RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
BRAT1-205ENST00000473879 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
BRAT1-205ENST00000473879 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
BRAT1-205ENST00000473879 EEA1Q15075 1411 aa22.13■■□□□ 1.13
BRAT1-205ENST00000473879 KIAA0586Q9BVV6 1533 aa22.11■■□□□ 1.13
BRAT1-205ENST00000473879 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
BRAT1-205ENST00000473879 RAPGEF2Q9Y4G8 1499 aa22.08■■□□□ 1.12
BRAT1-205ENST00000473879 IQGAP2Q13576 1575 aa21.97■■□□□ 1.11
BRAT1-205ENST00000473879 KIF21BO75037 1637 aa21.95■■□□□ 1.1
BRAT1-205ENST00000473879 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
BRAT1-205ENST00000473879 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
BRAT1-205ENST00000473879 TRHP20396 242 aaPredicted RBP21.92■■□□□ 1.1
BRAT1-205ENST00000473879 UGGT2Q9NYU1 1516 aa21.9■■□□□ 1.1
BRAT1-205ENST00000473879 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
BRAT1-205ENST00000473879 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
BRAT1-205ENST00000473879 TNIKQ9UKE5 1360 aa21.83■■□□□ 1.08
BRAT1-205ENST00000473879 PTPRGP23470 1445 aa21.82■■□□□ 1.08
BRAT1-205ENST00000473879 ADCY10Q96PN6 1610 aa21.82■■□□□ 1.08
BRAT1-205ENST00000473879 KIAA0556O60303 1618 aa21.79■■□□□ 1.08
BRAT1-205ENST00000473879 NPM1P06748 294 aaKnown RBP eCLIP21.76■■□□□ 1.07
BRAT1-205ENST00000473879 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
BRAT1-205ENST00000473879 GOLGA3Q08378 1498 aa21.72■■□□□ 1.07
BRAT1-205ENST00000473879 MAPKBP1O60336 1514 aa21.72■■□□□ 1.07
BRAT1-205ENST00000473879 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
BRAT1-205ENST00000473879 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
BRAT1-205ENST00000473879 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
BRAT1-205ENST00000473879 UHRF1BP1LA0JNW5 1464 aa21.67■■□□□ 1.06
BRAT1-205ENST00000473879 UACAQ9BZF9 1416 aa21.67■■□□□ 1.06
BRAT1-205ENST00000473879 ABCC2Q92887 1545 aa21.65■■□□□ 1.06
BRAT1-205ENST00000473879 DIP2BQ9P265 1576 aa21.61■■□□□ 1.05
BRAT1-205ENST00000473879 ABCC10Q5T3U5 1492 aa21.61■■□□□ 1.05
BRAT1-205ENST00000473879 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
BRAT1-205ENST00000473879 FAM69CQ0P6D2 419 aa21.57■■□□□ 1.04
BRAT1-205ENST00000473879 KDM5BQ9UGL1 1544 aa21.56■■□□□ 1.04
BRAT1-205ENST00000473879 ABCA8O94911 1581 aa21.55■■□□□ 1.04
BRAT1-205ENST00000473879 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
BRAT1-205ENST00000473879 PLB1Q6P1J6 1458 aa21.53■■□□□ 1.04
BRAT1-205ENST00000473879 ASXL2Q76L83 1435 aa21.52■■□□□ 1.04
BRAT1-205ENST00000473879 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
BRAT1-205ENST00000473879 ARHGAP35Q9NRY4 1499 aa21.49■■□□□ 1.03
BRAT1-205ENST00000473879 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
BRAT1-205ENST00000473879 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
BRAT1-205ENST00000473879 GLI2P10070 1586 aa21.44■■□□□ 1.02
BRAT1-205ENST00000473879 FHOD3Q2V2M9 1422 aa21.43■■□□□ 1.02
BRAT1-205ENST00000473879 TSPOAP1O95153 1857 aa21.42■■□□□ 1.02
BRAT1-205ENST00000473879 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
BRAT1-205ENST00000473879 RAPGEF6Q8TEU7 1601 aa21.4■■□□□ 1.02
BRAT1-205ENST00000473879 EPRSP07814 1512 aaKnown RBP21.39■■□□□ 1.02
BRAT1-205ENST00000473879 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.01
BRAT1-205ENST00000473879 WDR7Q9Y4E6 1490 aa21.39■■□□□ 1.01
BRAT1-205ENST00000473879 PPRC1Q5VV67 1664 aaKnown RBP21.37■■□□□ 1.01
BRAT1-205ENST00000473879 MAP3K4Q9Y6R4 1608 aa21.37■■□□□ 1.01
BRAT1-205ENST00000473879 ATP10BO94823 1461 aa21.35■■□□□ 1.01
BRAT1-205ENST00000473879 NUP153P49790 1475 aaKnown RBP21.35■■□□□ 1.01
BRAT1-205ENST00000473879 FMN1Q68DA7 1419 aa21.3■■□□□ 1
BRAT1-205ENST00000473879 KDM6BO15054 1643 aa21.3■■□□□ 1
BRAT1-205ENST00000473879 CLIP1P30622 1438 aa21.29■■□□□ 1
BRAT1-205ENST00000473879 CFAP43Q8NDM7 1665 aa21.29■■□□□ 1
BRAT1-205ENST00000473879 ARID3CA6NKF2 412 aa21.29■■□□□ 1
BRAT1-205ENST00000473879 KCNH8Q96L42 1107 aa21.27■■□□□ 1
BRAT1-205ENST00000473879 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
BRAT1-205ENST00000473879 HECW1Q76N89 1606 aa21.23■□□□□ 0.99
BRAT1-205ENST00000473879 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
BRAT1-205ENST00000473879 LRRIQ1Q96JM4 1722 aa21.23■□□□□ 0.99
BRAT1-205ENST00000473879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.22■□□□□ 0.99
BRAT1-205ENST00000473879 HNRNPUL2Q1KMD3 747 aaKnown RBP21.22■□□□□ 0.99
BRAT1-205ENST00000473879 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
BRAT1-205ENST00000473879 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
BRAT1-205ENST00000473879 CASKIN1Q8WXD9 1431 aa21.21■□□□□ 0.99
BRAT1-205ENST00000473879 MAGI3Q5TCQ9 1506 aa21.19■□□□□ 0.98
BRAT1-205ENST00000473879 ABCA9Q8IUA7 1624 aa21.18■□□□□ 0.98
BRAT1-205ENST00000473879 FYCO1Q9BQS8 1478 aa21.18■□□□□ 0.98
BRAT1-205ENST00000473879 PLEKHD1A6NEE1 506 aa21.16■□□□□ 0.98
BRAT1-205ENST00000473879 CDK13Q14004 1512 aaKnown RBP21.14■□□□□ 0.98
BRAT1-205ENST00000473879 COL17A1Q9UMD9 1497 aaPredicted RBP21.12■□□□□ 0.97
BRAT1-205ENST00000473879 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
BRAT1-205ENST00000473879 CCDC18Q5T9S5 1454 aa21.09■□□□□ 0.97
BRAT1-205ENST00000473879 CDK11AQ9UQ88 783 aaPredicted RBP21.05■□□□□ 0.96
BRAT1-205ENST00000473879 PHLDB1Q86UU1 1377 aa21.05■□□□□ 0.96
BRAT1-205ENST00000473879 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
BRAT1-205ENST00000473879 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
BRAT1-205ENST00000473879 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.96
BRAT1-205ENST00000473879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.02■□□□□ 0.96
BRAT1-205ENST00000473879 ARAP3Q8WWN8 1544 aa21.01■□□□□ 0.95
BRAT1-205ENST00000473879 NEO1Q92859 1461 aa21.01■□□□□ 0.95
BRAT1-205ENST00000473879 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
BRAT1-205ENST00000473879 CFAP74Q9C0B2 1584 aa20.97■□□□□ 0.95
BRAT1-205ENST00000473879 KIF14Q15058 1648 aa20.96■□□□□ 0.95
BRAT1-205ENST00000473879 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
BRAT1-205ENST00000473879 MYO5CQ9NQX4 1742 aa20.93■□□□□ 0.94
BRAT1-205ENST00000473879 TIAM1Q13009 1591 aa20.92■□□□□ 0.94
BRAT1-205ENST00000473879 FANCAO15360 1455 aa20.91■□□□□ 0.94
BRAT1-205ENST00000473879 PLCH2O75038 1416 aa20.91■□□□□ 0.94
BRAT1-205ENST00000473879 FRMPD1Q5SYB0 1578 aa20.91■□□□□ 0.94
BRAT1-205ENST00000473879 AKNAQ7Z591 1439 aa20.9■□□□□ 0.94
BRAT1-205ENST00000473879 KDM4FA0A1W2PPD8 638 aa20.89■□□□□ 0.93
BRAT1-205ENST00000473879 RICTORQ6R327 1708 aa20.87■□□□□ 0.93
BRAT1-205ENST00000473879 RAPGEF3O95398 923 aa20.87■□□□□ 0.93
BRAT1-205ENST00000473879 EHBP1L1Q8N3D4 1523 aa20.87■□□□□ 0.93
BRAT1-205ENST00000473879 DENND4BO75064 1496 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms