RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 NISCHQ9Y2I1 1504 aa18.63■□□□□ 0.57
NPAS2-208ENST00000474550 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
NPAS2-208ENST00000474550 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
NPAS2-208ENST00000474550 SHROOM4Q9ULL8 1493 aa16.55■□□□□ 0.24
NPAS2-208ENST00000474550 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
NPAS2-208ENST00000474550 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
NPAS2-208ENST00000474550 MYT1Q01538 1121 aa16.1■□□□□ 0.17
NPAS2-208ENST00000474550 PCGF6Q9BYE7 350 aa16.06■□□□□ 0.16
NPAS2-208ENST00000474550 HRCP23327 699 aa15.96■□□□□ 0.15
NPAS2-208ENST00000474550 CENPBP07199 599 aaPredicted RBP15.94■□□□□ 0.14
NPAS2-208ENST00000474550 CCDC180Q9P1Z9 1646 aa15.89■□□□□ 0.13
NPAS2-208ENST00000474550 TRIM26Q12899 539 aaPredicted RBP15.88■□□□□ 0.13
NPAS2-208ENST00000474550 APLP2Q06481 763 aa15.86■□□□□ 0.13
NPAS2-208ENST00000474550 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
NPAS2-208ENST00000474550 CHIC1Q5VXU3 224 aa15.74■□□□□ 0.11
NPAS2-208ENST00000474550 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
NPAS2-208ENST00000474550 CCER1Q8TC90 406 aaPredicted RBP15.63■□□□□ 0.09
NPAS2-208ENST00000474550 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
NPAS2-208ENST00000474550 FAM9AQ8IZU1 332 aaPredicted RBP15.54■□□□□ 0.08
NPAS2-208ENST00000474550 EHMT2Q96KQ7 1210 aa15.42■□□□□ 0.06
NPAS2-208ENST00000474550 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
NPAS2-208ENST00000474550 LOC105371045A0A1W2PR82 267 aa15.23■□□□□ 0.03
NPAS2-208ENST00000474550 NEFLP07196 543 aa15.23■□□□□ 0.03
NPAS2-208ENST00000474550 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
NPAS2-208ENST00000474550 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
NPAS2-208ENST00000474550 DIEXFQ68CQ4 756 aaKnown RBP15.11■□□□□ 0.01
NPAS2-208ENST00000474550 TTBK1Q5TCY1 1321 aaPredicted RBP15.07■□□□□ 0
NPAS2-208ENST00000474550 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
NPAS2-208ENST00000474550 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
NPAS2-208ENST00000474550 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
NPAS2-208ENST00000474550 EEA1Q15075 1411 aa14.91□□□□□ -0.02
NPAS2-208ENST00000474550 NACADO15069 1562 aa14.91□□□□□ -0.02
NPAS2-208ENST00000474550 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
NPAS2-208ENST00000474550 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
NPAS2-208ENST00000474550 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
NPAS2-208ENST00000474550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
NPAS2-208ENST00000474550 ABCC9O60706 1549 aa14.87□□□□□ -0.03
NPAS2-208ENST00000474550 MYO15BQ96JP2 1530 aa14.87□□□□□ -0.03
NPAS2-208ENST00000474550 RANGAP1P46060 587 aaPredicted RBP14.81□□□□□ -0.04
NPAS2-208ENST00000474550 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
NPAS2-208ENST00000474550 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.04
NPAS2-208ENST00000474550 CSRNP3Q8WYN3 585 aa14.76□□□□□ -0.05
NPAS2-208ENST00000474550 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
NPAS2-208ENST00000474550 ATP1B4Q9UN42 357 aaPredicted RBP14.74□□□□□ -0.05
NPAS2-208ENST00000474550 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
NPAS2-208ENST00000474550 GOLGA3Q08378 1498 aa14.64□□□□□ -0.07
NPAS2-208ENST00000474550 ANP32CO43423 234 aa14.58□□□□□ -0.08
NPAS2-208ENST00000474550 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.08
NPAS2-208ENST00000474550 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
NPAS2-208ENST00000474550 CEP164Q9UPV0 1460 aa14.54□□□□□ -0.08
NPAS2-208ENST00000474550 CEP162Q5TB80 1403 aa14.53□□□□□ -0.08
NPAS2-208ENST00000474550 DAXXQ9UER7 740 aaPredicted RBP14.52□□□□□ -0.08
NPAS2-208ENST00000474550 ITGAEP38570 1179 aa14.52□□□□□ -0.09
NPAS2-208ENST00000474550 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
NPAS2-208ENST00000474550 CLIP1P30622 1438 aa14.49□□□□□ -0.09
NPAS2-208ENST00000474550 RTL5Q5HYW3 569 aaPredicted RBP14.47□□□□□ -0.09
NPAS2-208ENST00000474550 SCAF1Q9H7N4 1312 aaKnown RBP14.46□□□□□ -0.09
NPAS2-208ENST00000474550 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
NPAS2-208ENST00000474550 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
NPAS2-208ENST00000474550 WRNQ14191 1432 aaPredicted RBP eCLIP14.4□□□□□ -0.1
NPAS2-208ENST00000474550 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
NPAS2-208ENST00000474550 TONSLQ96HA7 1378 aa14.32□□□□□ -0.12
NPAS2-208ENST00000474550 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.121e-8■■■□□ 17.2
NPAS2-208ENST00000474550 BAZ1BQ9UIG0 1483 aaKnown RBP14.29□□□□□ -0.12
NPAS2-208ENST00000474550 TIMELESSQ9UNS1 1208 aa14.26□□□□□ -0.13
NPAS2-208ENST00000474550 KIF27Q86VH2 1401 aa14.26□□□□□ -0.13
NPAS2-208ENST00000474550 TRIM52Q96A61 297 aa14.25□□□□□ -0.13
NPAS2-208ENST00000474550 MROH2BQ7Z745 1585 aa14.25□□□□□ -0.13
NPAS2-208ENST00000474550 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
NPAS2-208ENST00000474550 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
NPAS2-208ENST00000474550 ANP32AP39687 249 aaKnown RBP14.23□□□□□ -0.13
NPAS2-208ENST00000474550 WIZO95785 1651 aa14.21□□□□□ -0.13
NPAS2-208ENST00000474550 MIER1Q8N108 512 aa14.2□□□□□ -0.14
NPAS2-208ENST00000474550 FHAD1B1AJZ9 1412 aa14.2□□□□□ -0.14
NPAS2-208ENST00000474550 CECR2Q9BXF3 1484 aa14.19□□□□□ -0.14
NPAS2-208ENST00000474550 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
NPAS2-208ENST00000474550 SMARCA4P51532 1647 aa14.16□□□□□ -0.14
NPAS2-208ENST00000474550 FKBP8Q14318 412 aa14.15□□□□□ -0.14
NPAS2-208ENST00000474550 POLR3GLQ9BT43 218 aa14.15□□□□□ -0.14
NPAS2-208ENST00000474550 BCANQ96GW7 911 aa14.13□□□□□ -0.15
NPAS2-208ENST00000474550 CCNB3Q8WWL7 1395 aa14.1□□□□□ -0.15
NPAS2-208ENST00000474550 MTUS2Q5JR59 1369 aa14.08□□□□□ -0.16
NPAS2-208ENST00000474550 ABCC8Q09428 1581 aa14.07□□□□□ -0.16
NPAS2-208ENST00000474550 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
NPAS2-208ENST00000474550 CCER2I3L3R5 266 aa14.06□□□□□ -0.16
NPAS2-208ENST00000474550 DDX10Q13206 875 aaKnown RBP14.05□□□□□ -0.16
NPAS2-208ENST00000474550 ANP32EQ9BTT0 268 aa14.05□□□□□ -0.16
NPAS2-208ENST00000474550 HNRNPUQ00839 825 aaKnown RBP eCLIP14.04□□□□□ -0.16
NPAS2-208ENST00000474550 SOGA1O94964 1423 aa14.04□□□□□ -0.16
NPAS2-208ENST00000474550 KIF21BO75037 1637 aa14.04□□□□□ -0.16
NPAS2-208ENST00000474550 EIF4G2P78344 907 aaKnown RBP eCLIP14□□□□□ -0.17
NPAS2-208ENST00000474550 SETD5Q9C0A6 1442 aa13.99□□□□□ -0.17
NPAS2-208ENST00000474550 ARHGAP35Q9NRY4 1499 aa13.96□□□□□ -0.18
NPAS2-208ENST00000474550 SUPT16HQ9Y5B9 1047 aaKnown RBP13.94□□□□□ -0.18
NPAS2-208ENST00000474550 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.94□□□□□ -0.18
NPAS2-208ENST00000474550 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
NPAS2-208ENST00000474550 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
NPAS2-208ENST00000474550 ERICH3Q5RHP9 1530 aa13.91□□□□□ -0.18
NPAS2-208ENST00000474550 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
NPAS2-208ENST00000474550 CCDC136Q96JN2 1154 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms