RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 NPM1P06748 294 aaKnown RBP eCLIP34.1■■■■□ 3.05
NCKIPSD-209ENST00000470006 FAM69CQ0P6D2 419 aa34.09■■■■□ 3.05
NCKIPSD-209ENST00000470006 ABCC10Q5T3U5 1492 aa33.96■■■■□ 3.03
NCKIPSD-209ENST00000470006 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
NCKIPSD-209ENST00000470006 MAPKBP1O60336 1514 aa33.86■■■■□ 3.01
NCKIPSD-209ENST00000470006 DIP2BQ9P265 1576 aa33.84■■■■□ 3.01
NCKIPSD-209ENST00000470006 ADCY10Q96PN6 1610 aa33.82■■■■□ 3
NCKIPSD-209ENST00000470006 KDM6BO15054 1643 aa33.79■■■■□ 3
NCKIPSD-209ENST00000470006 TSPOAP1O95153 1857 aa33.79■■■■□ 3
NCKIPSD-209ENST00000470006 KDM4FA0A1W2PPD8 638 aa33.73■■■□□ 2.99
NCKIPSD-209ENST00000470006 TTBK1Q5TCY1 1321 aaPredicted RBP33.69■■■□□ 2.98
NCKIPSD-209ENST00000470006 KIAA0586Q9BVV6 1533 aa33.68■■■□□ 2.98
NCKIPSD-209ENST00000470006 IGF1RP08069 1367 aa33.58■■■□□ 2.97
NCKIPSD-209ENST00000470006 PTPRGP23470 1445 aa33.57■■■□□ 2.96
NCKIPSD-209ENST00000470006 KIF27Q86VH2 1401 aa33.54■■■□□ 2.96
NCKIPSD-209ENST00000470006 CUL7Q14999 1698 aa33.54■■■□□ 2.96
NCKIPSD-209ENST00000470006 CARMIL2Q6F5E8 1435 aa33.45■■■□□ 2.94
NCKIPSD-209ENST00000470006 ILDR1Q86SU0 546 aaPredicted RBP33.44■■■□□ 2.94
NCKIPSD-209ENST00000470006 TNIKQ9UKE5 1360 aa33.42■■■□□ 2.94
NCKIPSD-209ENST00000470006 ABCC2Q92887 1545 aa33.42■■■□□ 2.94
NCKIPSD-209ENST00000470006 ASXL2Q76L83 1435 aa33.4■■■□□ 2.94
NCKIPSD-209ENST00000470006 CARMIL1Q5VZK9 1371 aa33.38■■■□□ 2.93
NCKIPSD-209ENST00000470006 PLB1Q6P1J6 1458 aa33.37■■■□□ 2.93
NCKIPSD-209ENST00000470006 ADGRL1O94910 1474 aa33.31■■■□□ 2.92
NCKIPSD-209ENST00000470006 GLI2P10070 1586 aa33.31■■■□□ 2.92
NCKIPSD-209ENST00000470006 PPRC1Q5VV67 1664 aaKnown RBP33.31■■■□□ 2.92
NCKIPSD-209ENST00000470006 IQGAP2Q13576 1575 aa33.28■■■□□ 2.92
NCKIPSD-209ENST00000470006 UACAQ9BZF9 1416 aa33.26■■■□□ 2.91
NCKIPSD-209ENST00000470006 UHRF1BP1LA0JNW5 1464 aa33.24■■■□□ 2.91
NCKIPSD-209ENST00000470006 EPRSP07814 1512 aaKnown RBP33.17■■■□□ 2.9
NCKIPSD-209ENST00000470006 COL17A1Q9UMD9 1497 aaPredicted RBP33.16■■■□□ 2.9
NCKIPSD-209ENST00000470006 TEX14Q8IWB6 1497 aa33.15■■■□□ 2.9
NCKIPSD-209ENST00000470006 DISP1Q96F81 1524 aa33.13■■■□□ 2.89
NCKIPSD-209ENST00000470006 MAP3K4Q9Y6R4 1608 aa33.13■■■□□ 2.89
NCKIPSD-209ENST00000470006 KDM5BQ9UGL1 1544 aa33.1■■■□□ 2.89
NCKIPSD-209ENST00000470006 ZCCHC11Q5TAX3 1644 aaKnown RBP33.09■■■□□ 2.89
NCKIPSD-209ENST00000470006 HECW2Q9P2P5 1572 aa33.06■■■□□ 2.88
NCKIPSD-209ENST00000470006 UGGT2Q9NYU1 1516 aa33■■■□□ 2.87
NCKIPSD-209ENST00000470006 RAPGEF2Q9Y4G8 1499 aa32.99■■■□□ 2.87
NCKIPSD-209ENST00000470006 KIAA0556O60303 1618 aa32.97■■■□□ 2.87
NCKIPSD-209ENST00000470006 WDR7Q9Y4E6 1490 aa32.94■■■□□ 2.86
NCKIPSD-209ENST00000470006 KCNH8Q96L42 1107 aa32.93■■■□□ 2.86
NCKIPSD-209ENST00000470006 CD109Q6YHK3 1445 aa32.87■■■□□ 2.85
NCKIPSD-209ENST00000470006 CFAP43Q8NDM7 1665 aa32.8■■■□□ 2.84
NCKIPSD-209ENST00000470006 MAGI3Q5TCQ9 1506 aa32.78■■■□□ 2.84
NCKIPSD-209ENST00000470006 GOLGA3Q08378 1498 aa32.75■■■□□ 2.83
NCKIPSD-209ENST00000470006 CTTNBP2Q8WZ74 1663 aa32.75■■■□□ 2.83
NCKIPSD-209ENST00000470006 KIF21BO75037 1637 aa32.71■■■□□ 2.83
NCKIPSD-209ENST00000470006 ABCA8O94911 1581 aa32.69■■■□□ 2.82
NCKIPSD-209ENST00000470006 FAM9AQ8IZU1 332 aaPredicted RBP32.67■■■□□ 2.82
NCKIPSD-209ENST00000470006 ARID3CA6NKF2 412 aa32.66■■■□□ 2.82
NCKIPSD-209ENST00000470006 FBXO41Q8TF61 875 aa32.59■■■□□ 2.81
NCKIPSD-209ENST00000470006 ARAP3Q8WWN8 1544 aa32.55■■■□□ 2.8
NCKIPSD-209ENST00000470006 P3H3Q8IVL6 736 aa32.54■■■□□ 2.8
NCKIPSD-209ENST00000470006 RAPGEF3O95398 923 aa32.47■■■□□ 2.79
NCKIPSD-209ENST00000470006 PTPRMP28827 1452 aa32.47■■■□□ 2.79
NCKIPSD-209ENST00000470006 ATP10BO94823 1461 aa32.46■■■□□ 2.79
NCKIPSD-209ENST00000470006 ARID4BQ4LE39 1312 aaPredicted RBP32.46■■■□□ 2.79
NCKIPSD-209ENST00000470006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.44■■■□□ 2.78
NCKIPSD-209ENST00000470006 HNRNPUL2Q1KMD3 747 aaKnown RBP32.44■■■□□ 2.78
NCKIPSD-209ENST00000470006 PHLDB1Q86UU1 1377 aa32.44■■■□□ 2.78
NCKIPSD-209ENST00000470006 ADAMTSL3P82987 1691 aa32.42■■■□□ 2.78
NCKIPSD-209ENST00000470006 PRXQ9BXM0 1461 aa32.41■■■□□ 2.78
NCKIPSD-209ENST00000470006 ABCA9Q8IUA7 1624 aa32.4■■■□□ 2.78
NCKIPSD-209ENST00000470006 NEO1Q92859 1461 aa32.32■■■□□ 2.76
NCKIPSD-209ENST00000470006 BCORL1Q5H9F3 1711 aa32.31■■■□□ 2.76
NCKIPSD-209ENST00000470006 MADDQ8WXG6 1647 aa32.29■■■□□ 2.76
NCKIPSD-209ENST00000470006 PCF11O94913 1555 aaKnown RBP32.27■■■□□ 2.76
NCKIPSD-209ENST00000470006 RAPGEF6Q8TEU7 1601 aa32.26■■■□□ 2.76
NCKIPSD-209ENST00000470006 PLPPR3Q6T4P5 718 aa32.26■■■□□ 2.75
NCKIPSD-209ENST00000470006 RANGAP1P46060 587 aaPredicted RBP32.22■■■□□ 2.75
NCKIPSD-209ENST00000470006 FRMPD1Q5SYB0 1578 aa32.22■■■□□ 2.75
NCKIPSD-209ENST00000470006 LMTK3Q96Q04 1460 aa32.2■■■□□ 2.75
NCKIPSD-209ENST00000470006 RIMS1Q86UR5 1692 aaKnown RBP32.19■■■□□ 2.74
NCKIPSD-209ENST00000470006 SAMD9Q5K651 1589 aa32.18■■■□□ 2.74
NCKIPSD-209ENST00000470006 DENND4BO75064 1496 aaPredicted RBP32.15■■■□□ 2.74
NCKIPSD-209ENST00000470006 HSPA2P54652 639 aa32.14■■■□□ 2.74
NCKIPSD-209ENST00000470006 PLEKHD1A6NEE1 506 aa32.13■■■□□ 2.73
NCKIPSD-209ENST00000470006 ARHGEF40Q8TER5 1519 aa32.12■■■□□ 2.73
NCKIPSD-209ENST00000470006 NUP153P49790 1475 aaKnown RBP32.11■■■□□ 2.73
NCKIPSD-209ENST00000470006 CSRNP3Q8WYN3 585 aa32.11■■■□□ 2.73
NCKIPSD-209ENST00000470006 AKNAQ7Z591 1439 aa32.09■■■□□ 2.73
NCKIPSD-209ENST00000470006 POGZQ7Z3K3 1410 aa32.08■■■□□ 2.73
NCKIPSD-209ENST00000470006 RICTORQ6R327 1708 aa32.07■■■□□ 2.72
NCKIPSD-209ENST00000470006 FANCAO15360 1455 aa32.05■■■□□ 2.72
NCKIPSD-209ENST00000470006 FHOD3Q2V2M9 1422 aa32.04■■■□□ 2.72
NCKIPSD-209ENST00000470006 MLECQ14165 292 aa32.04■■■□□ 2.72
NCKIPSD-209ENST00000470006 CFAP74Q9C0B2 1584 aa32.03■■■□□ 2.72
NCKIPSD-209ENST00000470006 ZFYVE16Q7Z3T8 1539 aa31.97■■■□□ 2.71
NCKIPSD-209ENST00000470006 CERKQ8TCT0 537 aa31.97■■■□□ 2.71
NCKIPSD-209ENST00000470006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.96■■■□□ 2.71
NCKIPSD-209ENST00000470006 EFCAB5A4FU69 1503 aa31.95■■■□□ 2.7
NCKIPSD-209ENST00000470006 YEATS2Q9ULM3 1422 aa31.94■■■□□ 2.7
NCKIPSD-209ENST00000470006 ZMYM4Q5VZL5 1548 aa31.91■■■□□ 2.7
NCKIPSD-209ENST00000470006 TTC37Q6PGP7 1564 aa31.91■■■□□ 2.7
NCKIPSD-209ENST00000470006 FER1L4A9Z1Z3 1794 aa31.9■■■□□ 2.7
NCKIPSD-209ENST00000470006 SIGLEC1Q9BZZ2 1709 aa31.89■■■□□ 2.69
NCKIPSD-209ENST00000470006 MAGI2Q86UL8 1455 aa31.88■■■□□ 2.69
NCKIPSD-209ENST00000470006 HECW1Q76N89 1606 aa31.86■■■□□ 2.69
NCKIPSD-209ENST00000470006 SCAPERQ9BY12 1400 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms