RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 ARAP1Q96P48 1450 aa14.08□□□□□ -0.16
TRAPPC3-206ENST00000469757 RAPGEF2Q9Y4G8 1499 aa14.08□□□□□ -0.16
TRAPPC3-206ENST00000469757 CHIC1Q5VXU3 224 aa14.05□□□□□ -0.16
TRAPPC3-206ENST00000469757 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
TRAPPC3-206ENST00000469757 CTTNBP2Q8WZ74 1663 aa14.04□□□□□ -0.16
TRAPPC3-206ENST00000469757 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
TRAPPC3-206ENST00000469757 KIF21BO75037 1637 aa14.02□□□□□ -0.16
TRAPPC3-206ENST00000469757 UGGT2Q9NYU1 1516 aa13.99□□□□□ -0.17
TRAPPC3-206ENST00000469757 PRG4Q92954 1404 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC3-206ENST00000469757 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
TRAPPC3-206ENST00000469757 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
TRAPPC3-206ENST00000469757 KIAA0556O60303 1618 aa13.93□□□□□ -0.18
TRAPPC3-206ENST00000469757 JPH4Q96JJ6 628 aa13.92□□□□□ -0.18
TRAPPC3-206ENST00000469757 SAMD9Q5K651 1589 aa13.88□□□□□ -0.19
TRAPPC3-206ENST00000469757 CARMIL2Q6F5E8 1435 aa13.88□□□□□ -0.19
TRAPPC3-206ENST00000469757 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
TRAPPC3-206ENST00000469757 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
TRAPPC3-206ENST00000469757 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
TRAPPC3-206ENST00000469757 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.19
TRAPPC3-206ENST00000469757 EFCAB5A4FU69 1503 aa13.82□□□□□ -0.2
TRAPPC3-206ENST00000469757 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
TRAPPC3-206ENST00000469757 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
TRAPPC3-206ENST00000469757 ABCC2Q92887 1545 aa13.8□□□□□ -0.2
TRAPPC3-206ENST00000469757 PTPRGP23470 1445 aa13.78□□□□□ -0.2
TRAPPC3-206ENST00000469757 ABCA8O94911 1581 aa13.77□□□□□ -0.21
TRAPPC3-206ENST00000469757 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC3-206ENST00000469757 UACAQ9BZF9 1416 aa13.74□□□□□ -0.21
TRAPPC3-206ENST00000469757 KDM5BQ9UGL1 1544 aa13.73□□□□□ -0.21
TRAPPC3-206ENST00000469757 PLB1Q6P1J6 1458 aa13.7□□□□□ -0.22
TRAPPC3-206ENST00000469757 ZCCHC11Q5TAX3 1644 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-206ENST00000469757 RAPGEF6Q8TEU7 1601 aa13.68□□□□□ -0.22
TRAPPC3-206ENST00000469757 ARHGAP35Q9NRY4 1499 aa13.68□□□□□ -0.22
TRAPPC3-206ENST00000469757 DIP2BQ9P265 1576 aa13.68□□□□□ -0.22
TRAPPC3-206ENST00000469757 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
TRAPPC3-206ENST00000469757 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
TRAPPC3-206ENST00000469757 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
TRAPPC3-206ENST00000469757 NUP153P49790 1475 aaKnown RBP13.62□□□□□ -0.23
TRAPPC3-206ENST00000469757 GLI2P10070 1586 aa13.62□□□□□ -0.23
TRAPPC3-206ENST00000469757 UBTFP17480 764 aaKnown RBP13.61□□□□□ -0.23
TRAPPC3-206ENST00000469757 ASXL2Q76L83 1435 aa13.61□□□□□ -0.23
TRAPPC3-206ENST00000469757 FMN1Q68DA7 1419 aa13.6□□□□□ -0.23
TRAPPC3-206ENST00000469757 HECW1Q76N89 1606 aa13.6□□□□□ -0.23
TRAPPC3-206ENST00000469757 WDR7Q9Y4E6 1490 aa13.6□□□□□ -0.23
TRAPPC3-206ENST00000469757 CLIP1P30622 1438 aa13.57□□□□□ -0.24
TRAPPC3-206ENST00000469757 PCF11O94913 1555 aaKnown RBP13.57□□□□□ -0.24
TRAPPC3-206ENST00000469757 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
TRAPPC3-206ENST00000469757 ATP10BO94823 1461 aa13.56□□□□□ -0.24
TRAPPC3-206ENST00000469757 EPRSP07814 1512 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-206ENST00000469757 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRAPPC3-206ENST00000469757 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
TRAPPC3-206ENST00000469757 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
TRAPPC3-206ENST00000469757 TTBK1Q5TCY1 1321 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC3-206ENST00000469757 FYCO1Q9BQS8 1478 aa13.54□□□□□ -0.24
TRAPPC3-206ENST00000469757 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
TRAPPC3-206ENST00000469757 LRRIQ1Q96JM4 1722 aa13.53□□□□□ -0.24
TRAPPC3-206ENST00000469757 CFAP43Q8NDM7 1665 aa13.53□□□□□ -0.24
TRAPPC3-206ENST00000469757 CASKIN1Q8WXD9 1431 aa13.52□□□□□ -0.25
TRAPPC3-206ENST00000469757 ABCA9Q8IUA7 1624 aa13.51□□□□□ -0.25
TRAPPC3-206ENST00000469757 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
TRAPPC3-206ENST00000469757 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
TRAPPC3-206ENST00000469757 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC3-206ENST00000469757 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
TRAPPC3-206ENST00000469757 RANGAP1P46060 587 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC3-206ENST00000469757 MAGI3Q5TCQ9 1506 aa13.46□□□□□ -0.25
TRAPPC3-206ENST00000469757 FAM69CQ0P6D2 419 aa13.45□□□□□ -0.26
TRAPPC3-206ENST00000469757 TEX14Q8IWB6 1497 aa13.43□□□□□ -0.26
TRAPPC3-206ENST00000469757 TTC37Q6PGP7 1564 aa13.43□□□□□ -0.26
TRAPPC3-206ENST00000469757 KIF14Q15058 1648 aa13.42□□□□□ -0.26
TRAPPC3-206ENST00000469757 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
TRAPPC3-206ENST00000469757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.41□□□□□ -0.26
TRAPPC3-206ENST00000469757 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC3-206ENST00000469757 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
TRAPPC3-206ENST00000469757 ARAP3Q8WWN8 1544 aa13.4□□□□□ -0.26
TRAPPC3-206ENST00000469757 KDM6BO15054 1643 aa13.4□□□□□ -0.26
TRAPPC3-206ENST00000469757 CFAP74Q9C0B2 1584 aa13.38□□□□□ -0.27
TRAPPC3-206ENST00000469757 CD109Q6YHK3 1445 aa13.38□□□□□ -0.27
TRAPPC3-206ENST00000469757 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
TRAPPC3-206ENST00000469757 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
TRAPPC3-206ENST00000469757 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
TRAPPC3-206ENST00000469757 NEO1Q92859 1461 aa13.36□□□□□ -0.27
TRAPPC3-206ENST00000469757 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
TRAPPC3-206ENST00000469757 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
TRAPPC3-206ENST00000469757 PREX2Q70Z35 1606 aa13.35□□□□□ -0.27
TRAPPC3-206ENST00000469757 MAP3K1Q13233 1512 aa13.34□□□□□ -0.27
TRAPPC3-206ENST00000469757 PLEKHD1A6NEE1 506 aa13.33□□□□□ -0.28
TRAPPC3-206ENST00000469757 FRMPD1Q5SYB0 1578 aa13.32□□□□□ -0.28
TRAPPC3-206ENST00000469757 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
TRAPPC3-206ENST00000469757 CDK11AQ9UQ88 783 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC3-206ENST00000469757 COL17A1Q9UMD9 1497 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC3-206ENST00000469757 PLCH2O75038 1416 aa13.3□□□□□ -0.28
TRAPPC3-206ENST00000469757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC3-206ENST00000469757 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
TRAPPC3-206ENST00000469757 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
TRAPPC3-206ENST00000469757 CDC42BPAQ5VT25 1732 aa13.29□□□□□ -0.28
TRAPPC3-206ENST00000469757 FANCAO15360 1455 aa13.29□□□□□ -0.28
TRAPPC3-206ENST00000469757 RICTORQ6R327 1708 aa13.27□□□□□ -0.28
TRAPPC3-206ENST00000469757 CDC42BPBQ9Y5S2 1711 aa13.27□□□□□ -0.28
TRAPPC3-206ENST00000469757 ZMYM4Q5VZL5 1548 aa13.27□□□□□ -0.29
TRAPPC3-206ENST00000469757 ITSN2Q9NZM3 1697 aa13.26□□□□□ -0.29
TRAPPC3-206ENST00000469757 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms