RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 IGF1RP08069 1367 aa21.73■■□□□ 1.07
ABCF1-204ENST00000468958 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
ABCF1-204ENST00000468958 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
ABCF1-204ENST00000468958 JPH4Q96JJ6 628 aa21.53■■□□□ 1.04
ABCF1-204ENST00000468958 KIAA0586Q9BVV6 1533 aa21.53■■□□□ 1.04
ABCF1-204ENST00000468958 RAPGEF2Q9Y4G8 1499 aa21.43■■□□□ 1.02
ABCF1-204ENST00000468958 IQGAP2Q13576 1575 aa21.43■■□□□ 1.02
ABCF1-204ENST00000468958 CTTNBP2Q8WZ74 1663 aa21.4■■□□□ 1.02
ABCF1-204ENST00000468958 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
ABCF1-204ENST00000468958 ADCY10Q96PN6 1610 aa21.38■■□□□ 1.01
ABCF1-204ENST00000468958 KIF13AQ9H1H9 1805 aa21.34■■□□□ 1.01
ABCF1-204ENST00000468958 PRXQ9BXM0 1461 aa21.34■■□□□ 1.01
ABCF1-204ENST00000468958 DISP1Q96F81 1524 aa21.33■■□□□ 1
ABCF1-204ENST00000468958 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
ABCF1-204ENST00000468958 KIAA0556O60303 1618 aa21.27■■□□□ 1
ABCF1-204ENST00000468958 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
ABCF1-204ENST00000468958 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
ABCF1-204ENST00000468958 PTPRGP23470 1445 aa21.22■□□□□ 0.99
ABCF1-204ENST00000468958 MAPKBP1O60336 1514 aa21.21■□□□□ 0.99
ABCF1-204ENST00000468958 TTBK1Q5TCY1 1321 aaPredicted RBP21.2■□□□□ 0.98
ABCF1-204ENST00000468958 DIP2BQ9P265 1576 aa21.17■□□□□ 0.98
ABCF1-204ENST00000468958 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
ABCF1-204ENST00000468958 EEA1Q15075 1411 aa21.13■□□□□ 0.97
ABCF1-204ENST00000468958 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
ABCF1-204ENST00000468958 ABCC10Q5T3U5 1492 aa21.13■□□□□ 0.97
ABCF1-204ENST00000468958 UHRF1BP1LA0JNW5 1464 aa21.12■□□□□ 0.97
ABCF1-204ENST00000468958 UACAQ9BZF9 1416 aa21.11■□□□□ 0.97
ABCF1-204ENST00000468958 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
ABCF1-204ENST00000468958 ZCCHC11Q5TAX3 1644 aaKnown RBP21.09■□□□□ 0.97
ABCF1-204ENST00000468958 KIF21BO75037 1637 aa21.08■□□□□ 0.97
ABCF1-204ENST00000468958 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.97
ABCF1-204ENST00000468958 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
ABCF1-204ENST00000468958 TSPOAP1O95153 1857 aa21.07■□□□□ 0.96
ABCF1-204ENST00000468958 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
ABCF1-204ENST00000468958 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
ABCF1-204ENST00000468958 ABCA8O94911 1581 aa21.06■□□□□ 0.96
ABCF1-204ENST00000468958 KDM5BQ9UGL1 1544 aa21.04■□□□□ 0.96
ABCF1-204ENST00000468958 FAM69CQ0P6D2 419 aa21.02■□□□□ 0.96
ABCF1-204ENST00000468958 ASXL2Q76L83 1435 aa21.02■□□□□ 0.96
ABCF1-204ENST00000468958 PPRC1Q5VV67 1664 aaKnown RBP21■□□□□ 0.95
ABCF1-204ENST00000468958 P3H3Q8IVL6 736 aa20.96■□□□□ 0.95
ABCF1-204ENST00000468958 GLI2P10070 1586 aa20.96■□□□□ 0.95
ABCF1-204ENST00000468958 PHF23Q9BUL5 403 aaPredicted RBP20.95■□□□□ 0.94
ABCF1-204ENST00000468958 MAP3K4Q9Y6R4 1608 aa20.92■□□□□ 0.94
ABCF1-204ENST00000468958 EPRSP07814 1512 aaKnown RBP20.91■□□□□ 0.94
ABCF1-204ENST00000468958 RAPGEF6Q8TEU7 1601 aa20.89■□□□□ 0.94
ABCF1-204ENST00000468958 RANGAP1P46060 587 aaPredicted RBP20.87■□□□□ 0.93
ABCF1-204ENST00000468958 EHMT2Q96KQ7 1210 aa20.87■□□□□ 0.93
ABCF1-204ENST00000468958 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
ABCF1-204ENST00000468958 KDM6BO15054 1643 aa20.86■□□□□ 0.93
ABCF1-204ENST00000468958 WDR7Q9Y4E6 1490 aa20.86■□□□□ 0.93
ABCF1-204ENST00000468958 EFCAB5A4FU69 1503 aa20.83■□□□□ 0.93
ABCF1-204ENST00000468958 ATP10BO94823 1461 aa20.83■□□□□ 0.93
ABCF1-204ENST00000468958 ARID3CA6NKF2 412 aa20.8■□□□□ 0.92
ABCF1-204ENST00000468958 CFAP43Q8NDM7 1665 aa20.8■□□□□ 0.92
ABCF1-204ENST00000468958 NUP153P49790 1475 aaKnown RBP20.79■□□□□ 0.92
ABCF1-204ENST00000468958 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
ABCF1-204ENST00000468958 UBTFP17480 764 aaKnown RBP20.74■□□□□ 0.91
ABCF1-204ENST00000468958 COL17A1Q9UMD9 1497 aaPredicted RBP20.74■□□□□ 0.91
ABCF1-204ENST00000468958 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
ABCF1-204ENST00000468958 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
ABCF1-204ENST00000468958 ABCA9Q8IUA7 1624 aa20.7■□□□□ 0.9
ABCF1-204ENST00000468958 TEX14Q8IWB6 1497 aa20.67■□□□□ 0.9
ABCF1-204ENST00000468958 MAGI3Q5TCQ9 1506 aa20.67■□□□□ 0.9
ABCF1-204ENST00000468958 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
ABCF1-204ENST00000468958 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
ABCF1-204ENST00000468958 HECW1Q76N89 1606 aa20.6■□□□□ 0.89
ABCF1-204ENST00000468958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.89
ABCF1-204ENST00000468958 HNRNPUL2Q1KMD3 747 aaKnown RBP20.58■□□□□ 0.89
ABCF1-204ENST00000468958 FMN1Q68DA7 1419 aa20.57■□□□□ 0.88
ABCF1-204ENST00000468958 TTC37Q6PGP7 1564 aa20.57■□□□□ 0.88
ABCF1-204ENST00000468958 PCF11O94913 1555 aaKnown RBP20.56■□□□□ 0.88
ABCF1-204ENST00000468958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.56■□□□□ 0.88
ABCF1-204ENST00000468958 KIF14Q15058 1648 aa20.5■□□□□ 0.87
ABCF1-204ENST00000468958 ARAP3Q8WWN8 1544 aa20.5■□□□□ 0.87
ABCF1-204ENST00000468958 FRMPD1Q5SYB0 1578 aa20.49■□□□□ 0.87
ABCF1-204ENST00000468958 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
ABCF1-204ENST00000468958 CLIP1P30622 1438 aa20.46■□□□□ 0.87
ABCF1-204ENST00000468958 KDM4FA0A1W2PPD8 638 aa20.46■□□□□ 0.87
ABCF1-204ENST00000468958 ATP1B4Q9UN42 357 aaPredicted RBP20.46■□□□□ 0.87
ABCF1-204ENST00000468958 NEO1Q92859 1461 aa20.45■□□□□ 0.86
ABCF1-204ENST00000468958 CASKIN1Q8WXD9 1431 aa20.44■□□□□ 0.86
ABCF1-204ENST00000468958 MYO5CQ9NQX4 1742 aa20.44■□□□□ 0.86
ABCF1-204ENST00000468958 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
ABCF1-204ENST00000468958 CFAP74Q9C0B2 1584 aa20.41■□□□□ 0.86
ABCF1-204ENST00000468958 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
ABCF1-204ENST00000468958 FANCAO15360 1455 aa20.39■□□□□ 0.85
ABCF1-204ENST00000468958 FYCO1Q9BQS8 1478 aa20.39■□□□□ 0.85
ABCF1-204ENST00000468958 TROQ12816 1431 aaPredicted RBP20.38■□□□□ 0.85
ABCF1-204ENST00000468958 CDC42BPBQ9Y5S2 1711 aa20.38■□□□□ 0.85
ABCF1-204ENST00000468958 PHLDB1Q86UU1 1377 aa20.37■□□□□ 0.85
ABCF1-204ENST00000468958 RAPGEF3O95398 923 aa20.37■□□□□ 0.85
ABCF1-204ENST00000468958 CCDC18Q5T9S5 1454 aa20.37■□□□□ 0.85
ABCF1-204ENST00000468958 AKNAQ7Z591 1439 aa20.36■□□□□ 0.85
ABCF1-204ENST00000468958 PLCH2O75038 1416 aa20.35■□□□□ 0.85
ABCF1-204ENST00000468958 CEP162Q5TB80 1403 aa20.35■□□□□ 0.85
ABCF1-204ENST00000468958 CDC42BPAQ5VT25 1732 aa20.33■□□□□ 0.85
ABCF1-204ENST00000468958 SIGLEC1Q9BZZ2 1709 aa20.32■□□□□ 0.84
ABCF1-204ENST00000468958 PREX2Q70Z35 1606 aa20.31■□□□□ 0.84
ABCF1-204ENST00000468958 LOC105371045A0A1W2PR82 267 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms