RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
PMPCB-207ENST00000469560 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
PMPCB-207ENST00000469560 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
PMPCB-207ENST00000469560 EEA1Q15075 1411 aa11.66□□□□□ -0.54
PMPCB-207ENST00000469560 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
PMPCB-207ENST00000469560 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
PMPCB-207ENST00000469560 EIF4G3O43432 1585 aaKnown RBP11.64□□□□□ -0.55
PMPCB-207ENST00000469560 RAPGEF2Q9Y4G8 1499 aa11.63□□□□□ -0.55
PMPCB-207ENST00000469560 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
PMPCB-207ENST00000469560 ZBTB22O15209 634 aa11.61□□□□□ -0.55
PMPCB-207ENST00000469560 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
PMPCB-207ENST00000469560 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
PMPCB-207ENST00000469560 SP7Q8TDD2 431 aaPredicted RBP11.6□□□□□ -0.55
PMPCB-207ENST00000469560 KIF21BO75037 1637 aa11.6□□□□□ -0.55
PMPCB-207ENST00000469560 ERICH3Q5RHP9 1530 aa11.59□□□□□ -0.55
PMPCB-207ENST00000469560 U3KPZ7 1027 aaPredicted RBP11.59□□□□□ -0.55
PMPCB-207ENST00000469560 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
PMPCB-207ENST00000469560 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
PMPCB-207ENST00000469560 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
PMPCB-207ENST00000469560 ADAMTS12P58397 1594 aa11.55□□□□□ -0.56
PMPCB-207ENST00000469560 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
PMPCB-207ENST00000469560 CUL7Q14999 1698 aa11.53□□□□□ -0.56
PMPCB-207ENST00000469560 FHAD1B1AJZ9 1412 aa11.51□□□□□ -0.57
PMPCB-207ENST00000469560 TNIKQ9UKE5 1360 aa11.5□□□□□ -0.57
PMPCB-207ENST00000469560 MAGI1Q96QZ7 1491 aaPredicted RBP11.48□□□□□ -0.57
PMPCB-207ENST00000469560 PLSCR2Q9NRY7 297 aa11.47□□□□□ -0.57
PMPCB-207ENST00000469560 SYNJ2O15056 1496 aa11.47□□□□□ -0.57
PMPCB-207ENST00000469560 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
PMPCB-207ENST00000469560 GRIN2AQ12879 1464 aa11.46□□□□□ -0.58
PMPCB-207ENST00000469560 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
PMPCB-207ENST00000469560 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
PMPCB-207ENST00000469560 CHD1O14646 1710 aa11.44□□□□□ -0.58
PMPCB-207ENST00000469560 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
PMPCB-207ENST00000469560 NUP160Q12769 1436 aa11.41□□□□□ -0.58
PMPCB-207ENST00000469560 SPINK5Q9NQ38 1064 aaPredicted RBP11.41□□□□□ -0.58
PMPCB-207ENST00000469560 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.58
PMPCB-207ENST00000469560 FBLN2P98095 1184 aa11.39□□□□□ -0.59
PMPCB-207ENST00000469560 CHMP7Q8WUX9 453 aaPredicted RBP11.39□□□□□ -0.59
PMPCB-207ENST00000469560 RANGAP1P46060 587 aaPredicted RBP11.38□□□□□ -0.59
PMPCB-207ENST00000469560 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
PMPCB-207ENST00000469560 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
PMPCB-207ENST00000469560 CLIP1P30622 1438 aa11.37□□□□□ -0.59
PMPCB-207ENST00000469560 KIAA0586Q9BVV6 1533 aa11.36□□□□□ -0.59
PMPCB-207ENST00000469560 CAPN15O75808 1086 aa11.34□□□□□ -0.59
PMPCB-207ENST00000469560 IQGAP2Q13576 1575 aa11.34□□□□□ -0.59
PMPCB-207ENST00000469560 SAMD9Q5K651 1589 aa11.33□□□□□ -0.6
PMPCB-207ENST00000469560 CLASP1Q7Z460 1538 aa11.33□□□□□ -0.6
PMPCB-207ENST00000469560 DISP1Q96F81 1524 aa11.33□□□□□ -0.6
PMPCB-207ENST00000469560 UGGT2Q9NYU1 1516 aa11.32□□□□□ -0.6
PMPCB-207ENST00000469560 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
PMPCB-207ENST00000469560 P3H3Q8IVL6 736 aa11.31□□□□□ -0.6
PMPCB-207ENST00000469560 ERCC6L2Q5T890 1561 aa11.31□□□□□ -0.6
PMPCB-207ENST00000469560 FHOD3Q2V2M9 1422 aa11.3□□□□□ -0.6
PMPCB-207ENST00000469560 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
PMPCB-207ENST00000469560 JPH4Q96JJ6 628 aa11.28□□□□□ -0.6
PMPCB-207ENST00000469560 KIAA0556O60303 1618 aa11.26□□□□□ -0.61
PMPCB-207ENST00000469560 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
PMPCB-207ENST00000469560 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
PMPCB-207ENST00000469560 FOXD4L1Q9NU39 408 aa11.24□□□□□ -0.61
PMPCB-207ENST00000469560 PRG4Q92954 1404 aaPredicted RBP11.23□□□□□ -0.61
PMPCB-207ENST00000469560 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
PMPCB-207ENST00000469560 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
PMPCB-207ENST00000469560 MYCNP04198 464 aaPredicted RBP11.2□□□□□ -0.62
PMPCB-207ENST00000469560 DSG3P32926 999 aa11.2□□□□□ -0.62
PMPCB-207ENST00000469560 LRRIQ1Q96JM4 1722 aa11.2□□□□□ -0.62
PMPCB-207ENST00000469560 PCF11O94913 1555 aaKnown RBP11.2□□□□□ -0.62
PMPCB-207ENST00000469560 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
PMPCB-207ENST00000469560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
PMPCB-207ENST00000469560 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
PMPCB-207ENST00000469560 PLB1Q6P1J6 1458 aa11.16□□□□□ -0.62
PMPCB-207ENST00000469560 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
PMPCB-207ENST00000469560 CASKIN1Q8WXD9 1431 aa11.16□□□□□ -0.62
PMPCB-207ENST00000469560 TTBK1Q5TCY1 1321 aaPredicted RBP11.15□□□□□ -0.62
PMPCB-207ENST00000469560 ABCB7O75027 752 aa11.15□□□□□ -0.62
PMPCB-207ENST00000469560 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
PMPCB-207ENST00000469560 ABCA8O94911 1581 aa11.13□□□□□ -0.63
PMPCB-207ENST00000469560 NUP153P49790 1475 aaKnown RBP11.13□□□□□ -0.63
PMPCB-207ENST00000469560 FMN1Q68DA7 1419 aa11.13□□□□□ -0.63
PMPCB-207ENST00000469560 CARMIL2Q6F5E8 1435 aa11.13□□□□□ -0.63
PMPCB-207ENST00000469560 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
PMPCB-207ENST00000469560 PTPRGP23470 1445 aa11.11□□□□□ -0.63
PMPCB-207ENST00000469560 MAGI3Q5TCQ9 1506 aa11.11□□□□□ -0.63
PMPCB-207ENST00000469560 CDK13Q14004 1512 aaKnown RBP11.11□□□□□ -0.63
PMPCB-207ENST00000469560 APLP2Q06481 763 aa11.1□□□□□ -0.63
PMPCB-207ENST00000469560 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
PMPCB-207ENST00000469560 RAPGEF6Q8TEU7 1601 aa11.1□□□□□ -0.63
PMPCB-207ENST00000469560 TIAM1Q13009 1591 aa11.1□□□□□ -0.63
PMPCB-207ENST00000469560 ARHGEF11O15085 1522 aa11.09□□□□□ -0.63
PMPCB-207ENST00000469560 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
PMPCB-207ENST00000469560 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
PMPCB-207ENST00000469560 EPRSP07814 1512 aaKnown RBP11.08□□□□□ -0.64
PMPCB-207ENST00000469560 CFAP43Q8NDM7 1665 aa11.08□□□□□ -0.64
PMPCB-207ENST00000469560 ATF5Q9Y2D1 282 aaPredicted RBP11.08□□□□□ -0.64
PMPCB-207ENST00000469560 RIMBP3CA6NJZ7 1639 aa11.07□□□□□ -0.64
PMPCB-207ENST00000469560 RIMBP3BA6NNM3 1639 aa11.07□□□□□ -0.64
PMPCB-207ENST00000469560 RIMBP3Q9UFD9 1639 aa11.07□□□□□ -0.64
PMPCB-207ENST00000469560 MAP3K1Q13233 1512 aa11.07□□□□□ -0.64
PMPCB-207ENST00000469560 ATP10BO94823 1461 aa11.06□□□□□ -0.64
PMPCB-207ENST00000469560 UACAQ9BZF9 1416 aa11.06□□□□□ -0.64
PMPCB-207ENST00000469560 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms