RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
DDX56-209ENST00000473924 PRXQ9BXM0 1461 aa20.58■□□□□ 0.89
DDX56-209ENST00000473924 KIAA0586Q9BVV6 1533 aa20.56■□□□□ 0.88
DDX56-209ENST00000473924 JPH4Q96JJ6 628 aa20.53■□□□□ 0.88
DDX56-209ENST00000473924 SHROOM2Q13796 1616 aa20.51■□□□□ 0.87
DDX56-209ENST00000473924 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
DDX56-209ENST00000473924 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
DDX56-209ENST00000473924 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
DDX56-209ENST00000473924 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
DDX56-209ENST00000473924 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
DDX56-209ENST00000473924 KIF21BO75037 1637 aa20.44■□□□□ 0.86
DDX56-209ENST00000473924 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
DDX56-209ENST00000473924 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
DDX56-209ENST00000473924 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
DDX56-209ENST00000473924 GOLGA3Q08378 1498 aa20.36■□□□□ 0.85
DDX56-209ENST00000473924 UGGT2Q9NYU1 1516 aa20.34■□□□□ 0.85
DDX56-209ENST00000473924 UBTFP17480 764 aaKnown RBP20.34■□□□□ 0.85
DDX56-209ENST00000473924 TTBK1Q5TCY1 1321 aaPredicted RBP20.29■□□□□ 0.84
DDX56-209ENST00000473924 DISP1Q96F81 1524 aa20.29■□□□□ 0.84
DDX56-209ENST00000473924 RANGAP1P46060 587 aaPredicted RBP20.28■□□□□ 0.84
DDX56-209ENST00000473924 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.84
DDX56-209ENST00000473924 KIAA0556O60303 1618 aa20.27■□□□□ 0.83
DDX56-209ENST00000473924 PTPRGP23470 1445 aa20.26■□□□□ 0.83
DDX56-209ENST00000473924 P3H3Q8IVL6 736 aa20.2■□□□□ 0.82
DDX56-209ENST00000473924 SAMD9Q5K651 1589 aa20.17■□□□□ 0.82
DDX56-209ENST00000473924 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDX56-209ENST00000473924 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
DDX56-209ENST00000473924 ADCY10Q96PN6 1610 aa20.12■□□□□ 0.81
DDX56-209ENST00000473924 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
DDX56-209ENST00000473924 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
DDX56-209ENST00000473924 ABCC2Q92887 1545 aa20.07■□□□□ 0.8
DDX56-209ENST00000473924 UHRF1BP1LA0JNW5 1464 aa20.06■□□□□ 0.8
DDX56-209ENST00000473924 PLB1Q6P1J6 1458 aa20.06■□□□□ 0.8
DDX56-209ENST00000473924 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
DDX56-209ENST00000473924 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
DDX56-209ENST00000473924 TRHP20396 242 aaPredicted RBP20.03■□□□□ 0.8
DDX56-209ENST00000473924 ABCA8O94911 1581 aa20.02■□□□□ 0.8
DDX56-209ENST00000473924 CLIP1P30622 1438 aa20.01■□□□□ 0.79
DDX56-209ENST00000473924 RAPGEF6Q8TEU7 1601 aa19.98■□□□□ 0.79
DDX56-209ENST00000473924 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
DDX56-209ENST00000473924 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
DDX56-209ENST00000473924 MAPKBP1O60336 1514 aa19.96■□□□□ 0.79
DDX56-209ENST00000473924 ZCCHC11Q5TAX3 1644 aaKnown RBP19.94■□□□□ 0.78
DDX56-209ENST00000473924 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
DDX56-209ENST00000473924 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
DDX56-209ENST00000473924 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
DDX56-209ENST00000473924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.9■□□□□ 0.78
DDX56-209ENST00000473924 HNRNPUL2Q1KMD3 747 aaKnown RBP19.9■□□□□ 0.78
DDX56-209ENST00000473924 ASXL2Q76L83 1435 aa19.9■□□□□ 0.78
DDX56-209ENST00000473924 NUP153P49790 1475 aaKnown RBP19.88■□□□□ 0.77
DDX56-209ENST00000473924 ATP10BO94823 1461 aa19.87■□□□□ 0.77
DDX56-209ENST00000473924 ABCC10Q5T3U5 1492 aa19.86■□□□□ 0.77
DDX56-209ENST00000473924 HECW1Q76N89 1606 aa19.85■□□□□ 0.77
DDX56-209ENST00000473924 FAM69CQ0P6D2 419 aa19.85■□□□□ 0.77
DDX56-209ENST00000473924 DIP2BQ9P265 1576 aa19.83■□□□□ 0.76
DDX56-209ENST00000473924 WDR7Q9Y4E6 1490 aa19.82■□□□□ 0.76
DDX56-209ENST00000473924 KIF13AQ9H1H9 1805 aa19.82■□□□□ 0.76
DDX56-209ENST00000473924 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
DDX56-209ENST00000473924 CASKIN1Q8WXD9 1431 aa19.8■□□□□ 0.76
DDX56-209ENST00000473924 KCNH8Q96L42 1107 aa19.79■□□□□ 0.76
DDX56-209ENST00000473924 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
DDX56-209ENST00000473924 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
DDX56-209ENST00000473924 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.76
DDX56-209ENST00000473924 FYCO1Q9BQS8 1478 aa19.77■□□□□ 0.76
DDX56-209ENST00000473924 GLI2P10070 1586 aa19.74■□□□□ 0.75
DDX56-209ENST00000473924 CDK11AQ9UQ88 783 aaPredicted RBP19.73■□□□□ 0.75
DDX56-209ENST00000473924 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
DDX56-209ENST00000473924 LRRIQ1Q96JM4 1722 aa19.71■□□□□ 0.75
DDX56-209ENST00000473924 TSPOAP1O95153 1857 aa19.69■□□□□ 0.74
DDX56-209ENST00000473924 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
DDX56-209ENST00000473924 MAP3K4Q9Y6R4 1608 aa19.66■□□□□ 0.74
DDX56-209ENST00000473924 CFAP43Q8NDM7 1665 aa19.65■□□□□ 0.74
DDX56-209ENST00000473924 CD109Q6YHK3 1445 aa19.64■□□□□ 0.73
DDX56-209ENST00000473924 TROQ12816 1431 aaPredicted RBP19.62■□□□□ 0.73
DDX56-209ENST00000473924 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
DDX56-209ENST00000473924 TEX14Q8IWB6 1497 aa19.6■□□□□ 0.73
DDX56-209ENST00000473924 KIF14Q15058 1648 aa19.58■□□□□ 0.73
DDX56-209ENST00000473924 PPRC1Q5VV67 1664 aaKnown RBP19.58■□□□□ 0.72
DDX56-209ENST00000473924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDX56-209ENST00000473924 MTUS2Q5JR59 1369 aa19.57■□□□□ 0.72
DDX56-209ENST00000473924 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
DDX56-209ENST00000473924 APLP2Q06481 763 aa19.55■□□□□ 0.72
DDX56-209ENST00000473924 TTC37Q6PGP7 1564 aa19.55■□□□□ 0.72
DDX56-209ENST00000473924 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
DDX56-209ENST00000473924 KDM6BO15054 1643 aa19.5■□□□□ 0.71
DDX56-209ENST00000473924 EHBP1L1Q8N3D4 1523 aa19.5■□□□□ 0.71
DDX56-209ENST00000473924 MAP3K1Q13233 1512 aa19.48■□□□□ 0.71
DDX56-209ENST00000473924 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
DDX56-209ENST00000473924 PLCH2O75038 1416 aa19.47■□□□□ 0.71
DDX56-209ENST00000473924 FANCAO15360 1455 aa19.46■□□□□ 0.71
DDX56-209ENST00000473924 NEO1Q92859 1461 aa19.45■□□□□ 0.7
DDX56-209ENST00000473924 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
DDX56-209ENST00000473924 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
DDX56-209ENST00000473924 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
DDX56-209ENST00000473924 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
DDX56-209ENST00000473924 EFCAB2Q5VUJ9 269 aa19.43■□□□□ 0.7
DDX56-209ENST00000473924 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
DDX56-209ENST00000473924 CCNB3Q8WWL7 1395 aa19.42■□□□□ 0.7
DDX56-209ENST00000473924 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
DDX56-209ENST00000473924 ARAP3Q8WWN8 1544 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms