RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 KIAA0586Q9BVV6 1533 aa37.77■■■■□ 3.64
SF1-214ENST00000477596 RAPGEF2Q9Y4G8 1499 aa37.77■■■■□ 3.64
SF1-214ENST00000477596 PRG4Q92954 1404 aaPredicted RBP37.75■■■■□ 3.63
SF1-214ENST00000477596 JPH4Q96JJ6 628 aa37.74■■■■□ 3.63
SF1-214ENST00000477596 CHIC1Q5VXU3 224 aa37.72■■■■□ 3.63
SF1-214ENST00000477596 PRXQ9BXM0 1461 aa37.64■■■■□ 3.62
SF1-214ENST00000477596 IQGAP2Q13576 1575 aa37.6■■■■□ 3.61
SF1-214ENST00000477596 EEA1Q15075 1411 aa37.53■■■■□ 3.6
SF1-214ENST00000477596 CSRNP3Q8WYN3 585 aa37.51■■■■□ 3.6
SF1-214ENST00000477596 FAM9AQ8IZU1 332 aaPredicted RBP37.49■■■■□ 3.59
SF1-214ENST00000477596 CTTNBP2Q8WZ74 1663 aa37.48■■■■□ 3.59
SF1-214ENST00000477596 UGGT2Q9NYU1 1516 aa37.38■■■■□ 3.57
SF1-214ENST00000477596 DISP1Q96F81 1524 aa37.36■■■■□ 3.57
SF1-214ENST00000477596 CARMIL2Q6F5E8 1435 aa37.34■■■■□ 3.57
SF1-214ENST00000477596 KIAA0556O60303 1618 aa37.28■■■■□ 3.56
SF1-214ENST00000477596 TTBK1Q5TCY1 1321 aaPredicted RBP37.26■■■■□ 3.56
SF1-214ENST00000477596 TNIKQ9UKE5 1360 aa37.25■■■■□ 3.55
SF1-214ENST00000477596 KIF21BO75037 1637 aa37.25■■■■□ 3.55
SF1-214ENST00000477596 ADCY10Q96PN6 1610 aa37.25■■■■□ 3.55
SF1-214ENST00000477596 PTPRGP23470 1445 aa37.24■■■■□ 3.55
SF1-214ENST00000477596 TRHP20396 242 aaPredicted RBP37.19■■■■□ 3.54
SF1-214ENST00000477596 GOLGA3Q08378 1498 aa37.1■■■■□ 3.53
SF1-214ENST00000477596 EHMT2Q96KQ7 1210 aa37.07■■■■□ 3.52
SF1-214ENST00000477596 UACAQ9BZF9 1416 aa37■■■■□ 3.51
SF1-214ENST00000477596 SAMD9Q5K651 1589 aa37■■■■□ 3.51
SF1-214ENST00000477596 ABCC2Q92887 1545 aa36.98■■■■□ 3.51
SF1-214ENST00000477596 UHRF1BP1LA0JNW5 1464 aa36.97■■■■□ 3.51
SF1-214ENST00000477596 MAPKBP1O60336 1514 aa36.95■■■■□ 3.51
SF1-214ENST00000477596 NPM1P06748 294 aaKnown RBP eCLIP36.95■■■■□ 3.51
SF1-214ENST00000477596 RANGAP1P46060 587 aaPredicted RBP36.94■■■■□ 3.5
SF1-214ENST00000477596 P3H3Q8IVL6 736 aa36.94■■■■□ 3.5
SF1-214ENST00000477596 PLB1Q6P1J6 1458 aa36.92■■■■□ 3.5
SF1-214ENST00000477596 KIF13AQ9H1H9 1805 aa36.88■■■■□ 3.49
SF1-214ENST00000477596 UBTFP17480 764 aaKnown RBP36.86■■■■□ 3.49
SF1-214ENST00000477596 ABCA8O94911 1581 aa36.86■■■■□ 3.49
SF1-214ENST00000477596 KDM5BQ9UGL1 1544 aa36.81■■■■□ 3.48
SF1-214ENST00000477596 ZCCHC11Q5TAX3 1644 aaKnown RBP36.81■■■■□ 3.48
SF1-214ENST00000477596 DIP2BQ9P265 1576 aa36.8■■■■□ 3.48
SF1-214ENST00000477596 FHOD3Q2V2M9 1422 aa36.8■■■■□ 3.48
SF1-214ENST00000477596 ABCC10Q5T3U5 1492 aa36.79■■■■□ 3.48
SF1-214ENST00000477596 EFCAB5A4FU69 1503 aa36.75■■■■□ 3.47
SF1-214ENST00000477596 ASXL2Q76L83 1435 aa36.75■■■■□ 3.47
SF1-214ENST00000477596 FAM69CQ0P6D2 419 aa36.7■■■■□ 3.47
SF1-214ENST00000477596 RAPGEF6Q8TEU7 1601 aa36.65■■■■□ 3.46
SF1-214ENST00000477596 ARHGAP35Q9NRY4 1499 aa36.62■■■■□ 3.45
SF1-214ENST00000477596 ARID3CA6NKF2 412 aa36.61■■■■□ 3.45
SF1-214ENST00000477596 WDR7Q9Y4E6 1490 aa36.54■■■■□ 3.44
SF1-214ENST00000477596 ATP10BO94823 1461 aa36.53■■■■□ 3.44
SF1-214ENST00000477596 EPRSP07814 1512 aaKnown RBP36.53■■■■□ 3.44
SF1-214ENST00000477596 NUP153P49790 1475 aaKnown RBP36.52■■■■□ 3.44
SF1-214ENST00000477596 TSPOAP1O95153 1857 aa36.51■■■■□ 3.44
SF1-214ENST00000477596 GLI2P10070 1586 aa36.5■■■■□ 3.43
SF1-214ENST00000477596 PPRC1Q5VV67 1664 aaKnown RBP36.4■■■■□ 3.42
SF1-214ENST00000477596 MAP3K4Q9Y6R4 1608 aa36.39■■■■□ 3.42
SF1-214ENST00000477596 FMN1Q68DA7 1419 aa36.37■■■■□ 3.41
SF1-214ENST00000477596 KCNH8Q96L42 1107 aa36.34■■■■□ 3.41
SF1-214ENST00000477596 CLIP1P30622 1438 aa36.34■■■■□ 3.41
SF1-214ENST00000477596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.32■■■■□ 3.4
SF1-214ENST00000477596 HNRNPUL2Q1KMD3 747 aaKnown RBP36.32■■■■□ 3.4
SF1-214ENST00000477596 CDK13Q14004 1512 aaKnown RBP36.31■■■■□ 3.4
SF1-214ENST00000477596 HECW1Q76N89 1606 aa36.29■■■■□ 3.4
SF1-214ENST00000477596 CFAP43Q8NDM7 1665 aa36.24■■■■□ 3.39
SF1-214ENST00000477596 PCF11O94913 1555 aaKnown RBP36.23■■■■□ 3.39
SF1-214ENST00000477596 ATP1B4Q9UN42 357 aaPredicted RBP36.22■■■■□ 3.39
SF1-214ENST00000477596 LOC105371045A0A1W2PR82 267 aa36.21■■■■□ 3.39
SF1-214ENST00000477596 KDM6BO15054 1643 aa36.21■■■■□ 3.39
SF1-214ENST00000477596 LRRIQ1Q96JM4 1722 aa36.19■■■■□ 3.38
SF1-214ENST00000477596 CEP162Q5TB80 1403 aa36.17■■■■□ 3.38
SF1-214ENST00000477596 CD109Q6YHK3 1445 aa36.17■■■■□ 3.38
SF1-214ENST00000477596 ABCA9Q8IUA7 1624 aa36.16■■■■□ 3.38
SF1-214ENST00000477596 TEX14Q8IWB6 1497 aa36.14■■■■□ 3.38
SF1-214ENST00000477596 CASKIN1Q8WXD9 1431 aa36.12■■■■□ 3.37
SF1-214ENST00000477596 MAGI3Q5TCQ9 1506 aa36.12■■■■□ 3.37
SF1-214ENST00000477596 PLEKHD1A6NEE1 506 aa36.1■■■■□ 3.37
SF1-214ENST00000477596 FYCO1Q9BQS8 1478 aa36.05■■■■□ 3.36
SF1-214ENST00000477596 COL17A1Q9UMD9 1497 aaPredicted RBP36.05■■■■□ 3.36
SF1-214ENST00000477596 TTC37Q6PGP7 1564 aa36.02■■■■□ 3.36
SF1-214ENST00000477596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.01■■■■□ 3.362e-6■□□□□ 11.2
SF1-214ENST00000477596 CCDC18Q5T9S5 1454 aa35.97■■■■□ 3.35
SF1-214ENST00000477596 KIF14Q15058 1648 aa35.94■■■■□ 3.34
SF1-214ENST00000477596 TROQ12816 1431 aaPredicted RBP35.91■■■■□ 3.34
SF1-214ENST00000477596 CDK11AQ9UQ88 783 aaPredicted RBP35.9■■■■□ 3.34
SF1-214ENST00000477596 NEO1Q92859 1461 aa35.82■■■■□ 3.32
SF1-214ENST00000477596 ARAP3Q8WWN8 1544 aa35.8■■■■□ 3.32
SF1-214ENST00000477596 FANCAO15360 1455 aa35.77■■■■□ 3.32
SF1-214ENST00000477596 MYO5CQ9NQX4 1742 aa35.76■■■■□ 3.31
SF1-214ENST00000477596 PHLDB1Q86UU1 1377 aa35.73■■■■□ 3.31
SF1-214ENST00000477596 PLCH2O75038 1416 aa35.73■■■■□ 3.31
SF1-214ENST00000477596 CFAP74Q9C0B2 1584 aa35.72■■■■□ 3.31
SF1-214ENST00000477596 VPS8Q8N3P4 1428 aa35.72■■■■□ 3.31
SF1-214ENST00000477596 FRMPD1Q5SYB0 1578 aa35.69■■■■□ 3.3
SF1-214ENST00000477596 AKNAQ7Z591 1439 aa35.69■■■■□ 3.3
SF1-214ENST00000477596 RAPGEF3O95398 923 aa35.65■■■■□ 3.3
SF1-214ENST00000477596 ARHGAP5Q13017 1502 aa35.62■■■■□ 3.29
SF1-214ENST00000477596 CDC42BPBQ9Y5S2 1711 aa35.61■■■■□ 3.29
SF1-214ENST00000477596 PREX2Q70Z35 1606 aa35.61■■■■□ 3.29
SF1-214ENST00000477596 MTUS2Q5JR59 1369 aa35.6■■■■□ 3.29
SF1-214ENST00000477596 RICTORQ6R327 1708 aa35.6■■■■□ 3.29
SF1-214ENST00000477596 DENND4BO75064 1496 aaPredicted RBP35.58■■■■□ 3.29
SF1-214ENST00000477596 ADGRL1O94910 1474 aa35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms