RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
CDC42SE1-203ENST00000470278 KIF13AQ9H1H9 1805 aa25.09■■□□□ 1.61
CDC42SE1-203ENST00000470278 EEA1Q15075 1411 aa25.09■■□□□ 1.61
CDC42SE1-203ENST00000470278 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
CDC42SE1-203ENST00000470278 CARMIL1Q5VZK9 1371 aa24.99■■□□□ 1.59
CDC42SE1-203ENST00000470278 PRXQ9BXM0 1461 aa24.95■■□□□ 1.58
CDC42SE1-203ENST00000470278 RAPGEF2Q9Y4G8 1499 aa24.93■■□□□ 1.58
CDC42SE1-203ENST00000470278 ADCY10Q96PN6 1610 aa24.91■■□□□ 1.58
CDC42SE1-203ENST00000470278 JPH4Q96JJ6 628 aa24.89■■□□□ 1.58
CDC42SE1-203ENST00000470278 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
CDC42SE1-203ENST00000470278 KIF21BO75037 1637 aa24.83■■□□□ 1.57
CDC42SE1-203ENST00000470278 KIAA0586Q9BVV6 1533 aa24.83■■□□□ 1.57
CDC42SE1-203ENST00000470278 MAPKBP1O60336 1514 aa24.82■■□□□ 1.56
CDC42SE1-203ENST00000470278 DIP2BQ9P265 1576 aa24.81■■□□□ 1.56
CDC42SE1-203ENST00000470278 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
CDC42SE1-203ENST00000470278 CTTNBP2Q8WZ74 1663 aa24.75■■□□□ 1.55
CDC42SE1-203ENST00000470278 FAM9AQ8IZU1 332 aaPredicted RBP24.75■■□□□ 1.55
CDC42SE1-203ENST00000470278 IQGAP2Q13576 1575 aa24.72■■□□□ 1.55
CDC42SE1-203ENST00000470278 GOLGA3Q08378 1498 aa24.65■■□□□ 1.54
CDC42SE1-203ENST00000470278 TSPOAP1O95153 1857 aa24.62■■□□□ 1.53
CDC42SE1-203ENST00000470278 UGGT2Q9NYU1 1516 aa24.61■■□□□ 1.53
CDC42SE1-203ENST00000470278 FAM69CQ0P6D2 419 aa24.59■■□□□ 1.53
CDC42SE1-203ENST00000470278 PPRC1Q5VV67 1664 aaKnown RBP24.59■■□□□ 1.53
CDC42SE1-203ENST00000470278 DISP1Q96F81 1524 aa24.57■■□□□ 1.52
CDC42SE1-203ENST00000470278 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
CDC42SE1-203ENST00000470278 KDM6BO15054 1643 aa24.53■■□□□ 1.52
CDC42SE1-203ENST00000470278 PTPRGP23470 1445 aa24.53■■□□□ 1.52
CDC42SE1-203ENST00000470278 ABCC2Q92887 1545 aa24.53■■□□□ 1.52
CDC42SE1-203ENST00000470278 TNIKQ9UKE5 1360 aa24.5■■□□□ 1.51
CDC42SE1-203ENST00000470278 CARMIL2Q6F5E8 1435 aa24.49■■□□□ 1.51
CDC42SE1-203ENST00000470278 UHRF1BP1LA0JNW5 1464 aa24.49■■□□□ 1.51
CDC42SE1-203ENST00000470278 KIAA0556O60303 1618 aa24.49■■□□□ 1.51
CDC42SE1-203ENST00000470278 NPM1P06748 294 aaKnown RBP eCLIP24.47■■□□□ 1.51
CDC42SE1-203ENST00000470278 GLI2P10070 1586 aa24.46■■□□□ 1.51
CDC42SE1-203ENST00000470278 SAMD9Q5K651 1589 aa24.46■■□□□ 1.51
CDC42SE1-203ENST00000470278 ASXL2Q76L83 1435 aa24.44■■□□□ 1.5
CDC42SE1-203ENST00000470278 ZCCHC11Q5TAX3 1644 aaKnown RBP24.41■■□□□ 1.5
CDC42SE1-203ENST00000470278 EFCAB5A4FU69 1503 aa24.4■■□□□ 1.5
CDC42SE1-203ENST00000470278 KDM5BQ9UGL1 1544 aa24.4■■□□□ 1.5
CDC42SE1-203ENST00000470278 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
CDC42SE1-203ENST00000470278 UACAQ9BZF9 1416 aa24.4■■□□□ 1.5
CDC42SE1-203ENST00000470278 MAP3K4Q9Y6R4 1608 aa24.39■■□□□ 1.49
CDC42SE1-203ENST00000470278 TTBK1Q5TCY1 1321 aaPredicted RBP24.37■■□□□ 1.49
CDC42SE1-203ENST00000470278 PLB1Q6P1J6 1458 aa24.37■■□□□ 1.49
CDC42SE1-203ENST00000470278 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
CDC42SE1-203ENST00000470278 EPRSP07814 1512 aaKnown RBP24.33■■□□□ 1.49
CDC42SE1-203ENST00000470278 KDM4FA0A1W2PPD8 638 aa24.32■■□□□ 1.48
CDC42SE1-203ENST00000470278 COL17A1Q9UMD9 1497 aaPredicted RBP24.32■■□□□ 1.48
CDC42SE1-203ENST00000470278 ARHGAP35Q9NRY4 1499 aa24.26■■□□□ 1.47
CDC42SE1-203ENST00000470278 ABCA8O94911 1581 aa24.25■■□□□ 1.47
CDC42SE1-203ENST00000470278 FHOD3Q2V2M9 1422 aa24.2■■□□□ 1.46
CDC42SE1-203ENST00000470278 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
CDC42SE1-203ENST00000470278 CLIP1P30622 1438 aa24.18■■□□□ 1.46
CDC42SE1-203ENST00000470278 RANGAP1P46060 587 aaPredicted RBP24.17■■□□□ 1.46
CDC42SE1-203ENST00000470278 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
CDC42SE1-203ENST00000470278 CEP162Q5TB80 1403 aa24.15■■□□□ 1.46
CDC42SE1-203ENST00000470278 P3H3Q8IVL6 736 aa24.14■■□□□ 1.45
CDC42SE1-203ENST00000470278 CFAP43Q8NDM7 1665 aa24.13■■□□□ 1.45
CDC42SE1-203ENST00000470278 ADGRL1O94910 1474 aa24.13■■□□□ 1.45
CDC42SE1-203ENST00000470278 RAPGEF6Q8TEU7 1601 aa24.12■■□□□ 1.45
CDC42SE1-203ENST00000470278 FMN1Q68DA7 1419 aa24.11■■□□□ 1.45
CDC42SE1-203ENST00000470278 TEX14Q8IWB6 1497 aa24.1■■□□□ 1.45
CDC42SE1-203ENST00000470278 MAGI3Q5TCQ9 1506 aa24.05■■□□□ 1.44
CDC42SE1-203ENST00000470278 NUP153P49790 1475 aaKnown RBP24.01■■□□□ 1.43
CDC42SE1-203ENST00000470278 HECW1Q76N89 1606 aa24■■□□□ 1.43
CDC42SE1-203ENST00000470278 PCF11O94913 1555 aaKnown RBP23.98■■□□□ 1.43
CDC42SE1-203ENST00000470278 CD109Q6YHK3 1445 aa23.97■■□□□ 1.43
CDC42SE1-203ENST00000470278 ATP10BO94823 1461 aa23.96■■□□□ 1.43
CDC42SE1-203ENST00000470278 FYCO1Q9BQS8 1478 aa23.95■■□□□ 1.42
CDC42SE1-203ENST00000470278 CASKIN1Q8WXD9 1431 aa23.95■■□□□ 1.42
CDC42SE1-203ENST00000470278 ABCA9Q8IUA7 1624 aa23.95■■□□□ 1.42
CDC42SE1-203ENST00000470278 HECW2Q9P2P5 1572 aa23.89■■□□□ 1.41
CDC42SE1-203ENST00000470278 LRRIQ1Q96JM4 1722 aa23.89■■□□□ 1.41
CDC42SE1-203ENST00000470278 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
CDC42SE1-203ENST00000470278 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
CDC42SE1-203ENST00000470278 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
CDC42SE1-203ENST00000470278 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
CDC42SE1-203ENST00000470278 FRMPD1Q5SYB0 1578 aa23.85■■□□□ 1.41
CDC42SE1-203ENST00000470278 CDK13Q14004 1512 aaKnown RBP23.84■■□□□ 1.41
CDC42SE1-203ENST00000470278 ARID3CA6NKF2 412 aa23.84■■□□□ 1.41
CDC42SE1-203ENST00000470278 ADAMTSL3P82987 1691 aa23.76■■□□□ 1.39
CDC42SE1-203ENST00000470278 ATP1B4Q9UN42 357 aaPredicted RBP23.73■■□□□ 1.39
CDC42SE1-203ENST00000470278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
CDC42SE1-203ENST00000470278 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
CDC42SE1-203ENST00000470278 RICTORQ6R327 1708 aa23.71■■□□□ 1.39
CDC42SE1-203ENST00000470278 NEO1Q92859 1461 aa23.71■■□□□ 1.39
CDC42SE1-203ENST00000470278 PLEKHD1A6NEE1 506 aa23.69■■□□□ 1.38
CDC42SE1-203ENST00000470278 CDK11AQ9UQ88 783 aaPredicted RBP23.69■■□□□ 1.38
CDC42SE1-203ENST00000470278 TTC37Q6PGP7 1564 aa23.69■■□□□ 1.38
CDC42SE1-203ENST00000470278 TROQ12816 1431 aaPredicted RBP23.68■■□□□ 1.38
CDC42SE1-203ENST00000470278 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
CDC42SE1-203ENST00000470278 TIAM1Q13009 1591 aa23.67■■□□□ 1.38
CDC42SE1-203ENST00000470278 BCORL1Q5H9F3 1711 aa23.67■■□□□ 1.38
CDC42SE1-203ENST00000470278 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
CDC42SE1-203ENST00000470278 PHLDB1Q86UU1 1377 aa23.65■■□□□ 1.38
CDC42SE1-203ENST00000470278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.65■■□□□ 1.384e-7■■□□□ 13.5
CDC42SE1-203ENST00000470278 KIF14Q15058 1648 aa23.65■■□□□ 1.38
CDC42SE1-203ENST00000470278 ARHGEF40Q8TER5 1519 aa23.64■■□□□ 1.38
CDC42SE1-203ENST00000470278 RAPGEF3O95398 923 aa23.63■■□□□ 1.37
CDC42SE1-203ENST00000470278 ILDR1Q86SU0 546 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms