RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 CARMIL1Q5VZK9 1371 aa14.4□□□□□ -0.1
RRP1B-202ENST00000470886 CADPSQ9ULU8 1353 aa14.38□□□□□ -0.11
RRP1B-202ENST00000470886 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
RRP1B-202ENST00000470886 ZNF326Q5BKZ1 582 aaKnown RBP14.35□□□□□ -0.11
RRP1B-202ENST00000470886 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
RRP1B-202ENST00000470886 BIVM-ERCC5R4GMW8 1640 aa14.34□□□□□ -0.11
RRP1B-202ENST00000470886 CFTRP13569 1480 aa14.34□□□□□ -0.11
RRP1B-202ENST00000470886 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
RRP1B-202ENST00000470886 MTUS2Q5JR59 1369 aa14.33□□□□□ -0.12
RRP1B-202ENST00000470886 GLIPR1L2Q4G1C9 344 aa14.3□□□□□ -0.12
RRP1B-202ENST00000470886 FMN1Q68DA7 1419 aa14.29□□□□□ -0.12
RRP1B-202ENST00000470886 SETD5Q9C0A6 1442 aa14.29□□□□□ -0.12
RRP1B-202ENST00000470886 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
RRP1B-202ENST00000470886 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
RRP1B-202ENST00000470886 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
RRP1B-202ENST00000470886 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
RRP1B-202ENST00000470886 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
RRP1B-202ENST00000470886 PDS5BQ9NTI5 1447 aa14.21□□□□□ -0.13
RRP1B-202ENST00000470886 CUX1P39880 1505 aa14.21□□□□□ -0.13
RRP1B-202ENST00000470886 MAP3K1Q13233 1512 aa14.21□□□□□ -0.14
RRP1B-202ENST00000470886 FAM9BQ8IZU0 186 aa14.21□□□□□ -0.14
RRP1B-202ENST00000470886 ARAP1Q96P48 1450 aa14.2□□□□□ -0.14
RRP1B-202ENST00000470886 MRS2Q9HD23 443 aa14.2□□□□□ -0.14
RRP1B-202ENST00000470886 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
RRP1B-202ENST00000470886 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
RRP1B-202ENST00000470886 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
RRP1B-202ENST00000470886 EFCAB5A4FU69 1503 aa14.19□□□□□ -0.14
RRP1B-202ENST00000470886 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
RRP1B-202ENST00000470886 CCDC136Q96JN2 1154 aa14.18□□□□□ -0.14
RRP1B-202ENST00000470886 IGF1RP08069 1367 aa14.18□□□□□ -0.14
RRP1B-202ENST00000470886 CCER2I3L3R5 266 aa14.17□□□□□ -0.14
RRP1B-202ENST00000470886 TMC1Q8TDI8 760 aa14.17□□□□□ -0.14
RRP1B-202ENST00000470886 RAB3GAP2Q9H2M9 1393 aa14.16□□□□□ -0.14
RRP1B-202ENST00000470886 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
RRP1B-202ENST00000470886 ZNF777Q9ULD5 760 aaPredicted RBP14.16□□□□□ -0.14
RRP1B-202ENST00000470886 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
RRP1B-202ENST00000470886 ZBTB47Q9UFB7 747 aaPredicted RBP14.14□□□□□ -0.15
RRP1B-202ENST00000470886 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.13□□□□□ -0.15
RRP1B-202ENST00000470886 FBLN2P98095 1184 aa14.13□□□□□ -0.15
RRP1B-202ENST00000470886 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
RRP1B-202ENST00000470886 FYCO1Q9BQS8 1478 aa14.12□□□□□ -0.15
RRP1B-202ENST00000470886 LRRC9Q6ZRR7 1453 aa14.11□□□□□ -0.15
RRP1B-202ENST00000470886 ARID3CA6NKF2 412 aa14.1□□□□□ -0.15
RRP1B-202ENST00000470886 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
RRP1B-202ENST00000470886 TSPY4P0CV99 314 aa14.09□□□□□ -0.15
RRP1B-202ENST00000470886 TSPY10P0CW01 314 aa14.09□□□□□ -0.15
RRP1B-202ENST00000470886 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
RRP1B-202ENST00000470886 ERICH6BQ5W0A0 696 aa14.08□□□□□ -0.15
RRP1B-202ENST00000470886 DNMBPQ6XZF7 1577 aa14.08□□□□□ -0.15
RRP1B-202ENST00000470886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
RRP1B-202ENST00000470886 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
RRP1B-202ENST00000470886 BCL11AQ9H165 835 aa14.07□□□□□ -0.16
RRP1B-202ENST00000470886 NEFMP07197 916 aa14.07□□□□□ -0.16
RRP1B-202ENST00000470886 PPP4R2Q9NY27 417 aa14.07□□□□□ -0.16
RRP1B-202ENST00000470886 CUL7Q14999 1698 aa14.07□□□□□ -0.16
RRP1B-202ENST00000470886 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.163e-7■■■□□ 17.7
RRP1B-202ENST00000470886 UPF2Q9HAU5 1272 aaKnown RBP14.05□□□□□ -0.16
RRP1B-202ENST00000470886 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
RRP1B-202ENST00000470886 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
RRP1B-202ENST00000470886 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
RRP1B-202ENST00000470886 CCDC18Q5T9S5 1454 aa14.05□□□□□ -0.16
RRP1B-202ENST00000470886 RRP7BPQ9NSQ0 103 aa14.04□□□□□ -0.16
RRP1B-202ENST00000470886 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
RRP1B-202ENST00000470886 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
RRP1B-202ENST00000470886 DDRGK1Q96HY6 314 aa14.02□□□□□ -0.16
RRP1B-202ENST00000470886 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.17
RRP1B-202ENST00000470886 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
RRP1B-202ENST00000470886 WDR43Q15061 677 aaKnown RBP eCLIP14□□□□□ -0.17
RRP1B-202ENST00000470886 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
RRP1B-202ENST00000470886 TOPBP1Q92547 1522 aa13.97□□□□□ -0.17
RRP1B-202ENST00000470886 FGD6Q6ZV73 1430 aa13.97□□□□□ -0.17
RRP1B-202ENST00000470886 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
RRP1B-202ENST00000470886 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
RRP1B-202ENST00000470886 PPP1R15AO75807 674 aaPredicted RBP13.96□□□□□ -0.17
RRP1B-202ENST00000470886 EHBP1L1Q8N3D4 1523 aa13.95□□□□□ -0.18
RRP1B-202ENST00000470886 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
RRP1B-202ENST00000470886 CDCA8Q53HL2 280 aa13.93□□□□□ -0.18
RRP1B-202ENST00000470886 PHLDB1Q86UU1 1377 aa13.93□□□□□ -0.18
RRP1B-202ENST00000470886 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
RRP1B-202ENST00000470886 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
RRP1B-202ENST00000470886 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
RRP1B-202ENST00000470886 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
RRP1B-202ENST00000470886 NBR1Q14596 966 aa13.92□□□□□ -0.18
RRP1B-202ENST00000470886 RAD54L2Q9Y4B4 1467 aa13.91□□□□□ -0.18
RRP1B-202ENST00000470886 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
RRP1B-202ENST00000470886 CHMP7Q8WUX9 453 aaPredicted RBP13.91□□□□□ -0.18
RRP1B-202ENST00000470886 ANP32BQ92688 251 aaKnown RBP13.91□□□□□ -0.18
RRP1B-202ENST00000470886 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
RRP1B-202ENST00000470886 THOC2Q8NI27 1593 aaKnown RBP13.91□□□□□ -0.18
RRP1B-202ENST00000470886 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
RRP1B-202ENST00000470886 CARMIL2Q6F5E8 1435 aa13.89□□□□□ -0.19
RRP1B-202ENST00000470886 PCF11O94913 1555 aaKnown RBP13.89□□□□□ -0.19
RRP1B-202ENST00000470886 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
RRP1B-202ENST00000470886 CFAP43Q8NDM7 1665 aa13.87□□□□□ -0.19
RRP1B-202ENST00000470886 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
RRP1B-202ENST00000470886 SUPT6HQ7KZ85 1726 aaKnown RBP13.87□□□□□ -0.19
RRP1B-202ENST00000470886 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
RRP1B-202ENST00000470886 RBM19Q9Y4C8 960 aaKnown RBP13.87□□□□□ -0.19
RRP1B-202ENST00000470886 BECN1Q14457 450 aa13.86□□□□□ -0.19
RRP1B-202ENST00000470886 NOP58Q9Y2X3 529 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms