RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 RIMBP3BA6NNM3 1639 aa37.99■■■■□ 3.67
YIF1A-206ENST00000474986 RIMBP3Q9UFD9 1639 aa37.99■■■■□ 3.67
YIF1A-206ENST00000474986 SHROOM2Q13796 1616 aa37.93■■■■□ 3.66
YIF1A-206ENST00000474986 FAM9AQ8IZU1 332 aaPredicted RBP37.92■■■■□ 3.66
YIF1A-206ENST00000474986 JPH4Q96JJ6 628 aa37.9■■■■□ 3.66
YIF1A-206ENST00000474986 PRG4Q92954 1404 aaPredicted RBP37.78■■■■□ 3.64
YIF1A-206ENST00000474986 ARAP1Q96P48 1450 aa37.78■■■■□ 3.64
YIF1A-206ENST00000474986 IQGAP2Q13576 1575 aa37.78■■■■□ 3.64
YIF1A-206ENST00000474986 KIF21BO75037 1637 aa37.74■■■■□ 3.63
YIF1A-206ENST00000474986 ERCC6L2Q5T890 1561 aa37.72■■■■□ 3.63
YIF1A-206ENST00000474986 CYB5RLQ6IPT4 315 aa37.68■■■■□ 3.62
YIF1A-206ENST00000474986 CTTNBP2Q8WZ74 1663 aa37.66■■■■□ 3.62
YIF1A-206ENST00000474986 UGGT2Q9NYU1 1516 aa37.63■■■■□ 3.61
YIF1A-206ENST00000474986 CARMIL2Q6F5E8 1435 aa37.6■■■■□ 3.61
YIF1A-206ENST00000474986 GOLGA3Q08378 1498 aa37.56■■■■□ 3.6
YIF1A-206ENST00000474986 DISP1Q96F81 1524 aa37.51■■■■□ 3.6
YIF1A-206ENST00000474986 TNIKQ9UKE5 1360 aa37.45■■■■□ 3.59
YIF1A-206ENST00000474986 KIAA0556O60303 1618 aa37.41■■■■□ 3.58
YIF1A-206ENST00000474986 UBTFP17480 764 aaKnown RBP37.41■■■■□ 3.58
YIF1A-206ENST00000474986 PTPRGP23470 1445 aa37.39■■■■□ 3.58
YIF1A-206ENST00000474986 EHMT2Q96KQ7 1210 aa37.33■■■■□ 3.57
YIF1A-206ENST00000474986 SAMD9Q5K651 1589 aa37.25■■■■□ 3.55
YIF1A-206ENST00000474986 EFCAB5A4FU69 1503 aa37.19■■■■□ 3.54
YIF1A-206ENST00000474986 TTBK1Q5TCY1 1321 aaPredicted RBP37.18■■■■□ 3.54
YIF1A-206ENST00000474986 UACAQ9BZF9 1416 aa37.16■■■■□ 3.54
YIF1A-206ENST00000474986 RANGAP1P46060 587 aaPredicted RBP37.14■■■■□ 3.54
YIF1A-206ENST00000474986 ADCY10Q96PN6 1610 aa37.14■■■■□ 3.54
YIF1A-206ENST00000474986 UHRF1BP1LA0JNW5 1464 aa37.13■■■■□ 3.54
YIF1A-206ENST00000474986 P3H3Q8IVL6 736 aa37.12■■■■□ 3.53
YIF1A-206ENST00000474986 ABCC2Q92887 1545 aa37.07■■■■□ 3.53
YIF1A-206ENST00000474986 NPM1P06748 294 aaKnown RBP eCLIP37.06■■■■□ 3.52
YIF1A-206ENST00000474986 FHOD3Q2V2M9 1422 aa37.03■■■■□ 3.52
YIF1A-206ENST00000474986 PLB1Q6P1J6 1458 aa37.01■■■■□ 3.52
YIF1A-206ENST00000474986 ARHGAP35Q9NRY4 1499 aa37.01■■■■□ 3.51
YIF1A-206ENST00000474986 ABCA8O94911 1581 aa37■■■■□ 3.51
YIF1A-206ENST00000474986 KDM5BQ9UGL1 1544 aa36.94■■■■□ 3.5
YIF1A-206ENST00000474986 MAPKBP1O60336 1514 aa36.92■■■■□ 3.5
YIF1A-206ENST00000474986 CLIP1P30622 1438 aa36.88■■■■□ 3.49
YIF1A-206ENST00000474986 LOC105371045A0A1W2PR82 267 aa36.88■■■■□ 3.49
YIF1A-206ENST00000474986 FMN1Q68DA7 1419 aa36.86■■■■□ 3.49
YIF1A-206ENST00000474986 TRHP20396 242 aaPredicted RBP36.84■■■■□ 3.49
YIF1A-206ENST00000474986 RAPGEF6Q8TEU7 1601 aa36.82■■■■□ 3.49
YIF1A-206ENST00000474986 ZCCHC11Q5TAX3 1644 aaKnown RBP36.77■■■■□ 3.48
YIF1A-206ENST00000474986 CEP162Q5TB80 1403 aa36.77■■■■□ 3.48
YIF1A-206ENST00000474986 ASXL2Q76L83 1435 aa36.75■■■■□ 3.47
YIF1A-206ENST00000474986 NUP153P49790 1475 aaKnown RBP36.73■■■■□ 3.47
YIF1A-206ENST00000474986 ABCC10Q5T3U5 1492 aa36.72■■■■□ 3.47
YIF1A-206ENST00000474986 ATP10BO94823 1461 aa36.71■■■■□ 3.47
YIF1A-206ENST00000474986 WDR7Q9Y4E6 1490 aa36.62■■■■□ 3.45
YIF1A-206ENST00000474986 DIP2BQ9P265 1576 aa36.62■■■■□ 3.45
YIF1A-206ENST00000474986 ARID3CA6NKF2 412 aa36.6■■■■□ 3.45
YIF1A-206ENST00000474986 HECW1Q76N89 1606 aa36.59■■■■□ 3.45
YIF1A-206ENST00000474986 FAM69CQ0P6D2 419 aa36.59■■■■□ 3.45
YIF1A-206ENST00000474986 CASKIN1Q8WXD9 1431 aa36.58■■■■□ 3.45
YIF1A-206ENST00000474986 KIF13AQ9H1H9 1805 aa36.54■■■■□ 3.44
YIF1A-206ENST00000474986 EPRSP07814 1512 aaKnown RBP36.54■■■■□ 3.44
YIF1A-206ENST00000474986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.53■■■■□ 3.44
YIF1A-206ENST00000474986 HNRNPUL2Q1KMD3 747 aaKnown RBP36.53■■■■□ 3.44
YIF1A-206ENST00000474986 GLI2P10070 1586 aa36.52■■■■□ 3.44
YIF1A-206ENST00000474986 FYCO1Q9BQS8 1478 aa36.51■■■■□ 3.44
YIF1A-206ENST00000474986 ATP1B4Q9UN42 357 aaPredicted RBP36.51■■■■□ 3.44
YIF1A-206ENST00000474986 PCF11O94913 1555 aaKnown RBP36.49■■■■□ 3.43
YIF1A-206ENST00000474986 CDK13Q14004 1512 aaKnown RBP36.45■■■■□ 3.43
YIF1A-206ENST00000474986 PLEKHD1A6NEE1 506 aa36.44■■■■□ 3.42
YIF1A-206ENST00000474986 CCDC18Q5T9S5 1454 aa36.42■■■■□ 3.42
YIF1A-206ENST00000474986 KCNH8Q96L42 1107 aa36.4■■■■□ 3.42
YIF1A-206ENST00000474986 CDK11AQ9UQ88 783 aaPredicted RBP36.39■■■■□ 3.42
YIF1A-206ENST00000474986 VPS8Q8N3P4 1428 aa36.34■■■■□ 3.41
YIF1A-206ENST00000474986 MAP3K4Q9Y6R4 1608 aa36.3■■■■□ 3.4
YIF1A-206ENST00000474986 LRRIQ1Q96JM4 1722 aa36.29■■■■□ 3.4
YIF1A-206ENST00000474986 CFAP43Q8NDM7 1665 aa36.26■■■■□ 3.39
YIF1A-206ENST00000474986 TROQ12816 1431 aaPredicted RBP36.25■■■■□ 3.39
YIF1A-206ENST00000474986 CD109Q6YHK3 1445 aa36.25■■■■□ 3.39
YIF1A-206ENST00000474986 ABCA9Q8IUA7 1624 aa36.23■■■■□ 3.39
YIF1A-206ENST00000474986 MAGI3Q5TCQ9 1506 aa36.2■■■■□ 3.39
YIF1A-206ENST00000474986 TEX14Q8IWB6 1497 aa36.19■■■■□ 3.38
YIF1A-206ENST00000474986 PPRC1Q5VV67 1664 aaKnown RBP36.16■■■■□ 3.38
YIF1A-206ENST00000474986 TSPOAP1O95153 1857 aa36.16■■■■□ 3.38
YIF1A-206ENST00000474986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.13■■■■□ 3.381e-7■■■■□ 23.3
YIF1A-206ENST00000474986 KIF14Q15058 1648 aa36.1■■■■□ 3.37
YIF1A-206ENST00000474986 MTUS2Q5JR59 1369 aa36.05■■■■□ 3.36
YIF1A-206ENST00000474986 TTC37Q6PGP7 1564 aa36.05■■■■□ 3.36
YIF1A-206ENST00000474986 MAP3K1Q13233 1512 aa36.03■■■■□ 3.36
YIF1A-206ENST00000474986 TIAM1Q13009 1591 aa36.02■■■■□ 3.36
YIF1A-206ENST00000474986 PHLDB1Q86UU1 1377 aa36.01■■■■□ 3.35
YIF1A-206ENST00000474986 EHBP1L1Q8N3D4 1523 aa35.98■■■■□ 3.35
YIF1A-206ENST00000474986 PLCH2O75038 1416 aa35.98■■■■□ 3.35
YIF1A-206ENST00000474986 NEO1Q92859 1461 aa35.97■■■■□ 3.35
YIF1A-206ENST00000474986 ARAP3Q8WWN8 1544 aa35.95■■■■□ 3.35
YIF1A-206ENST00000474986 KDM6BO15054 1643 aa35.94■■■■□ 3.34
YIF1A-206ENST00000474986 APLP2Q06481 763 aa35.91■■■■□ 3.34
YIF1A-206ENST00000474986 FANCAO15360 1455 aa35.9■■■■□ 3.34
YIF1A-206ENST00000474986 LRRC9Q6ZRR7 1453 aa35.88■■■■□ 3.33
YIF1A-206ENST00000474986 CFAP74Q9C0B2 1584 aa35.87■■■■□ 3.33
YIF1A-206ENST00000474986 MYO5CQ9NQX4 1742 aa35.87■■■■□ 3.33
YIF1A-206ENST00000474986 COL17A1Q9UMD9 1497 aaPredicted RBP35.86■■■■□ 3.33
YIF1A-206ENST00000474986 EFCAB2Q5VUJ9 269 aa35.85■■■■□ 3.33
YIF1A-206ENST00000474986 AKNAQ7Z591 1439 aa35.83■■■■□ 3.33
YIF1A-206ENST00000474986 CCNB3Q8WWL7 1395 aa35.79■■■■□ 3.32
YIF1A-206ENST00000474986 PREX2Q70Z35 1606 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms