RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
TOP3B-215ENST00000470338 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
TOP3B-215ENST00000470338 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
TOP3B-215ENST00000470338 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
TOP3B-215ENST00000470338 IQGAP2Q13576 1575 aa23.83■■□□□ 1.41
TOP3B-215ENST00000470338 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
TOP3B-215ENST00000470338 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
TOP3B-215ENST00000470338 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
TOP3B-215ENST00000470338 EEA1Q15075 1411 aa23.77■■□□□ 1.4
TOP3B-215ENST00000470338 CTTNBP2Q8WZ74 1663 aa23.75■■□□□ 1.39
TOP3B-215ENST00000470338 CARMIL2Q6F5E8 1435 aa23.72■■□□□ 1.39
TOP3B-215ENST00000470338 UGGT2Q9NYU1 1516 aa23.71■■□□□ 1.39
TOP3B-215ENST00000470338 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
TOP3B-215ENST00000470338 TRHP20396 242 aaPredicted RBP23.68■■□□□ 1.38
TOP3B-215ENST00000470338 PTPRGP23470 1445 aa23.66■■□□□ 1.38
TOP3B-215ENST00000470338 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
TOP3B-215ENST00000470338 ADCY10Q96PN6 1610 aa23.63■■□□□ 1.37
TOP3B-215ENST00000470338 FAM9AQ8IZU1 332 aaPredicted RBP23.61■■□□□ 1.37
TOP3B-215ENST00000470338 KIAA0556O60303 1618 aa23.61■■□□□ 1.37
TOP3B-215ENST00000470338 KIF21BO75037 1637 aa23.55■■□□□ 1.36
TOP3B-215ENST00000470338 NPM1P06748 294 aaKnown RBP eCLIP23.55■■□□□ 1.36
TOP3B-215ENST00000470338 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
TOP3B-215ENST00000470338 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
TOP3B-215ENST00000470338 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
TOP3B-215ENST00000470338 MAPKBP1O60336 1514 aa23.5■■□□□ 1.35
TOP3B-215ENST00000470338 UACAQ9BZF9 1416 aa23.5■■□□□ 1.35
TOP3B-215ENST00000470338 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
TOP3B-215ENST00000470338 ABCC2Q92887 1545 aa23.47■■□□□ 1.35
TOP3B-215ENST00000470338 SAMD9Q5K651 1589 aa23.43■■□□□ 1.34
TOP3B-215ENST00000470338 ABCC10Q5T3U5 1492 aa23.41■■□□□ 1.34
TOP3B-215ENST00000470338 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.34
TOP3B-215ENST00000470338 PLB1Q6P1J6 1458 aa23.37■■□□□ 1.33
TOP3B-215ENST00000470338 ABCA8O94911 1581 aa23.37■■□□□ 1.33
TOP3B-215ENST00000470338 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
TOP3B-215ENST00000470338 P3H3Q8IVL6 736 aa23.36■■□□□ 1.33
TOP3B-215ENST00000470338 ZCCHC11Q5TAX3 1644 aaKnown RBP23.34■■□□□ 1.33
TOP3B-215ENST00000470338 FAM69CQ0P6D2 419 aa23.34■■□□□ 1.33
TOP3B-215ENST00000470338 ASXL2Q76L83 1435 aa23.33■■□□□ 1.32
TOP3B-215ENST00000470338 UBTFP17480 764 aaKnown RBP23.31■■□□□ 1.32
TOP3B-215ENST00000470338 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
TOP3B-215ENST00000470338 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
TOP3B-215ENST00000470338 EFCAB5A4FU69 1503 aa23.28■■□□□ 1.32
TOP3B-215ENST00000470338 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
TOP3B-215ENST00000470338 GLI2P10070 1586 aa23.23■■□□□ 1.31
TOP3B-215ENST00000470338 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
TOP3B-215ENST00000470338 TSPOAP1O95153 1857 aa23.21■■□□□ 1.31
TOP3B-215ENST00000470338 EPRSP07814 1512 aaKnown RBP23.19■■□□□ 1.3
TOP3B-215ENST00000470338 WDR7Q9Y4E6 1490 aa23.18■■□□□ 1.3
TOP3B-215ENST00000470338 ATP10BO94823 1461 aa23.17■■□□□ 1.3
TOP3B-215ENST00000470338 ARHGAP35Q9NRY4 1499 aa23.14■■□□□ 1.29
TOP3B-215ENST00000470338 MAP3K4Q9Y6R4 1608 aa23.13■■□□□ 1.29
TOP3B-215ENST00000470338 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
TOP3B-215ENST00000470338 NUP153P49790 1475 aaKnown RBP23.12■■□□□ 1.29
TOP3B-215ENST00000470338 ARID3CA6NKF2 412 aa23.1■■□□□ 1.29
TOP3B-215ENST00000470338 KCNH8Q96L42 1107 aa23.06■■□□□ 1.28
TOP3B-215ENST00000470338 FMN1Q68DA7 1419 aa23.06■■□□□ 1.28
TOP3B-215ENST00000470338 CFAP43Q8NDM7 1665 aa23.05■■□□□ 1.28
TOP3B-215ENST00000470338 KDM6BO15054 1643 aa23.01■■□□□ 1.27
TOP3B-215ENST00000470338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
TOP3B-215ENST00000470338 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
TOP3B-215ENST00000470338 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
TOP3B-215ENST00000470338 TEX14Q8IWB6 1497 aa22.98■■□□□ 1.27
TOP3B-215ENST00000470338 MAGI3Q5TCQ9 1506 aa22.97■■□□□ 1.27
TOP3B-215ENST00000470338 HECW1Q76N89 1606 aa22.97■■□□□ 1.27
TOP3B-215ENST00000470338 ABCA9Q8IUA7 1624 aa22.97■■□□□ 1.27
TOP3B-215ENST00000470338 PLEKHD1A6NEE1 506 aa22.95■■□□□ 1.26
TOP3B-215ENST00000470338 CLIP1P30622 1438 aa22.94■■□□□ 1.26
TOP3B-215ENST00000470338 CDK13Q14004 1512 aaKnown RBP22.93■■□□□ 1.26
TOP3B-215ENST00000470338 ATP1B4Q9UN42 357 aaPredicted RBP22.9■■□□□ 1.26
TOP3B-215ENST00000470338 LRRIQ1Q96JM4 1722 aa22.9■■□□□ 1.26
TOP3B-215ENST00000470338 COL17A1Q9UMD9 1497 aaPredicted RBP22.89■■□□□ 1.25
TOP3B-215ENST00000470338 CASKIN1Q8WXD9 1431 aa22.87■■□□□ 1.25
TOP3B-215ENST00000470338 PCF11O94913 1555 aaKnown RBP22.85■■□□□ 1.25
TOP3B-215ENST00000470338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.82■■□□□ 1.245e-7■□□□□ 8.9
TOP3B-215ENST00000470338 LOC105371045A0A1W2PR82 267 aa22.82■■□□□ 1.24
TOP3B-215ENST00000470338 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
TOP3B-215ENST00000470338 CEP162Q5TB80 1403 aa22.81■■□□□ 1.24
TOP3B-215ENST00000470338 FYCO1Q9BQS8 1478 aa22.8■■□□□ 1.24
TOP3B-215ENST00000470338 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
TOP3B-215ENST00000470338 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
TOP3B-215ENST00000470338 ARAP3Q8WWN8 1544 aa22.78■■□□□ 1.24
TOP3B-215ENST00000470338 TTC37Q6PGP7 1564 aa22.78■■□□□ 1.24
TOP3B-215ENST00000470338 NEO1Q92859 1461 aa22.77■■□□□ 1.24
TOP3B-215ENST00000470338 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
TOP3B-215ENST00000470338 KIF14Q15058 1648 aa22.71■■□□□ 1.23
TOP3B-215ENST00000470338 CFAP74Q9C0B2 1584 aa22.69■■□□□ 1.22
TOP3B-215ENST00000470338 PLCH2O75038 1416 aa22.69■■□□□ 1.22
TOP3B-215ENST00000470338 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
TOP3B-215ENST00000470338 FANCAO15360 1455 aa22.68■■□□□ 1.22
TOP3B-215ENST00000470338 AKNAQ7Z591 1439 aa22.66■■□□□ 1.22
TOP3B-215ENST00000470338 RAPGEF3O95398 923 aa22.63■■□□□ 1.21
TOP3B-215ENST00000470338 FRMPD1Q5SYB0 1578 aa22.61■■□□□ 1.21
TOP3B-215ENST00000470338 RICTORQ6R327 1708 aa22.61■■□□□ 1.21
TOP3B-215ENST00000470338 CDC42BPBQ9Y5S2 1711 aa22.6■■□□□ 1.21
TOP3B-215ENST00000470338 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
TOP3B-215ENST00000470338 EFCAB2Q5VUJ9 269 aa22.59■■□□□ 1.21
TOP3B-215ENST00000470338 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
TOP3B-215ENST00000470338 KDM4FA0A1W2PPD8 638 aa22.56■■□□□ 1.2
TOP3B-215ENST00000470338 CDC42BPAQ5VT25 1732 aa22.56■■□□□ 1.2
TOP3B-215ENST00000470338 VPS8Q8N3P4 1428 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms