RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
CCNL1-217ENST00000476367 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.43
CCNL1-217ENST00000476367 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
CCNL1-217ENST00000476367 KIAA0586Q9BVV6 1533 aa23.88■■□□□ 1.41
CCNL1-217ENST00000476367 CTTNBP2Q8WZ74 1663 aa23.88■■□□□ 1.41
CCNL1-217ENST00000476367 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
CCNL1-217ENST00000476367 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
CCNL1-217ENST00000476367 KIF21BO75037 1637 aa23.82■■□□□ 1.4
CCNL1-217ENST00000476367 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
CCNL1-217ENST00000476367 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
CCNL1-217ENST00000476367 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
CCNL1-217ENST00000476367 CYB5RLQ6IPT4 315 aa23.71■■□□□ 1.39
CCNL1-217ENST00000476367 EHMT2Q96KQ7 1210 aa23.71■■□□□ 1.39
CCNL1-217ENST00000476367 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
CCNL1-217ENST00000476367 UGGT2Q9NYU1 1516 aa23.67■■□□□ 1.38
CCNL1-217ENST00000476367 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
CCNL1-217ENST00000476367 KIAA0556O60303 1618 aa23.63■■□□□ 1.37
CCNL1-217ENST00000476367 DISP1Q96F81 1524 aa23.62■■□□□ 1.37
CCNL1-217ENST00000476367 UBTFP17480 764 aaKnown RBP23.57■■□□□ 1.36
CCNL1-217ENST00000476367 LOC105371045A0A1W2PR82 267 aa23.56■■□□□ 1.36
CCNL1-217ENST00000476367 TTBK1Q5TCY1 1321 aaPredicted RBP23.56■■□□□ 1.36
CCNL1-217ENST00000476367 TNIKQ9UKE5 1360 aa23.53■■□□□ 1.36
CCNL1-217ENST00000476367 RANGAP1P46060 587 aaPredicted RBP23.52■■□□□ 1.36
CCNL1-217ENST00000476367 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
CCNL1-217ENST00000476367 PTPRGP23470 1445 aa23.5■■□□□ 1.35
CCNL1-217ENST00000476367 ADCY10Q96PN6 1610 aa23.46■■□□□ 1.35
CCNL1-217ENST00000476367 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
CCNL1-217ENST00000476367 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
CCNL1-217ENST00000476367 FHOD3Q2V2M9 1422 aa23.38■■□□□ 1.33
CCNL1-217ENST00000476367 UACAQ9BZF9 1416 aa23.36■■□□□ 1.33
CCNL1-217ENST00000476367 ABCC2Q92887 1545 aa23.35■■□□□ 1.33
CCNL1-217ENST00000476367 PLB1Q6P1J6 1458 aa23.35■■□□□ 1.33
CCNL1-217ENST00000476367 ARHGAP35Q9NRY4 1499 aa23.34■■□□□ 1.33
CCNL1-217ENST00000476367 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
CCNL1-217ENST00000476367 ABCA8O94911 1581 aa23.32■■□□□ 1.32
CCNL1-217ENST00000476367 UHRF1BP1LA0JNW5 1464 aa23.32■■□□□ 1.32
CCNL1-217ENST00000476367 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
CCNL1-217ENST00000476367 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
CCNL1-217ENST00000476367 NPM1P06748 294 aaKnown RBP eCLIP23.26■■□□□ 1.31
CCNL1-217ENST00000476367 ZCCHC11Q5TAX3 1644 aaKnown RBP23.26■■□□□ 1.31
CCNL1-217ENST00000476367 CLIP1P30622 1438 aa23.24■■□□□ 1.31
CCNL1-217ENST00000476367 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
CCNL1-217ENST00000476367 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
CCNL1-217ENST00000476367 TRHP20396 242 aaPredicted RBP23.19■■□□□ 1.3
CCNL1-217ENST00000476367 FMN1Q68DA7 1419 aa23.17■■□□□ 1.3
CCNL1-217ENST00000476367 ARID3CA6NKF2 412 aa23.17■■□□□ 1.3
CCNL1-217ENST00000476367 KIF13AQ9H1H9 1805 aa23.15■■□□□ 1.3
CCNL1-217ENST00000476367 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
CCNL1-217ENST00000476367 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
CCNL1-217ENST00000476367 HECW1Q76N89 1606 aa23.12■■□□□ 1.29
CCNL1-217ENST00000476367 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
CCNL1-217ENST00000476367 DIP2BQ9P265 1576 aa23.11■■□□□ 1.29
CCNL1-217ENST00000476367 ATP10BO94823 1461 aa23.09■■□□□ 1.29
CCNL1-217ENST00000476367 ABCC10Q5T3U5 1492 aa23.08■■□□□ 1.29
CCNL1-217ENST00000476367 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
CCNL1-217ENST00000476367 WDR7Q9Y4E6 1490 aa23.06■■□□□ 1.28
CCNL1-217ENST00000476367 LRRIQ1Q96JM4 1722 aa23.06■■□□□ 1.28
CCNL1-217ENST00000476367 CDK13Q14004 1512 aaKnown RBP23.05■■□□□ 1.28
CCNL1-217ENST00000476367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.04■■□□□ 1.28
CCNL1-217ENST00000476367 HNRNPUL2Q1KMD3 747 aaKnown RBP23.04■■□□□ 1.28
CCNL1-217ENST00000476367 CASKIN1Q8WXD9 1431 aa23.01■■□□□ 1.27
CCNL1-217ENST00000476367 EPRSP07814 1512 aaKnown RBP23.01■■□□□ 1.27
CCNL1-217ENST00000476367 FAM69CQ0P6D2 419 aa23■■□□□ 1.27
CCNL1-217ENST00000476367 FYCO1Q9BQS8 1478 aa23■■□□□ 1.27
CCNL1-217ENST00000476367 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
CCNL1-217ENST00000476367 GLI2P10070 1586 aa22.96■■□□□ 1.27
CCNL1-217ENST00000476367 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.26
CCNL1-217ENST00000476367 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
CCNL1-217ENST00000476367 KCNH8Q96L42 1107 aa22.93■■□□□ 1.26
CCNL1-217ENST00000476367 MAP3K4Q9Y6R4 1608 aa22.92■■□□□ 1.26
CCNL1-217ENST00000476367 CFAP43Q8NDM7 1665 aa22.89■■□□□ 1.26
CCNL1-217ENST00000476367 PPRC1Q5VV67 1664 aaKnown RBP22.87■■□□□ 1.25
CCNL1-217ENST00000476367 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
CCNL1-217ENST00000476367 ABCA9Q8IUA7 1624 aa22.86■■□□□ 1.25
CCNL1-217ENST00000476367 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
CCNL1-217ENST00000476367 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
CCNL1-217ENST00000476367 TTC37Q6PGP7 1564 aa22.82■■□□□ 1.24
CCNL1-217ENST00000476367 KIF14Q15058 1648 aa22.81■■□□□ 1.24
CCNL1-217ENST00000476367 TROQ12816 1431 aaPredicted RBP22.8■■□□□ 1.24
CCNL1-217ENST00000476367 CD109Q6YHK3 1445 aa22.79■■□□□ 1.24
CCNL1-217ENST00000476367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.79■■□□□ 1.242e-6■■□□□ 13.5
CCNL1-217ENST00000476367 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
CCNL1-217ENST00000476367 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
CCNL1-217ENST00000476367 MYO5CQ9NQX4 1742 aa22.72■■□□□ 1.23
CCNL1-217ENST00000476367 KDM6BO15054 1643 aa22.72■■□□□ 1.23
CCNL1-217ENST00000476367 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
CCNL1-217ENST00000476367 EHBP1L1Q8N3D4 1523 aa22.71■■□□□ 1.23
CCNL1-217ENST00000476367 MTUS2Q5JR59 1369 aa22.71■■□□□ 1.23
CCNL1-217ENST00000476367 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
CCNL1-217ENST00000476367 CFAP74Q9C0B2 1584 aa22.64■■□□□ 1.21
CCNL1-217ENST00000476367 CDC42BPAQ5VT25 1732 aa22.63■■□□□ 1.21
CCNL1-217ENST00000476367 PREX2Q70Z35 1606 aa22.63■■□□□ 1.21
CCNL1-217ENST00000476367 LRRC9Q6ZRR7 1453 aa22.63■■□□□ 1.21
CCNL1-217ENST00000476367 FANCAO15360 1455 aa22.62■■□□□ 1.21
CCNL1-217ENST00000476367 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
CCNL1-217ENST00000476367 CDC42BPBQ9Y5S2 1711 aa22.62■■□□□ 1.21
CCNL1-217ENST00000476367 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
CCNL1-217ENST00000476367 NEO1Q92859 1461 aa22.6■■□□□ 1.21
CCNL1-217ENST00000476367 PLCH2O75038 1416 aa22.6■■□□□ 1.21
CCNL1-217ENST00000476367 APLP2Q06481 763 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms