RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
HSPG2-208ENST00000471322 CSRNP3Q8WYN3 585 aa28.22■■■□□ 2.11
HSPG2-208ENST00000471322 CYB5RLQ6IPT4 315 aa28.19■■■□□ 2.1
HSPG2-208ENST00000471322 JPH4Q96JJ6 628 aa28.17■■■□□ 2.1
HSPG2-208ENST00000471322 PRXQ9BXM0 1461 aa28.15■■■□□ 2.1
HSPG2-208ENST00000471322 ERCC6L2Q5T890 1561 aa28.15■■■□□ 2.1
HSPG2-208ENST00000471322 KIAA0586Q9BVV6 1533 aa28.14■■■□□ 2.09
HSPG2-208ENST00000471322 ARAP1Q96P48 1450 aa28.13■■■□□ 2.09
HSPG2-208ENST00000471322 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
HSPG2-208ENST00000471322 PRG4Q92954 1404 aaPredicted RBP28.1■■■□□ 2.09
HSPG2-208ENST00000471322 EHMT2Q96KQ7 1210 aa28.08■■■□□ 2.09
HSPG2-208ENST00000471322 IQGAP2Q13576 1575 aa28.01■■■□□ 2.07
HSPG2-208ENST00000471322 TTBK1Q5TCY1 1321 aaPredicted RBP27.94■■■□□ 2.06
HSPG2-208ENST00000471322 CTTNBP2Q8WZ74 1663 aa27.92■■■□□ 2.06
HSPG2-208ENST00000471322 RANGAP1P46060 587 aaPredicted RBP27.87■■■□□ 2.05
HSPG2-208ENST00000471322 KIF21BO75037 1637 aa27.87■■■□□ 2.05
HSPG2-208ENST00000471322 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
HSPG2-208ENST00000471322 DISP1Q96F81 1524 aa27.83■■■□□ 2.05
HSPG2-208ENST00000471322 UGGT2Q9NYU1 1516 aa27.83■■■□□ 2.05
HSPG2-208ENST00000471322 UBTFP17480 764 aaKnown RBP27.81■■■□□ 2.04
HSPG2-208ENST00000471322 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
HSPG2-208ENST00000471322 TNIKQ9UKE5 1360 aa27.78■■■□□ 2.04
HSPG2-208ENST00000471322 PTPRGP23470 1445 aa27.77■■■□□ 2.04
HSPG2-208ENST00000471322 P3H3Q8IVL6 736 aa27.75■■■□□ 2.03
HSPG2-208ENST00000471322 KIAA0556O60303 1618 aa27.74■■■□□ 2.03
HSPG2-208ENST00000471322 ADCY10Q96PN6 1610 aa27.62■■■□□ 2.01
HSPG2-208ENST00000471322 TRHP20396 242 aaPredicted RBP27.59■■■□□ 2.01
HSPG2-208ENST00000471322 CEP162Q5TB80 1403 aa27.57■■■□□ 2
HSPG2-208ENST00000471322 SAMD9Q5K651 1589 aa27.57■■■□□ 2
HSPG2-208ENST00000471322 NPM1P06748 294 aaKnown RBP eCLIP27.56■■■□□ 2
HSPG2-208ENST00000471322 UACAQ9BZF9 1416 aa27.55■■■□□ 2
HSPG2-208ENST00000471322 PLB1Q6P1J6 1458 aa27.54■■■□□ 2
HSPG2-208ENST00000471322 FHOD3Q2V2M9 1422 aa27.54■■■□□ 2
HSPG2-208ENST00000471322 ABCC2Q92887 1545 aa27.47■■□□□ 1.99
HSPG2-208ENST00000471322 ARID3CA6NKF2 412 aa27.46■■□□□ 1.99
HSPG2-208ENST00000471322 UHRF1BP1LA0JNW5 1464 aa27.45■■□□□ 1.98
HSPG2-208ENST00000471322 EFCAB5A4FU69 1503 aa27.45■■□□□ 1.98
HSPG2-208ENST00000471322 ARHGAP35Q9NRY4 1499 aa27.43■■□□□ 1.98
HSPG2-208ENST00000471322 ABCA8O94911 1581 aa27.41■■□□□ 1.98
HSPG2-208ENST00000471322 CLIP1P30622 1438 aa27.36■■□□□ 1.97
HSPG2-208ENST00000471322 KDM5BQ9UGL1 1544 aa27.35■■□□□ 1.97
HSPG2-208ENST00000471322 MAPKBP1O60336 1514 aa27.35■■□□□ 1.97
HSPG2-208ENST00000471322 ZCCHC11Q5TAX3 1644 aaKnown RBP27.33■■□□□ 1.97
HSPG2-208ENST00000471322 ASXL2Q76L83 1435 aa27.32■■□□□ 1.96
HSPG2-208ENST00000471322 RAPGEF6Q8TEU7 1601 aa27.31■■□□□ 1.96
HSPG2-208ENST00000471322 FAM69CQ0P6D2 419 aa27.3■■□□□ 1.96
HSPG2-208ENST00000471322 ATP1B4Q9UN42 357 aaPredicted RBP27.29■■□□□ 1.96
HSPG2-208ENST00000471322 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
HSPG2-208ENST00000471322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.27■■□□□ 1.96
HSPG2-208ENST00000471322 HNRNPUL2Q1KMD3 747 aaKnown RBP27.27■■□□□ 1.96
HSPG2-208ENST00000471322 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
HSPG2-208ENST00000471322 ABCC10Q5T3U5 1492 aa27.25■■□□□ 1.95
HSPG2-208ENST00000471322 ATP10BO94823 1461 aa27.24■■□□□ 1.95
HSPG2-208ENST00000471322 FMN1Q68DA7 1419 aa27.23■■□□□ 1.95
HSPG2-208ENST00000471322 KIF13AQ9H1H9 1805 aa27.23■■□□□ 1.95
HSPG2-208ENST00000471322 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
HSPG2-208ENST00000471322 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
HSPG2-208ENST00000471322 KCNH8Q96L42 1107 aa27.19■■□□□ 1.94
HSPG2-208ENST00000471322 WDR7Q9Y4E6 1490 aa27.16■■□□□ 1.94
HSPG2-208ENST00000471322 VPS8Q8N3P4 1428 aa27.13■■□□□ 1.93
HSPG2-208ENST00000471322 EPRSP07814 1512 aaKnown RBP27.13■■□□□ 1.93
HSPG2-208ENST00000471322 CDK13Q14004 1512 aaKnown RBP27.13■■□□□ 1.93
HSPG2-208ENST00000471322 PCF11O94913 1555 aaKnown RBP27.08■■□□□ 1.93
HSPG2-208ENST00000471322 HECW1Q76N89 1606 aa27.08■■□□□ 1.93
HSPG2-208ENST00000471322 TSPOAP1O95153 1857 aa27.07■■□□□ 1.92
HSPG2-208ENST00000471322 CASKIN1Q8WXD9 1431 aa27.04■■□□□ 1.92
HSPG2-208ENST00000471322 PLEKHD1A6NEE1 506 aa27.04■■□□□ 1.92
HSPG2-208ENST00000471322 GLI2P10070 1586 aa27.02■■□□□ 1.92
HSPG2-208ENST00000471322 LRRIQ1Q96JM4 1722 aa27■■□□□ 1.91
HSPG2-208ENST00000471322 APLP2Q06481 763 aa26.98■■□□□ 1.91
HSPG2-208ENST00000471322 FYCO1Q9BQS8 1478 aa26.98■■□□□ 1.91
HSPG2-208ENST00000471322 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
HSPG2-208ENST00000471322 MAP3K4Q9Y6R4 1608 aa26.95■■□□□ 1.9
HSPG2-208ENST00000471322 CD109Q6YHK3 1445 aa26.94■■□□□ 1.9
HSPG2-208ENST00000471322 CDK11AQ9UQ88 783 aaPredicted RBP26.91■■□□□ 1.9
HSPG2-208ENST00000471322 PPRC1Q5VV67 1664 aaKnown RBP26.91■■□□□ 1.9
HSPG2-208ENST00000471322 CCDC18Q5T9S5 1454 aa26.89■■□□□ 1.9
HSPG2-208ENST00000471322 CFAP43Q8NDM7 1665 aa26.86■■□□□ 1.89
HSPG2-208ENST00000471322 ABCA9Q8IUA7 1624 aa26.85■■□□□ 1.89
HSPG2-208ENST00000471322 TROQ12816 1431 aaPredicted RBP26.83■■□□□ 1.89
HSPG2-208ENST00000471322 MAGI3Q5TCQ9 1506 aa26.83■■□□□ 1.89
HSPG2-208ENST00000471322 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.82■■□□□ 1.88
HSPG2-208ENST00000471322 KIF14Q15058 1648 aa26.8■■□□□ 1.88
HSPG2-208ENST00000471322 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
HSPG2-208ENST00000471322 TEX14Q8IWB6 1497 aa26.8■■□□□ 1.88
HSPG2-208ENST00000471322 KDM6BO15054 1643 aa26.76■■□□□ 1.87
HSPG2-208ENST00000471322 COL17A1Q9UMD9 1497 aaPredicted RBP26.74■■□□□ 1.87
HSPG2-208ENST00000471322 MTUS2Q5JR59 1369 aa26.73■■□□□ 1.87
HSPG2-208ENST00000471322 MAP3K1Q13233 1512 aa26.68■■□□□ 1.86
HSPG2-208ENST00000471322 FANCAO15360 1455 aa26.65■■□□□ 1.86
HSPG2-208ENST00000471322 TIAM1Q13009 1591 aa26.65■■□□□ 1.86
HSPG2-208ENST00000471322 PLCH2O75038 1416 aa26.65■■□□□ 1.86
HSPG2-208ENST00000471322 KANK4Q5T7N3 995 aaPredicted RBP26.62■■□□□ 1.85
HSPG2-208ENST00000471322 MYO5CQ9NQX4 1742 aa26.61■■□□□ 1.85
HSPG2-208ENST00000471322 NEO1Q92859 1461 aa26.61■■□□□ 1.85
HSPG2-208ENST00000471322 RAPGEF3O95398 923 aa26.61■■□□□ 1.85
HSPG2-208ENST00000471322 EHBP1L1Q8N3D4 1523 aa26.59■■□□□ 1.85
HSPG2-208ENST00000471322 AKNAQ7Z591 1439 aa26.59■■□□□ 1.85
HSPG2-208ENST00000471322 ARHGAP5Q13017 1502 aa26.59■■□□□ 1.85
HSPG2-208ENST00000471322 HRCP23327 699 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms