RNA–Protein interactions for RNA: ENST00000467750.5

GAPVD1-212, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-212ENST00000467750 MRC2Q9UBG0 1479 aa10.51□□□□□ -0.73
GAPVD1-212ENST00000467750 FHOD3Q2V2M9 1422 aa10.51□□□□□ -0.73
GAPVD1-212ENST00000467750 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-212ENST00000467750 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-212ENST00000467750 FAM50AQ14320 339 aaKnown RBP10.49□□□□□ -0.73
GAPVD1-212ENST00000467750 WDR97A6NE52 1622 aa10.42□□□□□ -0.74
GAPVD1-212ENST00000467750 RRBP1Q9P2E9 1410 aaKnown RBP10.42□□□□□ -0.74
GAPVD1-212ENST00000467750 MAP3K1Q13233 1512 aa10.41□□□□□ -0.74
GAPVD1-212ENST00000467750 CUL7Q14999 1698 aa10.39□□□□□ -0.75
GAPVD1-212ENST00000467750 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
GAPVD1-212ENST00000467750 GRIN2BQ13224 1484 aa10.39□□□□□ -0.75
GAPVD1-212ENST00000467750 IFT140Q96RY7 1462 aa10.39□□□□□ -0.75
GAPVD1-212ENST00000467750 SNAPC4Q5SXM2 1469 aa10.39□□□□□ -0.75
GAPVD1-212ENST00000467750 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
GAPVD1-212ENST00000467750 TARBP1Q13395 1621 aaKnown RBP10.38□□□□□ -0.75
GAPVD1-212ENST00000467750 MTUS2Q5JR59 1369 aa10.36□□□□□ -0.75
GAPVD1-212ENST00000467750 TIAM1Q13009 1591 aa10.36□□□□□ -0.75
GAPVD1-212ENST00000467750 EFCAB5A4FU69 1503 aa10.34□□□□□ -0.75
GAPVD1-212ENST00000467750 WDR62O43379 1518 aa10.34□□□□□ -0.75
GAPVD1-212ENST00000467750 LRRC9Q6ZRR7 1453 aa10.34□□□□□ -0.75
GAPVD1-212ENST00000467750 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
GAPVD1-212ENST00000467750 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
GAPVD1-212ENST00000467750 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
GAPVD1-212ENST00000467750 CASKIN1Q8WXD9 1431 aa10.32□□□□□ -0.76
GAPVD1-212ENST00000467750 PCF11O94913 1555 aaKnown RBP10.31□□□□□ -0.76
GAPVD1-212ENST00000467750 PHLDB1Q86UU1 1377 aa10.31□□□□□ -0.76
GAPVD1-212ENST00000467750 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
GAPVD1-212ENST00000467750 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
GAPVD1-212ENST00000467750 FYCO1Q9BQS8 1478 aa10.3□□□□□ -0.76
GAPVD1-212ENST00000467750 CTTNBP2Q8WZ74 1663 aa10.3□□□□□ -0.76
GAPVD1-212ENST00000467750 ZNF777Q9ULD5 760 aaPredicted RBP10.29□□□□□ -0.76
GAPVD1-212ENST00000467750 CLSPNQ9HAW4 1339 aa10.29□□□□□ -0.76
GAPVD1-212ENST00000467750 EIF4G3O43432 1585 aaKnown RBP10.29□□□□□ -0.76
GAPVD1-212ENST00000467750 CFAP43Q8NDM7 1665 aa10.29□□□□□ -0.76
GAPVD1-212ENST00000467750 SAMD9Q5K651 1589 aa10.29□□□□□ -0.76
GAPVD1-212ENST00000467750 PBRM1Q86U86 1689 aa10.28□□□□□ -0.76
GAPVD1-212ENST00000467750 THOC2Q8NI27 1593 aaKnown RBP10.27□□□□□ -0.76
GAPVD1-212ENST00000467750 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
GAPVD1-212ENST00000467750 GRIN2AQ12879 1464 aa10.27□□□□□ -0.77
GAPVD1-212ENST00000467750 ADAMTS12P58397 1594 aa10.27□□□□□ -0.77
GAPVD1-212ENST00000467750 RRP7BPQ9NSQ0 103 aa10.25□□□□□ -0.77
GAPVD1-212ENST00000467750 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
GAPVD1-212ENST00000467750 IQGAP2Q13576 1575 aa10.25□□□□□ -0.77
GAPVD1-212ENST00000467750 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
GAPVD1-212ENST00000467750 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
GAPVD1-212ENST00000467750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.23□□□□□ -0.77
GAPVD1-212ENST00000467750 KIAA0586Q9BVV6 1533 aa10.22□□□□□ -0.77
GAPVD1-212ENST00000467750 CDK13Q14004 1512 aaKnown RBP10.22□□□□□ -0.77
GAPVD1-212ENST00000467750 TRIM52Q96A61 297 aa10.21□□□□□ -0.77
GAPVD1-212ENST00000467750 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
GAPVD1-212ENST00000467750 RAB3GAP2Q9H2M9 1393 aa10.21□□□□□ -0.78
GAPVD1-212ENST00000467750 MAGI1Q96QZ7 1491 aaPredicted RBP10.21□□□□□ -0.78
GAPVD1-212ENST00000467750 KCNH8Q96L42 1107 aa10.2□□□□□ -0.78
GAPVD1-212ENST00000467750 ZNF644Q9H582 1327 aaPredicted RBP10.19□□□□□ -0.78
GAPVD1-212ENST00000467750 PLB1Q6P1J6 1458 aa10.19□□□□□ -0.78
GAPVD1-212ENST00000467750 SIN3AQ96ST3 1273 aa10.19□□□□□ -0.78
GAPVD1-212ENST00000467750 CARMIL2Q6F5E8 1435 aa10.19□□□□□ -0.78
GAPVD1-212ENST00000467750 SETD5Q9C0A6 1442 aa10.19□□□□□ -0.78
GAPVD1-212ENST00000467750 PLEKHD1A6NEE1 506 aa10.18□□□□□ -0.78
GAPVD1-212ENST00000467750 LRRIQ1Q96JM4 1722 aa10.17□□□□□ -0.78
GAPVD1-212ENST00000467750 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
GAPVD1-212ENST00000467750 NCOA2Q15596 1464 aa10.17□□□□□ -0.78
GAPVD1-212ENST00000467750 MAPKBP1O60336 1514 aa10.17□□□□□ -0.78
GAPVD1-212ENST00000467750 CEP170Q5SW79 1584 aa10.17□□□□□ -0.78
GAPVD1-212ENST00000467750 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
GAPVD1-212ENST00000467750 DISP1Q96F81 1524 aa10.16□□□□□ -0.78
GAPVD1-212ENST00000467750 UGGT2Q9NYU1 1516 aa10.16□□□□□ -0.78
GAPVD1-212ENST00000467750 EPRSP07814 1512 aaKnown RBP10.16□□□□□ -0.78
GAPVD1-212ENST00000467750 CFDP1Q9UEE9 299 aaPredicted RBP10.16□□□□□ -0.78
GAPVD1-212ENST00000467750 ARHGEF11O15085 1522 aa10.15□□□□□ -0.78
GAPVD1-212ENST00000467750 PTPRGP23470 1445 aa10.15□□□□□ -0.79
GAPVD1-212ENST00000467750 MAGI3Q5TCQ9 1506 aa10.14□□□□□ -0.79
GAPVD1-212ENST00000467750 PTPRKQ15262 1439 aa10.13□□□□□ -0.79
GAPVD1-212ENST00000467750 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
GAPVD1-212ENST00000467750 MYOM3Q5VTT5 1437 aa10.12□□□□□ -0.79
GAPVD1-212ENST00000467750 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
GAPVD1-212ENST00000467750 FOXD1Q16676 465 aa10.12□□□□□ -0.79
GAPVD1-212ENST00000467750 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
GAPVD1-212ENST00000467750 NUP160Q12769 1436 aa10.11□□□□□ -0.79
GAPVD1-212ENST00000467750 HIRIP3Q9BW71 556 aaPredicted RBP10.11□□□□□ -0.79
GAPVD1-212ENST00000467750 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
GAPVD1-212ENST00000467750 HECW1Q76N89 1606 aa10.1□□□□□ -0.79
GAPVD1-212ENST00000467750 MYT1LQ9UL68 1186 aa10.09□□□□□ -0.79
GAPVD1-212ENST00000467750 HFM1A2PYH4 1435 aa10.09□□□□□ -0.79
GAPVD1-212ENST00000467750 SUPT6HQ7KZ85 1726 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-212ENST00000467750 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.86e-13■■■■■ 43.1
GAPVD1-212ENST00000467750 TCOF1Q13428 1488 aaKnown RBP10.08□□□□□ -0.8
GAPVD1-212ENST00000467750 MIER1Q8N108 512 aa10.06□□□□□ -0.8
GAPVD1-212ENST00000467750 YTHDC1Q96MU7 727 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-212ENST00000467750 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
GAPVD1-212ENST00000467750 NAIPQ13075 1403 aa10.06□□□□□ -0.8
GAPVD1-212ENST00000467750 PTPN23Q9H3S7 1636 aa10.05□□□□□ -0.8
GAPVD1-212ENST00000467750 RAPGEF6Q8TEU7 1601 aa10.04□□□□□ -0.8
GAPVD1-212ENST00000467750 ACIN1Q9UKV3 1341 aaKnown RBP10.04□□□□□ -0.8
GAPVD1-212ENST00000467750 ERCC6L2Q5T890 1561 aa10.04□□□□□ -0.8
GAPVD1-212ENST00000467750 MIA2Q96PC5 1412 aa10.04□□□□□ -0.8
GAPVD1-212ENST00000467750 TIMELESSQ9UNS1 1208 aa10.04□□□□□ -0.8
GAPVD1-212ENST00000467750 CHD1O14646 1710 aa10.03□□□□□ -0.8
GAPVD1-212ENST00000467750 TSPY4P0CV99 314 aa10.03□□□□□ -0.8
GAPVD1-212ENST00000467750 TSPY10P0CW01 314 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms