RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 ARID3CA6NKF2 412 aa7.98□□□□□ -1.13
KPNA1-204ENST00000466923 EEA1Q15075 1411 aa7.98□□□□□ -1.13
KPNA1-204ENST00000466923 CYB5RLQ6IPT4 315 aa7.98□□□□□ -1.13
KPNA1-204ENST00000466923 PRXQ9BXM0 1461 aa7.98□□□□□ -1.13
KPNA1-204ENST00000466923 ATP1B4Q9UN42 357 aaPredicted RBP7.97□□□□□ -1.13
KPNA1-204ENST00000466923 CHD1O14646 1710 aa7.96□□□□□ -1.13
KPNA1-204ENST00000466923 ADAMTS12P58397 1594 aa7.96□□□□□ -1.13
KPNA1-204ENST00000466923 DNAJC5Q9H3Z4 198 aa7.96□□□□□ -1.14
KPNA1-204ENST00000466923 CEP170Q5SW79 1584 aa7.93□□□□□ -1.14
KPNA1-204ENST00000466923 GOLGA3Q08378 1498 aa7.92□□□□□ -1.14
KPNA1-204ENST00000466923 CUL7Q14999 1698 aa7.92□□□□□ -1.14
KPNA1-204ENST00000466923 PRG4Q92954 1404 aaPredicted RBP7.92□□□□□ -1.14
KPNA1-204ENST00000466923 NUP160Q12769 1436 aa7.91□□□□□ -1.14
KPNA1-204ENST00000466923 RTN4Q9NQC3 1192 aaKnown RBP7.9□□□□□ -1.14
KPNA1-204ENST00000466923 KIAA0586Q9BVV6 1533 aa7.9□□□□□ -1.15
KPNA1-204ENST00000466923 ERCC6L2Q5T890 1561 aa7.89□□□□□ -1.15
KPNA1-204ENST00000466923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.89□□□□□ -1.15
KPNA1-204ENST00000466923 HNRNPUL2Q1KMD3 747 aaKnown RBP7.89□□□□□ -1.15
KPNA1-204ENST00000466923 PPARGC1BQ86YN6 1023 aaKnown RBP7.89□□□□□ -1.15
KPNA1-204ENST00000466923 TNIKQ9UKE5 1360 aa7.87□□□□□ -1.15
KPNA1-204ENST00000466923 FHOD3Q2V2M9 1422 aa7.87□□□□□ -1.15
KPNA1-204ENST00000466923 KIF21BO75037 1637 aa7.86□□□□□ -1.15
KPNA1-204ENST00000466923 IQGAP2Q13576 1575 aa7.86□□□□□ -1.15
KPNA1-204ENST00000466923 CLIP1P30622 1438 aa7.85□□□□□ -1.15
KPNA1-204ENST00000466923 CEP162Q5TB80 1403 aa7.85□□□□□ -1.15
KPNA1-204ENST00000466923 ARHGEF11O15085 1522 aa7.85□□□□□ -1.15
KPNA1-204ENST00000466923 PTPRGP23470 1445 aa7.85□□□□□ -1.15
KPNA1-204ENST00000466923 CARMIL2Q6F5E8 1435 aa7.84□□□□□ -1.15
KPNA1-204ENST00000466923 CLASP1Q7Z460 1538 aa7.84□□□□□ -1.15
KPNA1-204ENST00000466923 DISP1Q96F81 1524 aa7.83□□□□□ -1.16
KPNA1-204ENST00000466923 ARHGAP35Q9NRY4 1499 aa7.82□□□□□ -1.16
KPNA1-204ENST00000466923 KCNH8Q96L42 1107 aa7.81□□□□□ -1.16
KPNA1-204ENST00000466923 NPM1P06748 294 aaKnown RBP eCLIP7.81□□□□□ -1.16
KPNA1-204ENST00000466923 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
KPNA1-204ENST00000466923 ARAP1Q96P48 1450 aa7.8□□□□□ -1.16
KPNA1-204ENST00000466923 RIMBP3CA6NJZ7 1639 aa7.8□□□□□ -1.16
KPNA1-204ENST00000466923 RIMBP3BA6NNM3 1639 aa7.8□□□□□ -1.16
KPNA1-204ENST00000466923 RIMBP3Q9UFD9 1639 aa7.8□□□□□ -1.16
KPNA1-204ENST00000466923 CTTNBP2Q8WZ74 1663 aa7.8□□□□□ -1.16
KPNA1-204ENST00000466923 TRHP20396 242 aaPredicted RBP7.8□□□□□ -1.16
KPNA1-204ENST00000466923 UGGT2Q9NYU1 1516 aa7.78□□□□□ -1.16
KPNA1-204ENST00000466923 APLP2Q06481 763 aa7.77□□□□□ -1.17
KPNA1-204ENST00000466923 KIAA0556O60303 1618 aa7.76□□□□□ -1.17
KPNA1-204ENST00000466923 KCNA4P22459 653 aa7.76□□□□□ -1.17
KPNA1-204ENST00000466923 SHROOM2Q13796 1616 aa7.76□□□□□ -1.17
KPNA1-204ENST00000466923 UACAQ9BZF9 1416 aa7.75□□□□□ -1.17
KPNA1-204ENST00000466923 KANK4Q5T7N3 995 aaPredicted RBP7.74□□□□□ -1.17
KPNA1-204ENST00000466923 PLEKHD1A6NEE1 506 aa7.73□□□□□ -1.17
KPNA1-204ENST00000466923 FMN1Q68DA7 1419 aa7.73□□□□□ -1.17
KPNA1-204ENST00000466923 FAM69CQ0P6D2 419 aa7.72□□□□□ -1.17
KPNA1-204ENST00000466923 SAMD9Q5K651 1589 aa7.72□□□□□ -1.17
KPNA1-204ENST00000466923 EFCAB5A4FU69 1503 aa7.71□□□□□ -1.18
KPNA1-204ENST00000466923 CDK13Q14004 1512 aaKnown RBP7.71□□□□□ -1.18
KPNA1-204ENST00000466923 ATP10BO94823 1461 aa7.7□□□□□ -1.18
KPNA1-204ENST00000466923 VPS8Q8N3P4 1428 aa7.7□□□□□ -1.18
KPNA1-204ENST00000466923 NUP153P49790 1475 aaKnown RBP7.7□□□□□ -1.18
KPNA1-204ENST00000466923 ZNF777Q9ULD5 760 aaPredicted RBP7.69□□□□□ -1.18
KPNA1-204ENST00000466923 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
KPNA1-204ENST00000466923 ADCY10Q96PN6 1610 aa7.68□□□□□ -1.18
KPNA1-204ENST00000466923 MTUS2Q5JR59 1369 aa7.67□□□□□ -1.18
KPNA1-204ENST00000466923 CASKIN1Q8WXD9 1431 aa7.67□□□□□ -1.18
KPNA1-204ENST00000466923 PCF11O94913 1555 aaKnown RBP7.67□□□□□ -1.18
KPNA1-204ENST00000466923 EPRSP07814 1512 aaKnown RBP7.67□□□□□ -1.18
KPNA1-204ENST00000466923 ABCC2Q92887 1545 aa7.67□□□□□ -1.18
KPNA1-204ENST00000466923 ASXL2Q76L83 1435 aa7.67□□□□□ -1.18
KPNA1-204ENST00000466923 RAPGEF6Q8TEU7 1601 aa7.66□□□□□ -1.18
KPNA1-204ENST00000466923 ABCA8O94911 1581 aa7.66□□□□□ -1.18
KPNA1-204ENST00000466923 ITGAEP38570 1179 aa7.65□□□□□ -1.18
KPNA1-204ENST00000466923 KDM5BQ9UGL1 1544 aa7.64□□□□□ -1.19
KPNA1-204ENST00000466923 AMER1Q5JTC6 1135 aaPredicted RBP7.63□□□□□ -1.19
KPNA1-204ENST00000466923 ZNF644Q9H582 1327 aaPredicted RBP7.63□□□□□ -1.19
KPNA1-204ENST00000466923 UHRF1BP1LA0JNW5 1464 aa7.62□□□□□ -1.19
KPNA1-204ENST00000466923 FYCO1Q9BQS8 1478 aa7.62□□□□□ -1.19
KPNA1-204ENST00000466923 ZCCHC11Q5TAX3 1644 aaKnown RBP7.62□□□□□ -1.19
KPNA1-204ENST00000466923 FAM50AQ14320 339 aaKnown RBP7.62□□□□□ -1.19
KPNA1-204ENST00000466923 MAGI3Q5TCQ9 1506 aa7.61□□□□□ -1.19
KPNA1-204ENST00000466923 MYT1LQ9UL68 1186 aa7.61□□□□□ -1.19
KPNA1-204ENST00000466923 HECW1Q76N89 1606 aa7.61□□□□□ -1.19
KPNA1-204ENST00000466923 CFDP1Q9UEE9 299 aaPredicted RBP7.61□□□□□ -1.19
KPNA1-204ENST00000466923 LRRIQ1Q96JM4 1722 aa7.6□□□□□ -1.19
KPNA1-204ENST00000466923 WDR7Q9Y4E6 1490 aa7.6□□□□□ -1.19
KPNA1-204ENST00000466923 RAPGEF3O95398 923 aa7.6□□□□□ -1.19
KPNA1-204ENST00000466923 HNRNPMP52272 730 aaKnown RBP eCLIP7.59□□□□□ -1.19
KPNA1-204ENST00000466923 TROQ12816 1431 aaPredicted RBP7.59□□□□□ -1.19
KPNA1-204ENST00000466923 CD109Q6YHK3 1445 aa7.59□□□□□ -1.2
KPNA1-204ENST00000466923 LRRC9Q6ZRR7 1453 aa7.58□□□□□ -1.2
KPNA1-204ENST00000466923 MAP3K1Q13233 1512 aa7.58□□□□□ -1.2
KPNA1-204ENST00000466923 CCNB3Q8WWL7 1395 aa7.58□□□□□ -1.2
KPNA1-204ENST00000466923 TSPOAP1O95153 1857 aa7.58□□□□□ -1.2
KPNA1-204ENST00000466923 CCDC18Q5T9S5 1454 aa7.58□□□□□ -1.2
KPNA1-204ENST00000466923 CHIC2Q9UKJ5 165 aa7.58□□□□□ -1.2
KPNA1-204ENST00000466923 PHLDB1Q86UU1 1377 aa7.57□□□□□ -1.2
KPNA1-204ENST00000466923 AFAP1Q8N556 730 aa7.57□□□□□ -1.2
KPNA1-204ENST00000466923 TIAM1Q13009 1591 aa7.57□□□□□ -1.2
KPNA1-204ENST00000466923 ABCC10Q5T3U5 1492 aa7.57□□□□□ -1.2
KPNA1-204ENST00000466923 KIF14Q15058 1648 aa7.57□□□□□ -1.2
KPNA1-204ENST00000466923 EFCAB2Q5VUJ9 269 aa7.56□□□□□ -1.2
KPNA1-204ENST00000466923 NCOA2Q15596 1464 aa7.56□□□□□ -1.2
KPNA1-204ENST00000466923 MAPKBP1O60336 1514 aa7.55□□□□□ -1.2
KPNA1-204ENST00000466923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms