L4A9Z1Z3 1794 aa34.3■■■■□ 3.08
PDLIM1-202ENST00000477757 EEA1Q15075 1411 aa34.3■■■■□ 3.08
PDLIM1-202ENST00000477757 RANGAP1P46060 587 aaPredicted RBP34.27■■■■□ 3.08
PDLIM1-202ENST00000477757 PLPPR3Q6T4P5 718 aa34.23■■■■□ 3.07
PDLIM1-202ENST00000477757 CDK13Q14004 1512 aaKnown RBP34.22■■■■□ 3.07
PDLIM1-202ENST00000477757 ARHGEF12Q9NZN5 1544 aa34.2■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms