RNA–Protein interactions for RNA: ENST00000467750.5

GAPVD1-212, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-212ENST00000467750 NISCHQ9Y2I1 1504 aa14.94□□□□□ -0.02
GAPVD1-212ENST00000467750 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
GAPVD1-212ENST00000467750 SHROOM4Q9ULL8 1493 aa12.86□□□□□ -0.35
GAPVD1-212ENST00000467750 CCDC180Q9P1Z9 1646 aa12.78□□□□□ -0.36
GAPVD1-212ENST00000467750 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-212ENST00000467750 SUPT5HO00267 1087 aaKnown RBP12.48□□□□□ -0.41
GAPVD1-212ENST00000467750 ABCC9O60706 1549 aa12.46□□□□□ -0.42
GAPVD1-212ENST00000467750 DCAF1Q9Y4B6 1507 aa12.33□□□□□ -0.44
GAPVD1-212ENST00000467750 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
GAPVD1-212ENST00000467750 MYO15BQ96JP2 1530 aa12.07□□□□□ -0.48
GAPVD1-212ENST00000467750 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
GAPVD1-212ENST00000467750 NACADO15069 1562 aa11.91□□□□□ -0.5
GAPVD1-212ENST00000467750 RB1CC1Q8TDY2 1594 aa11.85□□□□□ -0.51
GAPVD1-212ENST00000467750 CHIC1Q5VXU3 224 aa11.79□□□□□ -0.52
GAPVD1-212ENST00000467750 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
GAPVD1-212ENST00000467750 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
GAPVD1-212ENST00000467750 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
GAPVD1-212ENST00000467750 MROH2BQ7Z745 1585 aa11.64□□□□□ -0.55
GAPVD1-212ENST00000467750 FAM9AQ8IZU1 332 aaPredicted RBP11.61□□□□□ -0.55
GAPVD1-212ENST00000467750 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
GAPVD1-212ENST00000467750 WIZO95785 1651 aa11.54□□□□□ -0.56
GAPVD1-212ENST00000467750 LOC105371045A0A1W2PR82 267 aa11.53□□□□□ -0.56
GAPVD1-212ENST00000467750 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
GAPVD1-212ENST00000467750 BAZ1AQ9NRL2 1556 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-212ENST00000467750 BICRAQ9NZM4 1560 aa11.48□□□□□ -0.57
GAPVD1-212ENST00000467750 SMARCA4P51532 1647 aa11.41□□□□□ -0.58
GAPVD1-212ENST00000467750 TOP2AP11388 1531 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-212ENST00000467750 CCDC88BA6NC98 1476 aa11.33□□□□□ -0.6
GAPVD1-212ENST00000467750 EIF4G1Q04637 1599 aaKnown RBP11.32□□□□□ -0.6
GAPVD1-212ENST00000467750 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
GAPVD1-212ENST00000467750 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
GAPVD1-212ENST00000467750 SMARCA2P51531 1590 aa11.26□□□□□ -0.61
GAPVD1-212ENST00000467750 PEG3Q9GZU2 1588 aa11.25□□□□□ -0.61
GAPVD1-212ENST00000467750 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
GAPVD1-212ENST00000467750 RANGAP1P46060 587 aaPredicted RBP11.2□□□□□ -0.62
GAPVD1-212ENST00000467750 PPARGC1BQ86YN6 1023 aaKnown RBP11.19□□□□□ -0.62
GAPVD1-212ENST00000467750 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
GAPVD1-212ENST00000467750 TTBK1Q5TCY1 1321 aaPredicted RBP11.16□□□□□ -0.62
GAPVD1-212ENST00000467750 UBTFP17480 764 aaKnown RBP11.14□□□□□ -0.63
GAPVD1-212ENST00000467750 DNAJC5BQ9UF47 199 aa11.12□□□□□ -0.63
GAPVD1-212ENST00000467750 SOGA1O94964 1423 aa11.1□□□□□ -0.63
GAPVD1-212ENST00000467750 HRCP23327 699 aa11.08□□□□□ -0.64
GAPVD1-212ENST00000467750 WRNQ14191 1432 aaPredicted RBP eCLIP11.08□□□□□ -0.647e-6■■■■■ 39.7
GAPVD1-212ENST00000467750 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
GAPVD1-212ENST00000467750 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
GAPVD1-212ENST00000467750 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
GAPVD1-212ENST00000467750 CC2D2AQ9P2K1 1620 aa11.04□□□□□ -0.64
GAPVD1-212ENST00000467750 TRIM26Q12899 539 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-212ENST00000467750 EEA1Q15075 1411 aa10.98□□□□□ -0.65
GAPVD1-212ENST00000467750 HMGXB3Q12766 1538 aa10.98□□□□□ -0.65
GAPVD1-212ENST00000467750 SYNJ1O43426 1573 aa10.96□□□□□ -0.66
GAPVD1-212ENST00000467750 CADPSQ9ULU8 1353 aa10.94□□□□□ -0.66
GAPVD1-212ENST00000467750 NESP48681 1621 aa10.93□□□□□ -0.66
GAPVD1-212ENST00000467750 TNIKQ9UKE5 1360 aa10.91□□□□□ -0.66
GAPVD1-212ENST00000467750 CFTRP13569 1480 aa10.89□□□□□ -0.67
GAPVD1-212ENST00000467750 CEP162Q5TB80 1403 aa10.87□□□□□ -0.67
GAPVD1-212ENST00000467750 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
GAPVD1-212ENST00000467750 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
GAPVD1-212ENST00000467750 CUX1P39880 1505 aa10.83□□□□□ -0.68
GAPVD1-212ENST00000467750 FANCD2Q9BXW9 1451 aa10.83□□□□□ -0.68
GAPVD1-212ENST00000467750 BIVM-ERCC5R4GMW8 1640 aa10.82□□□□□ -0.68
GAPVD1-212ENST00000467750 CEP164Q9UPV0 1460 aa10.82□□□□□ -0.68
GAPVD1-212ENST00000467750 KIF21BO75037 1637 aa10.82□□□□□ -0.68
GAPVD1-212ENST00000467750 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
GAPVD1-212ENST00000467750 RAPGEF2Q9Y4G8 1499 aa10.8□□□□□ -0.68
GAPVD1-212ENST00000467750 APLP2Q06481 763 aa10.8□□□□□ -0.68
GAPVD1-212ENST00000467750 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
GAPVD1-212ENST00000467750 CUX2O14529 1486 aa10.8□□□□□ -0.68
GAPVD1-212ENST00000467750 KIF27Q86VH2 1401 aa10.78□□□□□ -0.68
GAPVD1-212ENST00000467750 RAD54L2Q9Y4B4 1467 aa10.77□□□□□ -0.69
GAPVD1-212ENST00000467750 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
GAPVD1-212ENST00000467750 CLIP1P30622 1438 aa10.75□□□□□ -0.69
GAPVD1-212ENST00000467750 TDRD9Q8NDG6 1382 aaKnown RBP10.74□□□□□ -0.69
GAPVD1-212ENST00000467750 PRXQ9BXM0 1461 aa10.74□□□□□ -0.69
GAPVD1-212ENST00000467750 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
GAPVD1-212ENST00000467750 ZEB1P37275 1124 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-212ENST00000467750 IGF1RP08069 1367 aa10.69□□□□□ -0.7
GAPVD1-212ENST00000467750 HNRNPUL2Q1KMD3 747 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-212ENST00000467750 ERICH3Q5RHP9 1530 aa10.69□□□□□ -0.7
GAPVD1-212ENST00000467750 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
GAPVD1-212ENST00000467750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.69□□□□□ -0.7
GAPVD1-212ENST00000467750 PRDM2Q13029 1718 aa10.68□□□□□ -0.7
GAPVD1-212ENST00000467750 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
GAPVD1-212ENST00000467750 FBLN2P98095 1184 aa10.67□□□□□ -0.7
GAPVD1-212ENST00000467750 VPS8Q8N3P4 1428 aa10.66□□□□□ -0.7
GAPVD1-212ENST00000467750 POLA1P09884 1462 aaPredicted RBP10.66□□□□□ -0.7
GAPVD1-212ENST00000467750 ERCC6Q03468 1493 aa10.65□□□□□ -0.7
GAPVD1-212ENST00000467750 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
GAPVD1-212ENST00000467750 ITGAEP38570 1179 aa10.64□□□□□ -0.71
GAPVD1-212ENST00000467750 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
GAPVD1-212ENST00000467750 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
GAPVD1-212ENST00000467750 LAMC3Q9Y6N6 1575 aa10.62□□□□□ -0.71
GAPVD1-212ENST00000467750 DNMBPQ6XZF7 1577 aa10.6□□□□□ -0.71
GAPVD1-212ENST00000467750 AQRO60306 1485 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■■■□ 19.9
GAPVD1-212ENST00000467750 ARAP1Q96P48 1450 aa10.59□□□□□ -0.71
GAPVD1-212ENST00000467750 KANK4Q5T7N3 995 aaPredicted RBP10.59□□□□□ -0.71
GAPVD1-212ENST00000467750 KIF21AQ7Z4S6 1674 aa10.57□□□□□ -0.72
GAPVD1-212ENST00000467750 GAPVD1Q14C86 1478 aa10.55□□□□□ -0.72
GAPVD1-212ENST00000467750 ABCA10Q8WWZ4 1543 aa10.53□□□□□ -0.72
GAPVD1-212ENST00000467750 ARHGAP35Q9NRY4 1499 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms