RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.11e-13■■■■■ 36.3
MSH5-213ENST00000468136 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
MSH5-213ENST00000468136 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
MSH5-213ENST00000468136 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
MSH5-213ENST00000468136 EIF4G3O43432 1585 aaKnown RBP15.64■□□□□ 0.09
MSH5-213ENST00000468136 FMN1Q68DA7 1419 aa15.64■□□□□ 0.09
MSH5-213ENST00000468136 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
MSH5-213ENST00000468136 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
MSH5-213ENST00000468136 SNAPC4Q5SXM2 1469 aa15.59■□□□□ 0.09
MSH5-213ENST00000468136 SAMD9Q5K651 1589 aa15.59■□□□□ 0.09
MSH5-213ENST00000468136 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.09
MSH5-213ENST00000468136 HRCP23327 699 aa15.58■□□□□ 0.08
MSH5-213ENST00000468136 FYCO1Q9BQS8 1478 aa15.58■□□□□ 0.08
MSH5-213ENST00000468136 IQGAP2Q13576 1575 aa15.58■□□□□ 0.08
MSH5-213ENST00000468136 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
MSH5-213ENST00000468136 GRIN2AQ12879 1464 aa15.57■□□□□ 0.08
MSH5-213ENST00000468136 ZEB1P37275 1124 aaPredicted RBP15.56■□□□□ 0.08
MSH5-213ENST00000468136 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
MSH5-213ENST00000468136 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
MSH5-213ENST00000468136 CHMP7Q8WUX9 453 aaPredicted RBP15.53■□□□□ 0.08
MSH5-213ENST00000468136 FHOD3Q2V2M9 1422 aa15.51■□□□□ 0.07
MSH5-213ENST00000468136 TIAM1Q13009 1591 aa15.51■□□□□ 0.07
MSH5-213ENST00000468136 NUP160Q12769 1436 aa15.49■□□□□ 0.07
MSH5-213ENST00000468136 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
MSH5-213ENST00000468136 PCF11O94913 1555 aaKnown RBP15.46■□□□□ 0.07
MSH5-213ENST00000468136 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
MSH5-213ENST00000468136 CCDC18Q5T9S5 1454 aa15.45■□□□□ 0.06
MSH5-213ENST00000468136 RRBP1Q9P2E9 1410 aaKnown RBP15.44■□□□□ 0.06
MSH5-213ENST00000468136 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
MSH5-213ENST00000468136 CARMIL2Q6F5E8 1435 aa15.43■□□□□ 0.06
MSH5-213ENST00000468136 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
MSH5-213ENST00000468136 KIAA0556O60303 1618 aa15.39■□□□□ 0.05
MSH5-213ENST00000468136 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
MSH5-213ENST00000468136 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
MSH5-213ENST00000468136 TTBK1Q5TCY1 1321 aaPredicted RBP15.39■□□□□ 0.05
MSH5-213ENST00000468136 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
MSH5-213ENST00000468136 CCNB3Q8WWL7 1395 aa15.37■□□□□ 0.05
MSH5-213ENST00000468136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.37■□□□□ 0.05
MSH5-213ENST00000468136 FBLN2P98095 1184 aa15.36■□□□□ 0.05
MSH5-213ENST00000468136 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
MSH5-213ENST00000468136 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
MSH5-213ENST00000468136 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
MSH5-213ENST00000468136 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.05
MSH5-213ENST00000468136 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
MSH5-213ENST00000468136 EPRSP07814 1512 aaKnown RBP15.3■□□□□ 0.04
MSH5-213ENST00000468136 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.04
MSH5-213ENST00000468136 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
MSH5-213ENST00000468136 RAPGEF6Q8TEU7 1601 aa15.26■□□□□ 0.03
MSH5-213ENST00000468136 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
MSH5-213ENST00000468136 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
MSH5-213ENST00000468136 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
MSH5-213ENST00000468136 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
MSH5-213ENST00000468136 ARHGEF11O15085 1522 aa15.23■□□□□ 0.03
MSH5-213ENST00000468136 CHD1O14646 1710 aa15.23■□□□□ 0.03
MSH5-213ENST00000468136 NCOA2Q15596 1464 aa15.22■□□□□ 0.03
MSH5-213ENST00000468136 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
MSH5-213ENST00000468136 MYOM3Q5VTT5 1437 aa15.21■□□□□ 0.03
MSH5-213ENST00000468136 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
MSH5-213ENST00000468136 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
MSH5-213ENST00000468136 NUP153P49790 1475 aaKnown RBP15.2■□□□□ 0.02
MSH5-213ENST00000468136 MIA2Q96PC5 1412 aa15.2■□□□□ 0.02
MSH5-213ENST00000468136 LRRIQ1Q96JM4 1722 aa15.2■□□□□ 0.02
MSH5-213ENST00000468136 ACIN1Q9UKV3 1341 aaKnown RBP15.18■□□□□ 0.02
MSH5-213ENST00000468136 PTPRGP23470 1445 aa15.18■□□□□ 0.02
MSH5-213ENST00000468136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
MSH5-213ENST00000468136 ABCA8O94911 1581 aa15.18■□□□□ 0.02
MSH5-213ENST00000468136 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
MSH5-213ENST00000468136 TROQ12816 1431 aaPredicted RBP15.16■□□□□ 0.02
MSH5-213ENST00000468136 TCOF1Q13428 1488 aaKnown RBP15.14■□□□□ 0.01
MSH5-213ENST00000468136 CDK13Q14004 1512 aaKnown RBP15.14■□□□□ 0.01
MSH5-213ENST00000468136 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
MSH5-213ENST00000468136 PLB1Q6P1J6 1458 aa15.13■□□□□ 0.01
MSH5-213ENST00000468136 MAGI3Q5TCQ9 1506 aa15.12■□□□□ 0.01
MSH5-213ENST00000468136 UACAQ9BZF9 1416 aa15.11■□□□□ 0.01
MSH5-213ENST00000468136 SETD5Q9C0A6 1442 aa15.11■□□□□ 0.01
MSH5-213ENST00000468136 PLEKHD1A6NEE1 506 aa15.11■□□□□ 0.01
MSH5-213ENST00000468136 ADCY10Q96PN6 1610 aa15.1■□□□□ 0.01
MSH5-213ENST00000468136 PTPN23Q9H3S7 1636 aa15.08■□□□□ 0
MSH5-213ENST00000468136 AKNAQ7Z591 1439 aa15.08■□□□□ 0
MSH5-213ENST00000468136 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
MSH5-213ENST00000468136 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
MSH5-213ENST00000468136 ATP10BO94823 1461 aa15.07■□□□□ 0
MSH5-213ENST00000468136 ITSN2Q9NZM3 1697 aa15.04■□□□□ -0
MSH5-213ENST00000468136 ABCC2Q92887 1545 aa15.04■□□□□ -0
MSH5-213ENST00000468136 HFM1A2PYH4 1435 aa15.04■□□□□ -0
MSH5-213ENST00000468136 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
MSH5-213ENST00000468136 RAB3GAP2Q9H2M9 1393 aa15.03■□□□□ -0
MSH5-213ENST00000468136 ITGAEP38570 1179 aa15.03■□□□□ -0
MSH5-213ENST00000468136 KIF14Q15058 1648 aa15.02□□□□□ -0.01
MSH5-213ENST00000468136 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
MSH5-213ENST00000468136 ROCK1Q13464 1354 aa15□□□□□ -0.01
MSH5-213ENST00000468136 GPATCH8Q9UKJ3 1502 aaKnown RBP14.98□□□□□ -0.01
MSH5-213ENST00000468136 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
MSH5-213ENST00000468136 ABCC10Q5T3U5 1492 aa14.97□□□□□ -0.01
MSH5-213ENST00000468136 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
MSH5-213ENST00000468136 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
MSH5-213ENST00000468136 TIMELESSQ9UNS1 1208 aa14.96□□□□□ -0.01
MSH5-213ENST00000468136 KDM5BQ9UGL1 1544 aa14.96□□□□□ -0.02
MSH5-213ENST00000468136 NAIPQ13075 1403 aa14.94□□□□□ -0.02
MSH5-213ENST00000468136 DNMT1P26358 1616 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms