RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 SHROOM2Q13796 1616 aa16.55■□□□□ 0.24
ZC3HC1-204ENST00000467642 KIAA0586Q9BVV6 1533 aa16.55■□□□□ 0.24
ZC3HC1-204ENST00000467642 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
ZC3HC1-204ENST00000467642 ERCC6L2Q5T890 1561 aa16.54■□□□□ 0.24
ZC3HC1-204ENST00000467642 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
ZC3HC1-204ENST00000467642 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
ZC3HC1-204ENST00000467642 FAM9AQ8IZU1 332 aaPredicted RBP16.48■□□□□ 0.23
ZC3HC1-204ENST00000467642 EEA1Q15075 1411 aa16.46■□□□□ 0.23
ZC3HC1-204ENST00000467642 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
ZC3HC1-204ENST00000467642 IQGAP2Q13576 1575 aa16.44■□□□□ 0.22
ZC3HC1-204ENST00000467642 CARMIL2Q6F5E8 1435 aa16.4■□□□□ 0.22
ZC3HC1-204ENST00000467642 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
ZC3HC1-204ENST00000467642 TRHP20396 242 aaPredicted RBP16.38■□□□□ 0.21
ZC3HC1-204ENST00000467642 CTTNBP2Q8WZ74 1663 aa16.36■□□□□ 0.21
ZC3HC1-204ENST00000467642 PTPRGP23470 1445 aa16.34■□□□□ 0.21
ZC3HC1-204ENST00000467642 TNIKQ9UKE5 1360 aa16.34■□□□□ 0.21
ZC3HC1-204ENST00000467642 UGGT2Q9NYU1 1516 aa16.34■□□□□ 0.21
ZC3HC1-204ENST00000467642 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
ZC3HC1-204ENST00000467642 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
ZC3HC1-204ENST00000467642 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
ZC3HC1-204ENST00000467642 GOLGA3Q08378 1498 aa16.27■□□□□ 0.2
ZC3HC1-204ENST00000467642 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
ZC3HC1-204ENST00000467642 KIF21BO75037 1637 aa16.27■□□□□ 0.19
ZC3HC1-204ENST00000467642 RANGAP1P46060 587 aaPredicted RBP16.25■□□□□ 0.19
ZC3HC1-204ENST00000467642 ADCY10Q96PN6 1610 aa16.25■□□□□ 0.19
ZC3HC1-204ENST00000467642 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
ZC3HC1-204ENST00000467642 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
ZC3HC1-204ENST00000467642 UACAQ9BZF9 1416 aa16.21■□□□□ 0.19
ZC3HC1-204ENST00000467642 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
ZC3HC1-204ENST00000467642 UHRF1BP1LA0JNW5 1464 aa16.17■□□□□ 0.18
ZC3HC1-204ENST00000467642 MAPKBP1O60336 1514 aa16.15■□□□□ 0.18
ZC3HC1-204ENST00000467642 PLB1Q6P1J6 1458 aa16.15■□□□□ 0.18
ZC3HC1-204ENST00000467642 SAMD9Q5K651 1589 aa16.14■□□□□ 0.17
ZC3HC1-204ENST00000467642 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
ZC3HC1-204ENST00000467642 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
ZC3HC1-204ENST00000467642 KDM5BQ9UGL1 1544 aa16.1■□□□□ 0.17
ZC3HC1-204ENST00000467642 ABCA8O94911 1581 aa16.09■□□□□ 0.17
ZC3HC1-204ENST00000467642 FHOD3Q2V2M9 1422 aa16.09■□□□□ 0.17
ZC3HC1-204ENST00000467642 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.17
ZC3HC1-204ENST00000467642 ASXL2Q76L83 1435 aa16.08■□□□□ 0.17
ZC3HC1-204ENST00000467642 EFCAB5A4FU69 1503 aa16.08■□□□□ 0.16
ZC3HC1-204ENST00000467642 ZCCHC11Q5TAX3 1644 aaKnown RBP16.07■□□□□ 0.16
ZC3HC1-204ENST00000467642 ARID3CA6NKF2 412 aa16.07■□□□□ 0.16
ZC3HC1-204ENST00000467642 DIP2BQ9P265 1576 aa16.05■□□□□ 0.16
ZC3HC1-204ENST00000467642 RAPGEF6Q8TEU7 1601 aa16.02■□□□□ 0.15
ZC3HC1-204ENST00000467642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.15
ZC3HC1-204ENST00000467642 HNRNPUL2Q1KMD3 747 aaKnown RBP16.02■□□□□ 0.15
ZC3HC1-204ENST00000467642 ARHGAP35Q9NRY4 1499 aa16.01■□□□□ 0.15
ZC3HC1-204ENST00000467642 ATP10BO94823 1461 aa16■□□□□ 0.15
ZC3HC1-204ENST00000467642 KCNH8Q96L42 1107 aa16■□□□□ 0.15
ZC3HC1-204ENST00000467642 WDR7Q9Y4E6 1490 aa15.99■□□□□ 0.15
ZC3HC1-204ENST00000467642 EPRSP07814 1512 aaKnown RBP15.98■□□□□ 0.15
ZC3HC1-204ENST00000467642 ATP1B4Q9UN42 357 aaPredicted RBP15.98■□□□□ 0.15
ZC3HC1-204ENST00000467642 TSPOAP1O95153 1857 aa15.97■□□□□ 0.15
ZC3HC1-204ENST00000467642 NUP153P49790 1475 aaKnown RBP15.96■□□□□ 0.15
ZC3HC1-204ENST00000467642 FMN1Q68DA7 1419 aa15.96■□□□□ 0.15
ZC3HC1-204ENST00000467642 GLI2P10070 1586 aa15.96■□□□□ 0.14
ZC3HC1-204ENST00000467642 CLIP1P30622 1438 aa15.92■□□□□ 0.14
ZC3HC1-204ENST00000467642 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
ZC3HC1-204ENST00000467642 PLEKHD1A6NEE1 506 aa15.91■□□□□ 0.14
ZC3HC1-204ENST00000467642 MAP3K4Q9Y6R4 1608 aa15.89■□□□□ 0.13
ZC3HC1-204ENST00000467642 CD109Q6YHK3 1445 aa15.88■□□□□ 0.13
ZC3HC1-204ENST00000467642 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
ZC3HC1-204ENST00000467642 CDK13Q14004 1512 aaKnown RBP15.85■□□□□ 0.13
ZC3HC1-204ENST00000467642 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
ZC3HC1-204ENST00000467642 HRCP23327 699 aa15.85■□□□□ 0.13
ZC3HC1-204ENST00000467642 TEX14Q8IWB6 1497 aa15.85■□□□□ 0.13
ZC3HC1-204ENST00000467642 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
ZC3HC1-204ENST00000467642 CDK11AQ9UQ88 783 aaPredicted RBP15.84■□□□□ 0.13
ZC3HC1-204ENST00000467642 CEP162Q5TB80 1403 aa15.83■□□□□ 0.13
ZC3HC1-204ENST00000467642 KDM6BO15054 1643 aa15.83■□□□□ 0.13
ZC3HC1-204ENST00000467642 CASKIN1Q8WXD9 1431 aa15.82■□□□□ 0.12
ZC3HC1-204ENST00000467642 MAGI3Q5TCQ9 1506 aa15.8■□□□□ 0.12
ZC3HC1-204ENST00000467642 ABCA9Q8IUA7 1624 aa15.8■□□□□ 0.12
ZC3HC1-204ENST00000467642 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
ZC3HC1-204ENST00000467642 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.12
ZC3HC1-204ENST00000467642 LRRIQ1Q96JM4 1722 aa15.76■□□□□ 0.11
ZC3HC1-204ENST00000467642 CCDC18Q5T9S5 1454 aa15.76■□□□□ 0.11
ZC3HC1-204ENST00000467642 COL17A1Q9UMD9 1497 aaPredicted RBP15.74■□□□□ 0.11
ZC3HC1-204ENST00000467642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.74■□□□□ 0.11
ZC3HC1-204ENST00000467642 TROQ12816 1431 aaPredicted RBP15.73■□□□□ 0.11
ZC3HC1-204ENST00000467642 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
ZC3HC1-204ENST00000467642 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
ZC3HC1-204ENST00000467642 KIF14Q15058 1648 aa15.69■□□□□ 0.1
ZC3HC1-204ENST00000467642 NEO1Q92859 1461 aa15.69■□□□□ 0.1
ZC3HC1-204ENST00000467642 FANCAO15360 1455 aa15.68■□□□□ 0.1
ZC3HC1-204ENST00000467642 ARAP3Q8WWN8 1544 aa15.67■□□□□ 0.1
ZC3HC1-204ENST00000467642 PLCH2O75038 1416 aa15.66■□□□□ 0.1
ZC3HC1-204ENST00000467642 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
ZC3HC1-204ENST00000467642 AKNAQ7Z591 1439 aa15.65■□□□□ 0.1
ZC3HC1-204ENST00000467642 VPS8Q8N3P4 1428 aa15.64■□□□□ 0.09
ZC3HC1-204ENST00000467642 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
ZC3HC1-204ENST00000467642 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
ZC3HC1-204ENST00000467642 CFAP74Q9C0B2 1584 aa15.64■□□□□ 0.09
ZC3HC1-204ENST00000467642 MYO5CQ9NQX4 1742 aa15.63■□□□□ 0.09
ZC3HC1-204ENST00000467642 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
ZC3HC1-204ENST00000467642 DENND4BO75064 1496 aaPredicted RBP15.6■□□□□ 0.09
ZC3HC1-204ENST00000467642 AEBP2Q6ZN18 517 aaPredicted RBP15.58■□□□□ 0.09
ZC3HC1-204ENST00000467642 ADGRL1O94910 1474 aa15.58■□□□□ 0.09
ZC3HC1-204ENST00000467642 SCAPERQ9BY12 1400 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms