RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 JPH4Q96JJ6 628 aa27.76■■■□□ 2.03
SRRM1-207ENST00000468822 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
SRRM1-207ENST00000468822 ABCC10Q5T3U5 1492 aa27.59■■■□□ 2.01
SRRM1-207ENST00000468822 FAM69CQ0P6D2 419 aa27.58■■■□□ 2.01
SRRM1-207ENST00000468822 ADCY10Q96PN6 1610 aa27.56■■■□□ 2
SRRM1-207ENST00000468822 MAPKBP1O60336 1514 aa27.54■■■□□ 2
SRRM1-207ENST00000468822 DIP2BQ9P265 1576 aa27.52■■■□□ 2
SRRM1-207ENST00000468822 IGF1RP08069 1367 aa27.51■■□□□ 1.99
SRRM1-207ENST00000468822 NPM1P06748 294 aaKnown RBP eCLIP27.49■■□□□ 1.99
SRRM1-207ENST00000468822 KIAA0586Q9BVV6 1533 aa27.49■■□□□ 1.99
SRRM1-207ENST00000468822 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
SRRM1-207ENST00000468822 CUL7Q14999 1698 aa27.37■■□□□ 1.97
SRRM1-207ENST00000468822 KDM6BO15054 1643 aa27.33■■□□□ 1.97
SRRM1-207ENST00000468822 KDM4FA0A1W2PPD8 638 aa27.32■■□□□ 1.96
SRRM1-207ENST00000468822 TSPOAP1O95153 1857 aa27.32■■□□□ 1.96
SRRM1-207ENST00000468822 PTPRGP23470 1445 aa27.31■■□□□ 1.96
SRRM1-207ENST00000468822 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
SRRM1-207ENST00000468822 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
SRRM1-207ENST00000468822 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
SRRM1-207ENST00000468822 ABCC2Q92887 1545 aa27.21■■□□□ 1.95
SRRM1-207ENST00000468822 ASXL2Q76L83 1435 aa27.18■■□□□ 1.94
SRRM1-207ENST00000468822 CARMIL2Q6F5E8 1435 aa27.17■■□□□ 1.94
SRRM1-207ENST00000468822 IQGAP2Q13576 1575 aa27.16■■□□□ 1.94
SRRM1-207ENST00000468822 PPRC1Q5VV67 1664 aaKnown RBP27.14■■□□□ 1.94
SRRM1-207ENST00000468822 DISP1Q96F81 1524 aa27.13■■□□□ 1.93
SRRM1-207ENST00000468822 UHRF1BP1LA0JNW5 1464 aa27.12■■□□□ 1.93
SRRM1-207ENST00000468822 GLI2P10070 1586 aa27.11■■□□□ 1.93
SRRM1-207ENST00000468822 PLB1Q6P1J6 1458 aa27.11■■□□□ 1.93
SRRM1-207ENST00000468822 UACAQ9BZF9 1416 aa27.08■■□□□ 1.93
SRRM1-207ENST00000468822 COL17A1Q9UMD9 1497 aaPredicted RBP27.05■■□□□ 1.92
SRRM1-207ENST00000468822 KDM5BQ9UGL1 1544 aa27.01■■□□□ 1.91
SRRM1-207ENST00000468822 EPRSP07814 1512 aaKnown RBP27■■□□□ 1.91
SRRM1-207ENST00000468822 UGGT2Q9NYU1 1516 aa27■■□□□ 1.91
SRRM1-207ENST00000468822 RAPGEF2Q9Y4G8 1499 aa26.97■■□□□ 1.91
SRRM1-207ENST00000468822 ADGRL1O94910 1474 aa26.96■■□□□ 1.91
SRRM1-207ENST00000468822 MAP3K4Q9Y6R4 1608 aa26.96■■□□□ 1.91
SRRM1-207ENST00000468822 ZCCHC11Q5TAX3 1644 aaKnown RBP26.95■■□□□ 1.91
SRRM1-207ENST00000468822 KIAA0556O60303 1618 aa26.94■■□□□ 1.9
SRRM1-207ENST00000468822 TEX14Q8IWB6 1497 aa26.84■■□□□ 1.89
SRRM1-207ENST00000468822 WDR7Q9Y4E6 1490 aa26.83■■□□□ 1.89
SRRM1-207ENST00000468822 ILDR1Q86SU0 546 aaPredicted RBP26.83■■□□□ 1.89
SRRM1-207ENST00000468822 CTTNBP2Q8WZ74 1663 aa26.73■■□□□ 1.87
SRRM1-207ENST00000468822 ABCA8O94911 1581 aa26.73■■□□□ 1.87
SRRM1-207ENST00000468822 HECW2Q9P2P5 1572 aa26.71■■□□□ 1.87
SRRM1-207ENST00000468822 KCNH8Q96L42 1107 aa26.7■■□□□ 1.86
SRRM1-207ENST00000468822 CD109Q6YHK3 1445 aa26.7■■□□□ 1.86
SRRM1-207ENST00000468822 MAGI3Q5TCQ9 1506 aa26.7■■□□□ 1.86
SRRM1-207ENST00000468822 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
SRRM1-207ENST00000468822 CFAP43Q8NDM7 1665 aa26.66■■□□□ 1.86
SRRM1-207ENST00000468822 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
SRRM1-207ENST00000468822 ARID3CA6NKF2 412 aa26.58■■□□□ 1.85
SRRM1-207ENST00000468822 KIF21BO75037 1637 aa26.54■■□□□ 1.84
SRRM1-207ENST00000468822 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
SRRM1-207ENST00000468822 ATP10BO94823 1461 aa26.53■■□□□ 1.84
SRRM1-207ENST00000468822 ARAP3Q8WWN8 1544 aa26.5■■□□□ 1.83
SRRM1-207ENST00000468822 ABCA9Q8IUA7 1624 aa26.43■■□□□ 1.82
SRRM1-207ENST00000468822 SAMD9Q5K651 1589 aa26.39■■□□□ 1.82
SRRM1-207ENST00000468822 RAPGEF3O95398 923 aa26.39■■□□□ 1.82
SRRM1-207ENST00000468822 RAPGEF6Q8TEU7 1601 aa26.34■■□□□ 1.81
SRRM1-207ENST00000468822 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
SRRM1-207ENST00000468822 PHLDB1Q86UU1 1377 aa26.33■■□□□ 1.81
SRRM1-207ENST00000468822 PTPRMP28827 1452 aa26.33■■□□□ 1.81
SRRM1-207ENST00000468822 FRMPD1Q5SYB0 1578 aa26.32■■□□□ 1.8
SRRM1-207ENST00000468822 CSRNP3Q8WYN3 585 aa26.31■■□□□ 1.8
SRRM1-207ENST00000468822 NUP153P49790 1475 aaKnown RBP26.3■■□□□ 1.8
SRRM1-207ENST00000468822 NEO1Q92859 1461 aa26.3■■□□□ 1.8
SRRM1-207ENST00000468822 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
SRRM1-207ENST00000468822 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.26■■□□□ 1.79
SRRM1-207ENST00000468822 HNRNPUL2Q1KMD3 747 aaKnown RBP26.26■■□□□ 1.79
SRRM1-207ENST00000468822 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
SRRM1-207ENST00000468822 BCORL1Q5H9F3 1711 aa26.23■■□□□ 1.79
SRRM1-207ENST00000468822 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
SRRM1-207ENST00000468822 MADDQ8WXG6 1647 aa26.21■■□□□ 1.79
SRRM1-207ENST00000468822 ARID4BQ4LE39 1312 aaPredicted RBP26.18■■□□□ 1.78
SRRM1-207ENST00000468822 FBXO41Q8TF61 875 aa26.17■■□□□ 1.78
SRRM1-207ENST00000468822 ARHGEF40Q8TER5 1519 aa26.15■■□□□ 1.78
SRRM1-207ENST00000468822 LMTK3Q96Q04 1460 aa26.14■■□□□ 1.78
SRRM1-207ENST00000468822 RICTORQ6R327 1708 aa26.14■■□□□ 1.77
SRRM1-207ENST00000468822 PCF11O94913 1555 aaKnown RBP26.13■■□□□ 1.77
SRRM1-207ENST00000468822 AKNAQ7Z591 1439 aa26.13■■□□□ 1.77
SRRM1-207ENST00000468822 DENND4BO75064 1496 aaPredicted RBP26.12■■□□□ 1.77
SRRM1-207ENST00000468822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.11■■□□□ 1.77
SRRM1-207ENST00000468822 PLEKHD1A6NEE1 506 aa26.11■■□□□ 1.77
SRRM1-207ENST00000468822 FANCAO15360 1455 aa26.1■■□□□ 1.77
SRRM1-207ENST00000468822 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
SRRM1-207ENST00000468822 RIMS1Q86UR5 1692 aaKnown RBP26.09■■□□□ 1.77
SRRM1-207ENST00000468822 SIGLEC1Q9BZZ2 1709 aa26.08■■□□□ 1.76
SRRM1-207ENST00000468822 EEA1Q15075 1411 aa26.05■■□□□ 1.76
SRRM1-207ENST00000468822 YEATS2Q9ULM3 1422 aa26.05■■□□□ 1.76
SRRM1-207ENST00000468822 ZMYM4Q5VZL5 1548 aa26.03■■□□□ 1.76
SRRM1-207ENST00000468822 CDK13Q14004 1512 aaKnown RBP26.02■■□□□ 1.76
SRRM1-207ENST00000468822 HSPA2P54652 639 aa26.01■■□□□ 1.75
SRRM1-207ENST00000468822 CFAP74Q9C0B2 1584 aa26.01■■□□□ 1.75
SRRM1-207ENST00000468822 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
SRRM1-207ENST00000468822 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
SRRM1-207ENST00000468822 ZFYVE16Q7Z3T8 1539 aa25.98■■□□□ 1.75
SRRM1-207ENST00000468822 HECW1Q76N89 1606 aa25.96■■□□□ 1.75
SRRM1-207ENST00000468822 MLECQ14165 292 aa25.93■■□□□ 1.74
SRRM1-207ENST00000468822 POGZQ7Z3K3 1410 aa25.93■■□□□ 1.74
SRRM1-207ENST00000468822 MAGI2Q86UL8 1455 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms