RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
TMCO1-205ENST00000476143 JPH4Q96JJ6 628 aa23.46■■□□□ 1.35
TMCO1-205ENST00000476143 ERCC6L2Q5T890 1561 aa23.45■■□□□ 1.34
TMCO1-205ENST00000476143 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
TMCO1-205ENST00000476143 KIAA0586Q9BVV6 1533 aa23.43■■□□□ 1.34
TMCO1-205ENST00000476143 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
TMCO1-205ENST00000476143 IQGAP2Q13576 1575 aa23.27■■□□□ 1.32
TMCO1-205ENST00000476143 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
TMCO1-205ENST00000476143 NPM1P06748 294 aaKnown RBP eCLIP23.24■■□□□ 1.31
TMCO1-205ENST00000476143 PTPRGP23470 1445 aa23.16■■□□□ 1.3
TMCO1-205ENST00000476143 CTTNBP2Q8WZ74 1663 aa23.16■■□□□ 1.3
TMCO1-205ENST00000476143 TNIKQ9UKE5 1360 aa23.15■■□□□ 1.3
TMCO1-205ENST00000476143 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
TMCO1-205ENST00000476143 EEA1Q15075 1411 aa23.1■■□□□ 1.29
TMCO1-205ENST00000476143 UGGT2Q9NYU1 1516 aa23.1■■□□□ 1.29
TMCO1-205ENST00000476143 ADCY10Q96PN6 1610 aa23.1■■□□□ 1.29
TMCO1-205ENST00000476143 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
TMCO1-205ENST00000476143 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
TMCO1-205ENST00000476143 MAPKBP1O60336 1514 aa23.06■■□□□ 1.28
TMCO1-205ENST00000476143 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
TMCO1-205ENST00000476143 KIAA0556O60303 1618 aa23.04■■□□□ 1.28
TMCO1-205ENST00000476143 DISP1Q96F81 1524 aa23.04■■□□□ 1.28
TMCO1-205ENST00000476143 FAM9AQ8IZU1 332 aaPredicted RBP23.01■■□□□ 1.27
TMCO1-205ENST00000476143 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
TMCO1-205ENST00000476143 UACAQ9BZF9 1416 aa22.99■■□□□ 1.27
TMCO1-205ENST00000476143 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
TMCO1-205ENST00000476143 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
TMCO1-205ENST00000476143 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
TMCO1-205ENST00000476143 UHRF1BP1LA0JNW5 1464 aa22.96■■□□□ 1.27
TMCO1-205ENST00000476143 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
TMCO1-205ENST00000476143 PLB1Q6P1J6 1458 aa22.89■■□□□ 1.25
TMCO1-205ENST00000476143 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
TMCO1-205ENST00000476143 ASXL2Q76L83 1435 aa22.84■■□□□ 1.25
TMCO1-205ENST00000476143 KDM5BQ9UGL1 1544 aa22.84■■□□□ 1.25
TMCO1-205ENST00000476143 KIF21BO75037 1637 aa22.84■■□□□ 1.25
TMCO1-205ENST00000476143 ZCCHC11Q5TAX3 1644 aaKnown RBP22.82■■□□□ 1.24
TMCO1-205ENST00000476143 TSPOAP1O95153 1857 aa22.79■■□□□ 1.24
TMCO1-205ENST00000476143 ABCA8O94911 1581 aa22.77■■□□□ 1.24
TMCO1-205ENST00000476143 SAMD9Q5K651 1589 aa22.77■■□□□ 1.24
TMCO1-205ENST00000476143 P3H3Q8IVL6 736 aa22.77■■□□□ 1.24
TMCO1-205ENST00000476143 GLI2P10070 1586 aa22.76■■□□□ 1.23
TMCO1-205ENST00000476143 RANGAP1P46060 587 aaPredicted RBP22.74■■□□□ 1.23
TMCO1-205ENST00000476143 UBTFP17480 764 aaKnown RBP22.71■■□□□ 1.23
TMCO1-205ENST00000476143 WDR7Q9Y4E6 1490 aa22.71■■□□□ 1.23
TMCO1-205ENST00000476143 KDM6BO15054 1643 aa22.71■■□□□ 1.23
TMCO1-205ENST00000476143 EPRSP07814 1512 aaKnown RBP22.7■■□□□ 1.22
TMCO1-205ENST00000476143 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
TMCO1-205ENST00000476143 RAPGEF6Q8TEU7 1601 aa22.66■■□□□ 1.22
TMCO1-205ENST00000476143 EHMT2Q96KQ7 1210 aa22.65■■□□□ 1.22
TMCO1-205ENST00000476143 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
TMCO1-205ENST00000476143 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.21
TMCO1-205ENST00000476143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
TMCO1-205ENST00000476143 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
TMCO1-205ENST00000476143 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
TMCO1-205ENST00000476143 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
TMCO1-205ENST00000476143 KCNH8Q96L42 1107 aa22.6■■□□□ 1.21
TMCO1-205ENST00000476143 PPRC1Q5VV67 1664 aaKnown RBP22.58■■□□□ 1.21
TMCO1-205ENST00000476143 CFAP43Q8NDM7 1665 aa22.58■■□□□ 1.21
TMCO1-205ENST00000476143 ATP10BO94823 1461 aa22.57■■□□□ 1.2
TMCO1-205ENST00000476143 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
TMCO1-205ENST00000476143 NUP153P49790 1475 aaKnown RBP22.5■■□□□ 1.19
TMCO1-205ENST00000476143 FMN1Q68DA7 1419 aa22.49■■□□□ 1.19
TMCO1-205ENST00000476143 MAGI3Q5TCQ9 1506 aa22.49■■□□□ 1.19
TMCO1-205ENST00000476143 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
TMCO1-205ENST00000476143 ARHGAP35Q9NRY4 1499 aa22.44■■□□□ 1.18
TMCO1-205ENST00000476143 ABCA9Q8IUA7 1624 aa22.43■■□□□ 1.18
TMCO1-205ENST00000476143 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
TMCO1-205ENST00000476143 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
TMCO1-205ENST00000476143 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
TMCO1-205ENST00000476143 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
TMCO1-205ENST00000476143 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
TMCO1-205ENST00000476143 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
TMCO1-205ENST00000476143 NEO1Q92859 1461 aa22.3■■□□□ 1.16
TMCO1-205ENST00000476143 ARAP3Q8WWN8 1544 aa22.29■■□□□ 1.16
TMCO1-205ENST00000476143 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
TMCO1-205ENST00000476143 CLIP1P30622 1438 aa22.27■■□□□ 1.16
TMCO1-205ENST00000476143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.25■■□□□ 1.153e-8■■■□□ 16.7
TMCO1-205ENST00000476143 CCDC18Q5T9S5 1454 aa22.24■■□□□ 1.15
TMCO1-205ENST00000476143 CASKIN1Q8WXD9 1431 aa22.23■■□□□ 1.15
TMCO1-205ENST00000476143 PCF11O94913 1555 aaKnown RBP22.22■■□□□ 1.15
TMCO1-205ENST00000476143 KIF14Q15058 1648 aa22.22■■□□□ 1.15
TMCO1-205ENST00000476143 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
TMCO1-205ENST00000476143 FANCAO15360 1455 aa22.21■■□□□ 1.15
TMCO1-205ENST00000476143 FYCO1Q9BQS8 1478 aa22.19■■□□□ 1.14
TMCO1-205ENST00000476143 TROQ12816 1431 aaPredicted RBP22.18■■□□□ 1.14
TMCO1-205ENST00000476143 MYO5CQ9NQX4 1742 aa22.17■■□□□ 1.14
TMCO1-205ENST00000476143 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
TMCO1-205ENST00000476143 AKNAQ7Z591 1439 aa22.17■■□□□ 1.14
TMCO1-205ENST00000476143 KDM4FA0A1W2PPD8 638 aa22.17■■□□□ 1.14
TMCO1-205ENST00000476143 LRRIQ1Q96JM4 1722 aa22.16■■□□□ 1.14
TMCO1-205ENST00000476143 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
TMCO1-205ENST00000476143 RAPGEF3O95398 923 aa22.14■■□□□ 1.13
TMCO1-205ENST00000476143 PLCH2O75038 1416 aa22.14■■□□□ 1.13
TMCO1-205ENST00000476143 EFCAB2Q5VUJ9 269 aa22.11■■□□□ 1.13
TMCO1-205ENST00000476143 CEP162Q5TB80 1403 aa22.08■■□□□ 1.13
TMCO1-205ENST00000476143 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
TMCO1-205ENST00000476143 RICTORQ6R327 1708 aa22.08■■□□□ 1.12
TMCO1-205ENST00000476143 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
TMCO1-205ENST00000476143 SCAPERQ9BY12 1400 aa22.04■■□□□ 1.12
TMCO1-205ENST00000476143 ARID4BQ4LE39 1312 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms