RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
ZC3HC1-204ENST00000467642 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
ZC3HC1-204ENST00000467642 ABCC9O60706 1549 aa20.85■□□□□ 0.93
ZC3HC1-204ENST00000467642 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
ZC3HC1-204ENST00000467642 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
ZC3HC1-204ENST00000467642 NACADO15069 1562 aa19.97■□□□□ 0.79
ZC3HC1-204ENST00000467642 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
ZC3HC1-204ENST00000467642 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
ZC3HC1-204ENST00000467642 DCAF1Q9Y4B6 1507 aa19.72■□□□□ 0.75
ZC3HC1-204ENST00000467642 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
ZC3HC1-204ENST00000467642 PABPN1Q86U42 306 aaKnown RBP eCLIP19.52■□□□□ 0.72
ZC3HC1-204ENST00000467642 SCRIBQ14160 1630 aa19.39■□□□□ 0.7
ZC3HC1-204ENST00000467642 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
ZC3HC1-204ENST00000467642 DNAJC5BQ9UF47 199 aa19.17■□□□□ 0.66
ZC3HC1-204ENST00000467642 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
ZC3HC1-204ENST00000467642 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
ZC3HC1-204ENST00000467642 CC2D2AQ9P2K1 1620 aa18.83■□□□□ 0.61
ZC3HC1-204ENST00000467642 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
ZC3HC1-204ENST00000467642 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
ZC3HC1-204ENST00000467642 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
ZC3HC1-204ENST00000467642 ATAD2BQ9ULI0 1458 aa18.45■□□□□ 0.54
ZC3HC1-204ENST00000467642 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
ZC3HC1-204ENST00000467642 SMARCA2P51531 1590 aa18.42■□□□□ 0.54
ZC3HC1-204ENST00000467642 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
ZC3HC1-204ENST00000467642 PEG3Q9GZU2 1588 aa18.32■□□□□ 0.52
ZC3HC1-204ENST00000467642 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
ZC3HC1-204ENST00000467642 BAZ1BQ9UIG0 1483 aaKnown RBP18.31■□□□□ 0.52
ZC3HC1-204ENST00000467642 WIZO95785 1651 aa18.22■□□□□ 0.51
ZC3HC1-204ENST00000467642 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
ZC3HC1-204ENST00000467642 NESP48681 1621 aa18.02■□□□□ 0.48
ZC3HC1-204ENST00000467642 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
ZC3HC1-204ENST00000467642 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
ZC3HC1-204ENST00000467642 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
ZC3HC1-204ENST00000467642 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
ZC3HC1-204ENST00000467642 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
ZC3HC1-204ENST00000467642 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
ZC3HC1-204ENST00000467642 SUPT5HO00267 1087 aaKnown RBP17.81■□□□□ 0.44
ZC3HC1-204ENST00000467642 CFTRP13569 1480 aa17.79■□□□□ 0.44
ZC3HC1-204ENST00000467642 KIF21AQ7Z4S6 1674 aa17.79■□□□□ 0.44
ZC3HC1-204ENST00000467642 CUX2O14529 1486 aa17.76■□□□□ 0.43
ZC3HC1-204ENST00000467642 THOC2Q8NI27 1593 aaKnown RBP17.71■□□□□ 0.43
ZC3HC1-204ENST00000467642 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
ZC3HC1-204ENST00000467642 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
ZC3HC1-204ENST00000467642 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
ZC3HC1-204ENST00000467642 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
ZC3HC1-204ENST00000467642 WDR62O43379 1518 aa17.58■□□□□ 0.41
ZC3HC1-204ENST00000467642 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.39
ZC3HC1-204ENST00000467642 ABCC8Q09428 1581 aa17.42■□□□□ 0.38
ZC3HC1-204ENST00000467642 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
ZC3HC1-204ENST00000467642 DNMBPQ6XZF7 1577 aa17.38■□□□□ 0.37
ZC3HC1-204ENST00000467642 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
ZC3HC1-204ENST00000467642 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
ZC3HC1-204ENST00000467642 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.35
ZC3HC1-204ENST00000467642 CUX1P39880 1505 aa17.26■□□□□ 0.35
ZC3HC1-204ENST00000467642 ZNF608Q9ULD9 1512 aaPredicted RBP17.24■□□□□ 0.35
ZC3HC1-204ENST00000467642 SOGA1O94964 1423 aa17.23■□□□□ 0.35
ZC3HC1-204ENST00000467642 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
ZC3HC1-204ENST00000467642 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
ZC3HC1-204ENST00000467642 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
ZC3HC1-204ENST00000467642 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.343e-6■■■□□ 16.9
ZC3HC1-204ENST00000467642 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
ZC3HC1-204ENST00000467642 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
ZC3HC1-204ENST00000467642 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
ZC3HC1-204ENST00000467642 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
ZC3HC1-204ENST00000467642 SYNJ1O43426 1573 aa17.1■□□□□ 0.33
ZC3HC1-204ENST00000467642 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
ZC3HC1-204ENST00000467642 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
ZC3HC1-204ENST00000467642 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
ZC3HC1-204ENST00000467642 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
ZC3HC1-204ENST00000467642 FBLN2P98095 1184 aa17.04■□□□□ 0.32
ZC3HC1-204ENST00000467642 GAPVD1Q14C86 1478 aa17.01■□□□□ 0.31
ZC3HC1-204ENST00000467642 GRIN2BQ13224 1484 aa17■□□□□ 0.31
ZC3HC1-204ENST00000467642 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
ZC3HC1-204ENST00000467642 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
ZC3HC1-204ENST00000467642 CHMP7Q8WUX9 453 aaPredicted RBP16.96■□□□□ 0.3
ZC3HC1-204ENST00000467642 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
ZC3HC1-204ENST00000467642 CHD1O14646 1710 aa16.95■□□□□ 0.3
ZC3HC1-204ENST00000467642 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
ZC3HC1-204ENST00000467642 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
ZC3HC1-204ENST00000467642 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
ZC3HC1-204ENST00000467642 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
ZC3HC1-204ENST00000467642 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
ZC3HC1-204ENST00000467642 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
ZC3HC1-204ENST00000467642 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
ZC3HC1-204ENST00000467642 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
ZC3HC1-204ENST00000467642 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
ZC3HC1-204ENST00000467642 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
ZC3HC1-204ENST00000467642 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
ZC3HC1-204ENST00000467642 IGF1RP08069 1367 aa16.75■□□□□ 0.27
ZC3HC1-204ENST00000467642 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
ZC3HC1-204ENST00000467642 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
ZC3HC1-204ENST00000467642 NUP160Q12769 1436 aa16.69■□□□□ 0.26
ZC3HC1-204ENST00000467642 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
ZC3HC1-204ENST00000467642 CYB5RLQ6IPT4 315 aa16.68■□□□□ 0.26
ZC3HC1-204ENST00000467642 CUL7Q14999 1698 aa16.67■□□□□ 0.26
ZC3HC1-204ENST00000467642 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
ZC3HC1-204ENST00000467642 RUSC2Q8N2Y8 1516 aa16.65■□□□□ 0.26
ZC3HC1-204ENST00000467642 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
ZC3HC1-204ENST00000467642 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
ZC3HC1-204ENST00000467642 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms