RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ERCC6Q03468 1493 aa33.22■■■□□ 2.91
CCM2-206ENST00000474617 GRIN2BQ13224 1484 aa33.19■■■□□ 2.9
CCM2-206ENST00000474617 AQRO60306 1485 aaKnown RBP eCLIP33.14■■■□□ 2.97e-7■■■■■ 33.7
CCM2-206ENST00000474617 THOC2Q8NI27 1593 aaKnown RBP33.12■■■□□ 2.89
CCM2-206ENST00000474617 ADAMTS12P58397 1594 aa33.11■■■□□ 2.89
CCM2-206ENST00000474617 TTBK1Q5TCY1 1321 aaPredicted RBP33.05■■■□□ 2.88
CCM2-206ENST00000474617 FMN1Q68DA7 1419 aa33.05■■■□□ 2.88
CCM2-206ENST00000474617 SAMD9Q5K651 1589 aa33.05■■■□□ 2.88
CCM2-206ENST00000474617 FYCO1Q9BQS8 1478 aa33.04■■■□□ 2.88
CCM2-206ENST00000474617 TIAM1Q13009 1591 aa33.04■■■□□ 2.88
CCM2-206ENST00000474617 CASKIN1Q8WXD9 1431 aa32.99■■■□□ 2.87
CCM2-206ENST00000474617 CFAP43Q8NDM7 1665 aa32.96■■■□□ 2.87
CCM2-206ENST00000474617 RRBP1Q9P2E9 1410 aaKnown RBP32.94■■■□□ 2.86
CCM2-206ENST00000474617 PCF11O94913 1555 aaKnown RBP32.93■■■□□ 2.86
CCM2-206ENST00000474617 FHOD3Q2V2M9 1422 aa32.91■■■□□ 2.86
CCM2-206ENST00000474617 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
CCM2-206ENST00000474617 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
CCM2-206ENST00000474617 MAGI1Q96QZ7 1491 aaPredicted RBP32.89■■■□□ 2.86
CCM2-206ENST00000474617 IQGAP2Q13576 1575 aa32.89■■■□□ 2.86
CCM2-206ENST00000474617 KANK4Q5T7N3 995 aaPredicted RBP32.88■■■□□ 2.85
CCM2-206ENST00000474617 LRRC9Q6ZRR7 1453 aa32.88■■■□□ 2.85
CCM2-206ENST00000474617 CCER1Q8TC90 406 aaPredicted RBP32.87■■■□□ 2.85
CCM2-206ENST00000474617 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
CCM2-206ENST00000474617 UGGT2Q9NYU1 1516 aa32.78■■■□□ 2.84
CCM2-206ENST00000474617 KIAA0586Q9BVV6 1533 aa32.77■■■□□ 2.84
CCM2-206ENST00000474617 CCNB3Q8WWL7 1395 aa32.75■■■□□ 2.83
CCM2-206ENST00000474617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.75■■■□□ 2.83
CCM2-206ENST00000474617 GRIN2AQ12879 1464 aa32.75■■■□□ 2.83
CCM2-206ENST00000474617 P3H3Q8IVL6 736 aa32.72■■■□□ 2.83
CCM2-206ENST00000474617 SYNJ2O15056 1496 aa32.72■■■□□ 2.83
CCM2-206ENST00000474617 CCDC18Q5T9S5 1454 aa32.66■■■□□ 2.82
CCM2-206ENST00000474617 HNRNPUL2Q1KMD3 747 aaKnown RBP32.65■■■□□ 2.82
CCM2-206ENST00000474617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.62■■■□□ 2.81
CCM2-206ENST00000474617 HECW1Q76N89 1606 aa32.6■■■□□ 2.81
CCM2-206ENST00000474617 CLSPNQ9HAW4 1339 aa32.55■■■□□ 2.8
CCM2-206ENST00000474617 EHBP1L1Q8N3D4 1523 aa32.52■■■□□ 2.8
CCM2-206ENST00000474617 ATP1B4Q9UN42 357 aaPredicted RBP32.52■■■□□ 2.8
CCM2-206ENST00000474617 KIAA0556O60303 1618 aa32.52■■■□□ 2.8
CCM2-206ENST00000474617 CHMP7Q8WUX9 453 aaPredicted RBP32.51■■■□□ 2.8
CCM2-206ENST00000474617 NUP160Q12769 1436 aa32.51■■■□□ 2.79
CCM2-206ENST00000474617 PHLDB1Q86UU1 1377 aa32.5■■■□□ 2.79
CCM2-206ENST00000474617 MTUS2Q5JR59 1369 aa32.49■■■□□ 2.79
CCM2-206ENST00000474617 DISP1Q96F81 1524 aa32.46■■■□□ 2.79
CCM2-206ENST00000474617 CEP170Q5SW79 1584 aa32.44■■■□□ 2.78
CCM2-206ENST00000474617 LRRIQ1Q96JM4 1722 aa32.44■■■□□ 2.78
CCM2-206ENST00000474617 SUPT6HQ7KZ85 1726 aaKnown RBP32.43■■■□□ 2.78
CCM2-206ENST00000474617 EPRSP07814 1512 aaKnown RBP32.38■■■□□ 2.77
CCM2-206ENST00000474617 CARMIL2Q6F5E8 1435 aa32.38■■■□□ 2.77
CCM2-206ENST00000474617 FGD6Q6ZV73 1430 aa32.35■■■□□ 2.77
CCM2-206ENST00000474617 ARHGEF11O15085 1522 aa32.34■■■□□ 2.77
CCM2-206ENST00000474617 NCOA2Q15596 1464 aa32.32■■■□□ 2.76
CCM2-206ENST00000474617 MYOM3Q5VTT5 1437 aa32.3■■■□□ 2.76
CCM2-206ENST00000474617 RAPGEF6Q8TEU7 1601 aa32.28■■■□□ 2.76
CCM2-206ENST00000474617 DHX57Q6P158 1386 aaKnown RBP32.24■■■□□ 2.75
CCM2-206ENST00000474617 SETD5Q9C0A6 1442 aa32.23■■■□□ 2.75
CCM2-206ENST00000474617 FBLN2P98095 1184 aa32.21■■■□□ 2.75
CCM2-206ENST00000474617 FAM50AQ14320 339 aaKnown RBP32.21■■■□□ 2.75
CCM2-206ENST00000474617 JPH4Q96JJ6 628 aa32.21■■■□□ 2.75
CCM2-206ENST00000474617 CDK11AQ9UQ88 783 aaPredicted RBP32.19■■■□□ 2.74
CCM2-206ENST00000474617 MIA2Q96PC5 1412 aa32.18■■■□□ 2.74
CCM2-206ENST00000474617 MAGI3Q5TCQ9 1506 aa32.18■■■□□ 2.74
CCM2-206ENST00000474617 NUP153P49790 1475 aaKnown RBP32.17■■■□□ 2.74
CCM2-206ENST00000474617 TCOF1Q13428 1488 aaKnown RBP32.15■■■□□ 2.74
CCM2-206ENST00000474617 RAB3GAP2Q9H2M9 1393 aa32.13■■■□□ 2.73
CCM2-206ENST00000474617 CDK13Q14004 1512 aaKnown RBP32.13■■■□□ 2.73
CCM2-206ENST00000474617 PTPN23Q9H3S7 1636 aa32.1■■■□□ 2.73
CCM2-206ENST00000474617 ITGAEP38570 1179 aa32.09■■■□□ 2.73
CCM2-206ENST00000474617 CHD1O14646 1710 aa32.04■■■□□ 2.72
CCM2-206ENST00000474617 ABCA8O94911 1581 aa32.02■■■□□ 2.72
CCM2-206ENST00000474617 HFM1A2PYH4 1435 aa32.02■■■□□ 2.72
CCM2-206ENST00000474617 ACIN1Q9UKV3 1341 aaKnown RBP32■■■□□ 2.71
CCM2-206ENST00000474617 TROQ12816 1431 aaPredicted RBP32■■■□□ 2.71
CCM2-206ENST00000474617 SHROOM2Q13796 1616 aa32■■■□□ 2.71
CCM2-206ENST00000474617 AKNAQ7Z591 1439 aa31.99■■■□□ 2.71
CCM2-206ENST00000474617 ADCY10Q96PN6 1610 aa31.97■■■□□ 2.71
CCM2-206ENST00000474617 PLB1Q6P1J6 1458 aa31.96■■■□□ 2.71
CCM2-206ENST00000474617 PRG4Q92954 1404 aaPredicted RBP31.94■■■□□ 2.7
CCM2-206ENST00000474617 ITSN2Q9NZM3 1697 aa31.9■■■□□ 2.7
CCM2-206ENST00000474617 PTPRGP23470 1445 aa31.87■■■□□ 2.69
CCM2-206ENST00000474617 MAPKBP1O60336 1514 aa31.85■■■□□ 2.69
CCM2-206ENST00000474617 ZNF316A6NFI3 1004 aaPredicted RBP31.84■■■□□ 2.69
CCM2-206ENST00000474617 PTPRKQ15262 1439 aa31.84■■■□□ 2.69
CCM2-206ENST00000474617 TIMELESSQ9UNS1 1208 aa31.83■■■□□ 2.69
CCM2-206ENST00000474617 NAIPQ13075 1403 aa31.82■■■□□ 2.68
CCM2-206ENST00000474617 GCC2Q8IWJ2 1684 aa31.81■■■□□ 2.68
CCM2-206ENST00000474617 UACAQ9BZF9 1416 aa31.8■■■□□ 2.68
CCM2-206ENST00000474617 ROCK1Q13464 1354 aa31.79■■■□□ 2.68
CCM2-206ENST00000474617 CLASP1Q7Z460 1538 aa31.78■■■□□ 2.68
CCM2-206ENST00000474617 ATP10BO94823 1461 aa31.77■■■□□ 2.68
CCM2-206ENST00000474617 DNMT1P26358 1616 aaKnown RBP31.76■■■□□ 2.68
CCM2-206ENST00000474617 KIF14Q15058 1648 aa31.76■■■□□ 2.68
CCM2-206ENST00000474617 PLEKHD1A6NEE1 506 aa31.76■■■□□ 2.68
CCM2-206ENST00000474617 ARID3CA6NKF2 412 aa31.71■■■□□ 2.67
CCM2-206ENST00000474617 GPATCH8Q9UKJ3 1502 aaKnown RBP31.71■■■□□ 2.67
CCM2-206ENST00000474617 DAPK1P53355 1430 aa31.7■■■□□ 2.66
CCM2-206ENST00000474617 ABCC10Q5T3U5 1492 aa31.64■■■□□ 2.66
CCM2-206ENST00000474617 DIEXFQ68CQ4 756 aaKnown RBP31.64■■■□□ 2.66
CCM2-206ENST00000474617 CFDP1Q9UEE9 299 aaPredicted RBP31.64■■■□□ 2.66
CCM2-206ENST00000474617 CAMSAP2Q08AD1 1489 aa31.63■■■□□ 2.65
CCM2-206ENST00000474617 ABCC2Q92887 1545 aa31.63■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms