RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
CLK2-204ENST00000471047 RUSC2Q8N2Y8 1516 aa16.24■□□□□ 0.19
CLK2-204ENST00000471047 PRG4Q92954 1404 aaPredicted RBP16.24■□□□□ 0.19
CLK2-204ENST00000471047 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
CLK2-204ENST00000471047 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
CLK2-204ENST00000471047 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
CLK2-204ENST00000471047 JPH4Q96JJ6 628 aa16.18■□□□□ 0.18
CLK2-204ENST00000471047 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
CLK2-204ENST00000471047 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
CLK2-204ENST00000471047 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
CLK2-204ENST00000471047 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
CLK2-204ENST00000471047 MAPKBP1O60336 1514 aa16.13■□□□□ 0.17
CLK2-204ENST00000471047 KDM6BO15054 1643 aa16.12■□□□□ 0.17
CLK2-204ENST00000471047 ERICH3Q5RHP9 1530 aa16.1■□□□□ 0.17
CLK2-204ENST00000471047 ADCY10Q96PN6 1610 aa16.08■□□□□ 0.17
CLK2-204ENST00000471047 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.16
CLK2-204ENST00000471047 KIF21BO75037 1637 aa16.08■□□□□ 0.16
CLK2-204ENST00000471047 IGF1RP08069 1367 aa16.06■□□□□ 0.16
CLK2-204ENST00000471047 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
CLK2-204ENST00000471047 TSPOAP1O95153 1857 aa16.01■□□□□ 0.15
CLK2-204ENST00000471047 GOLGA3Q08378 1498 aa16■□□□□ 0.15
CLK2-204ENST00000471047 CUL7Q14999 1698 aa15.99■□□□□ 0.15
CLK2-204ENST00000471047 ADGRL1O94910 1474 aa15.98■□□□□ 0.15
CLK2-204ENST00000471047 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
CLK2-204ENST00000471047 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
CLK2-204ENST00000471047 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
CLK2-204ENST00000471047 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
CLK2-204ENST00000471047 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
CLK2-204ENST00000471047 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
CLK2-204ENST00000471047 PTPRGP23470 1445 aa15.91■□□□□ 0.14
CLK2-204ENST00000471047 HECW2Q9P2P5 1572 aa15.91■□□□□ 0.14
CLK2-204ENST00000471047 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
CLK2-204ENST00000471047 ASXL2Q76L83 1435 aa15.89■□□□□ 0.13
CLK2-204ENST00000471047 PPRC1Q5VV67 1664 aaKnown RBP15.88■□□□□ 0.13
CLK2-204ENST00000471047 ABCC2Q92887 1545 aa15.87■□□□□ 0.13
CLK2-204ENST00000471047 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
CLK2-204ENST00000471047 PLB1Q6P1J6 1458 aa15.84■□□□□ 0.13
CLK2-204ENST00000471047 GLI2P10070 1586 aa15.84■□□□□ 0.13
CLK2-204ENST00000471047 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
CLK2-204ENST00000471047 EPRSP07814 1512 aaKnown RBP15.78■□□□□ 0.12
CLK2-204ENST00000471047 CARMIL2Q6F5E8 1435 aa15.77■□□□□ 0.12
CLK2-204ENST00000471047 CTTNBP2Q8WZ74 1663 aa15.77■□□□□ 0.12
CLK2-204ENST00000471047 UHRF1BP1LA0JNW5 1464 aa15.77■□□□□ 0.11
CLK2-204ENST00000471047 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
CLK2-204ENST00000471047 FBXO41Q8TF61 875 aa15.73■□□□□ 0.11
CLK2-204ENST00000471047 MAP3K4Q9Y6R4 1608 aa15.72■□□□□ 0.11
CLK2-204ENST00000471047 TEX14Q8IWB6 1497 aa15.72■□□□□ 0.11
CLK2-204ENST00000471047 CLIP1P30622 1438 aa15.72■□□□□ 0.11
CLK2-204ENST00000471047 KDM5BQ9UGL1 1544 aa15.71■□□□□ 0.11
CLK2-204ENST00000471047 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
CLK2-204ENST00000471047 IQGAP2Q13576 1575 aa15.68■□□□□ 0.1
CLK2-204ENST00000471047 ARHGAP35Q9NRY4 1499 aa15.65■□□□□ 0.1
CLK2-204ENST00000471047 ZCCHC11Q5TAX3 1644 aaKnown RBP15.65■□□□□ 0.1
CLK2-204ENST00000471047 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
CLK2-204ENST00000471047 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
CLK2-204ENST00000471047 SAMD9Q5K651 1589 aa15.62■□□□□ 0.09
CLK2-204ENST00000471047 UGGT2Q9NYU1 1516 aa15.6■□□□□ 0.09
CLK2-204ENST00000471047 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
CLK2-204ENST00000471047 RANGAP1P46060 587 aaPredicted RBP15.59■□□□□ 0.09
CLK2-204ENST00000471047 KCNH8Q96L42 1107 aa15.59■□□□□ 0.09
CLK2-204ENST00000471047 VPS8Q8N3P4 1428 aa15.59■□□□□ 0.09
CLK2-204ENST00000471047 MAGI3Q5TCQ9 1506 aa15.58■□□□□ 0.09
CLK2-204ENST00000471047 KIAA0556O60303 1618 aa15.56■□□□□ 0.08
CLK2-204ENST00000471047 PTPRMP28827 1452 aa15.53■□□□□ 0.08
CLK2-204ENST00000471047 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
CLK2-204ENST00000471047 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
CLK2-204ENST00000471047 P3H3Q8IVL6 736 aa15.47■□□□□ 0.07
CLK2-204ENST00000471047 ADAMTSL3P82987 1691 aa15.47■□□□□ 0.07
CLK2-204ENST00000471047 ARAP3Q8WWN8 1544 aa15.47■□□□□ 0.07
CLK2-204ENST00000471047 LMTK3Q96Q04 1460 aa15.46■□□□□ 0.07
CLK2-204ENST00000471047 FMN1Q68DA7 1419 aa15.46■□□□□ 0.07
CLK2-204ENST00000471047 ARID3CA6NKF2 412 aa15.46■□□□□ 0.07
CLK2-204ENST00000471047 ABCA8O94911 1581 aa15.45■□□□□ 0.06
CLK2-204ENST00000471047 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
CLK2-204ENST00000471047 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
CLK2-204ENST00000471047 FYCO1Q9BQS8 1478 aa15.42■□□□□ 0.06
CLK2-204ENST00000471047 HSPA2P54652 639 aa15.42■□□□□ 0.06
CLK2-204ENST00000471047 CASKIN1Q8WXD9 1431 aa15.42■□□□□ 0.06
CLK2-204ENST00000471047 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
CLK2-204ENST00000471047 MADDQ8WXG6 1647 aa15.39■□□□□ 0.05
CLK2-204ENST00000471047 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
CLK2-204ENST00000471047 ILDR2Q71H61 639 aa15.38■□□□□ 0.05
CLK2-204ENST00000471047 ATP10BO94823 1461 aa15.36■□□□□ 0.05
CLK2-204ENST00000471047 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
CLK2-204ENST00000471047 BCORL1Q5H9F3 1711 aa15.36■□□□□ 0.05
CLK2-204ENST00000471047 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
CLK2-204ENST00000471047 CERKQ8TCT0 537 aa15.35■□□□□ 0.05
CLK2-204ENST00000471047 TIAM1Q13009 1591 aa15.35■□□□□ 0.05
CLK2-204ENST00000471047 LRRIQ1Q96JM4 1722 aa15.34■□□□□ 0.05
CLK2-204ENST00000471047 FRMPD1Q5SYB0 1578 aa15.34■□□□□ 0.05
CLK2-204ENST00000471047 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
CLK2-204ENST00000471047 ABCA9Q8IUA7 1624 aa15.32■□□□□ 0.04
CLK2-204ENST00000471047 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
CLK2-204ENST00000471047 APLP2Q06481 763 aa15.32■□□□□ 0.04
CLK2-204ENST00000471047 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
CLK2-204ENST00000471047 NEO1Q92859 1461 aa15.32■□□□□ 0.04
CLK2-204ENST00000471047 SOCS7O14512 581 aa15.3■□□□□ 0.04
CLK2-204ENST00000471047 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
CLK2-204ENST00000471047 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
CLK2-204ENST00000471047 PPARGC1BQ86YN6 1023 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms