RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 FMN1Q68DA7 1419 aa13.89□□□□□ -0.19
NPAS2-208ENST00000474550 MRS2Q9HD23 443 aa13.89□□□□□ -0.19
NPAS2-208ENST00000474550 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
NPAS2-208ENST00000474550 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
NPAS2-208ENST00000474550 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
NPAS2-208ENST00000474550 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
NPAS2-208ENST00000474550 CARMIL1Q5VZK9 1371 aa13.85□□□□□ -0.19
NPAS2-208ENST00000474550 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
NPAS2-208ENST00000474550 CUX2O14529 1486 aa13.83□□□□□ -0.2
NPAS2-208ENST00000474550 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.2
NPAS2-208ENST00000474550 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
NPAS2-208ENST00000474550 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
NPAS2-208ENST00000474550 NEFMP07197 916 aa13.79□□□□□ -0.2
NPAS2-208ENST00000474550 RAB3GAP2Q9H2M9 1393 aa13.79□□□□□ -0.2
NPAS2-208ENST00000474550 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
NPAS2-208ENST00000474550 GLIPR1L2Q4G1C9 344 aa13.79□□□□□ -0.2
NPAS2-208ENST00000474550 EIF5BO60841 1220 aaKnown RBP13.79□□□□□ -0.2
NPAS2-208ENST00000474550 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
NPAS2-208ENST00000474550 DHX57Q6P158 1386 aaKnown RBP13.78□□□□□ -0.2
NPAS2-208ENST00000474550 PPM1GO15355 546 aaPredicted RBP13.78□□□□□ -0.2
NPAS2-208ENST00000474550 TSPY4P0CV99 314 aa13.76□□□□□ -0.21
NPAS2-208ENST00000474550 TSPY10P0CW01 314 aa13.76□□□□□ -0.21
NPAS2-208ENST00000474550 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
NPAS2-208ENST00000474550 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
NPAS2-208ENST00000474550 CUX1P39880 1505 aa13.75□□□□□ -0.21
NPAS2-208ENST00000474550 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
NPAS2-208ENST00000474550 ARID4BQ4LE39 1312 aaPredicted RBP13.74□□□□□ -0.21
NPAS2-208ENST00000474550 WDR43Q15061 677 aaKnown RBP eCLIP13.72□□□□□ -0.21
NPAS2-208ENST00000474550 BECN1Q14457 450 aa13.71□□□□□ -0.21
NPAS2-208ENST00000474550 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
NPAS2-208ENST00000474550 ROCK2O75116 1388 aaKnown RBP13.7□□□□□ -0.22
NPAS2-208ENST00000474550 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
NPAS2-208ENST00000474550 ZNF777Q9ULD5 760 aaPredicted RBP13.69□□□□□ -0.22
NPAS2-208ENST00000474550 NPM2Q86SE8 214 aaKnown RBP13.69□□□□□ -0.22
NPAS2-208ENST00000474550 RRBP1Q9P2E9 1410 aaKnown RBP13.68□□□□□ -0.22
NPAS2-208ENST00000474550 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
NPAS2-208ENST00000474550 PPP1R15AO75807 674 aaPredicted RBP13.65□□□□□ -0.22
NPAS2-208ENST00000474550 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.22
NPAS2-208ENST00000474550 EFCAB5A4FU69 1503 aa13.64□□□□□ -0.23
NPAS2-208ENST00000474550 RRP7BPQ9NSQ0 103 aa13.64□□□□□ -0.23
NPAS2-208ENST00000474550 CCDC18Q5T9S5 1454 aa13.63□□□□□ -0.23
NPAS2-208ENST00000474550 KANK4Q5T7N3 995 aaPredicted RBP13.62□□□□□ -0.23
NPAS2-208ENST00000474550 MAP3K1Q13233 1512 aa13.61□□□□□ -0.23
NPAS2-208ENST00000474550 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
NPAS2-208ENST00000474550 TSHZ2Q9NRE2 1034 aa13.61□□□□□ -0.23
NPAS2-208ENST00000474550 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
NPAS2-208ENST00000474550 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
NPAS2-208ENST00000474550 PHLDB1Q86UU1 1377 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 HMGXB3Q12766 1538 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 NBR1Q14596 966 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 FBLN2P98095 1184 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
NPAS2-208ENST00000474550 FYCO1Q9BQS8 1478 aa13.59□□□□□ -0.23
NPAS2-208ENST00000474550 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
NPAS2-208ENST00000474550 PDS5BQ9NTI5 1447 aa13.59□□□□□ -0.23
NPAS2-208ENST00000474550 RALBP1Q15311 655 aa13.59□□□□□ -0.23
NPAS2-208ENST00000474550 FANCIQ9NVI1 1328 aa13.57□□□□□ -0.24
NPAS2-208ENST00000474550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
NPAS2-208ENST00000474550 LRRC9Q6ZRR7 1453 aa13.57□□□□□ -0.24
NPAS2-208ENST00000474550 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
NPAS2-208ENST00000474550 MS4A1P11836 297 aa13.56□□□□□ -0.24
NPAS2-208ENST00000474550 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
NPAS2-208ENST00000474550 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
NPAS2-208ENST00000474550 TCERG1O14776 1098 aaKnown RBP13.55□□□□□ -0.24
NPAS2-208ENST00000474550 PDE3BQ13370 1112 aa13.55□□□□□ -0.24
NPAS2-208ENST00000474550 CHMP4BQ9H444 224 aaKnown RBP13.55□□□□□ -0.24
NPAS2-208ENST00000474550 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
NPAS2-208ENST00000474550 UACAQ9BZF9 1416 aa13.54□□□□□ -0.24
NPAS2-208ENST00000474550 CHMP7Q8WUX9 453 aaPredicted RBP13.54□□□□□ -0.24
NPAS2-208ENST00000474550 PRXQ9BXM0 1461 aa13.54□□□□□ -0.24
NPAS2-208ENST00000474550 KNSTRNQ9Y448 316 aa13.54□□□□□ -0.24
NPAS2-208ENST00000474550 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
NPAS2-208ENST00000474550 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
NPAS2-208ENST00000474550 HIRIP3Q9BW71 556 aaPredicted RBP13.53□□□□□ -0.24
NPAS2-208ENST00000474550 TIAM1Q13009 1591 aa13.53□□□□□ -0.24
NPAS2-208ENST00000474550 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
NPAS2-208ENST00000474550 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.24
NPAS2-208ENST00000474550 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.24
NPAS2-208ENST00000474550 KTN1Q86UP2 1357 aaKnown RBP13.52□□□□□ -0.24
NPAS2-208ENST00000474550 BIVM-ERCC5R4GMW8 1640 aa13.51□□□□□ -0.25
NPAS2-208ENST00000474550 CARMIL2Q6F5E8 1435 aa13.51□□□□□ -0.25
NPAS2-208ENST00000474550 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
NPAS2-208ENST00000474550 BCL11AQ9H165 835 aa13.5□□□□□ -0.25
NPAS2-208ENST00000474550 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
NPAS2-208ENST00000474550 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
NPAS2-208ENST00000474550 CFAP53Q96M91 514 aa13.49□□□□□ -0.25
NPAS2-208ENST00000474550 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
NPAS2-208ENST00000474550 NUDCQ9Y266 331 aa13.49□□□□□ -0.25
NPAS2-208ENST00000474550 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
NPAS2-208ENST00000474550 FGD6Q6ZV73 1430 aa13.48□□□□□ -0.25
NPAS2-208ENST00000474550 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
NPAS2-208ENST00000474550 TMF1P82094 1093 aa13.48□□□□□ -0.25
NPAS2-208ENST00000474550 PTMSP20962 102 aa13.47□□□□□ -0.25
NPAS2-208ENST00000474550 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
NPAS2-208ENST00000474550 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
NPAS2-208ENST00000474550 KIF15Q9NS87 1388 aa13.47□□□□□ -0.25
NPAS2-208ENST00000474550 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
NPAS2-208ENST00000474550 SUPT6HQ7KZ85 1726 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms