RNA–Protein interactions for RNA: ENST00000466923.5

KPNA1-204, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,316 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-204ENST00000466923 NISCHQ9Y2I1 1504 aa11.44□□□□□ -0.58
KPNA1-204ENST00000466923 CCDC180Q9P1Z9 1646 aa10.06□□□□□ -0.8
KPNA1-204ENST00000466923 ABCC9O60706 1549 aa9.91□□□□□ -0.82
KPNA1-204ENST00000466923 DCAF8L2P0C7V8 631 aa9.9□□□□□ -0.82
KPNA1-204ENST00000466923 MYO15BQ96JP2 1530 aa9.55□□□□□ -0.88
KPNA1-204ENST00000466923 ZCCHC6Q5VYS8 1495 aaKnown RBP9.51□□□□□ -0.89
KPNA1-204ENST00000466923 DCAF1Q9Y4B6 1507 aa9.51□□□□□ -0.89
KPNA1-204ENST00000466923 SHROOM4Q9ULL8 1493 aa9.45□□□□□ -0.9
KPNA1-204ENST00000466923 PABPN1Q86U42 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
KPNA1-204ENST00000466923 RB1CC1Q8TDY2 1594 aa9.39□□□□□ -0.91
KPNA1-204ENST00000466923 NACADO15069 1562 aa9.38□□□□□ -0.91
KPNA1-204ENST00000466923 SCRIBQ14160 1630 aa9.31□□□□□ -0.92
KPNA1-204ENST00000466923 UNC13AQ9UPW8 1703 aa9.16□□□□□ -0.94
KPNA1-204ENST00000466923 BICRAQ9NZM4 1560 aa9.13□□□□□ -0.95
KPNA1-204ENST00000466923 DNAJC5BQ9UF47 199 aa9.06□□□□□ -0.96
KPNA1-204ENST00000466923 CECR2Q9BXF3 1484 aa9.01□□□□□ -0.97
KPNA1-204ENST00000466923 SUPT5HO00267 1087 aaKnown RBP9□□□□□ -0.97
KPNA1-204ENST00000466923 EIF4G1Q04637 1599 aaKnown RBP8.9□□□□□ -0.99
KPNA1-204ENST00000466923 CHIC1Q5VXU3 224 aa8.9□□□□□ -0.99
KPNA1-204ENST00000466923 MROH2BQ7Z745 1585 aa8.88□□□□□ -0.99
KPNA1-204ENST00000466923 CC2D2AQ9P2K1 1620 aa8.85□□□□□ -0.99
KPNA1-204ENST00000466923 RSF1Q96T23 1441 aaPredicted RBP8.84□□□□□ -0.99
KPNA1-204ENST00000466923 BAZ1AQ9NRL2 1556 aaPredicted RBP8.82□□□□□ -1
KPNA1-204ENST00000466923 SMARCA4P51532 1647 aa8.81□□□□□ -1
KPNA1-204ENST00000466923 ATAD2BQ9ULI0 1458 aa8.79□□□□□ -1
KPNA1-204ENST00000466923 WIZO95785 1651 aa8.79□□□□□ -1
KPNA1-204ENST00000466923 BAZ1BQ9UIG0 1483 aaKnown RBP8.73□□□□□ -1.01
KPNA1-204ENST00000466923 NCAPD3P42695 1498 aa8.71□□□□□ -1.01
KPNA1-204ENST00000466923 SMARCA2P51531 1590 aa8.7□□□□□ -1.02
KPNA1-204ENST00000466923 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
KPNA1-204ENST00000466923 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
KPNA1-204ENST00000466923 NESP48681 1621 aa8.61□□□□□ -1.03
KPNA1-204ENST00000466923 HMGXB3Q12766 1538 aa8.61□□□□□ -1.03
KPNA1-204ENST00000466923 TOP2AP11388 1531 aaKnown RBP8.6□□□□□ -1.03
KPNA1-204ENST00000466923 CADPSQ9ULU8 1353 aa8.54□□□□□ -1.04
KPNA1-204ENST00000466923 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
KPNA1-204ENST00000466923 ERCC6Q03468 1493 aa8.5□□□□□ -1.05
KPNA1-204ENST00000466923 EHMT2Q96KQ7 1210 aa8.48□□□□□ -1.05
KPNA1-204ENST00000466923 AEBP2Q6ZN18 517 aaPredicted RBP8.47□□□□□ -1.05
KPNA1-204ENST00000466923 CFTRP13569 1480 aa8.47□□□□□ -1.05
KPNA1-204ENST00000466923 PDS5BQ9NTI5 1447 aa8.45□□□□□ -1.06
KPNA1-204ENST00000466923 FANCD2Q9BXW9 1451 aa8.44□□□□□ -1.06
KPNA1-204ENST00000466923 LAMC3Q9Y6N6 1575 aa8.41□□□□□ -1.06
KPNA1-204ENST00000466923 PRDM2Q13029 1718 aa8.41□□□□□ -1.06
KPNA1-204ENST00000466923 TRIM41Q8WV44 630 aa8.39□□□□□ -1.07
KPNA1-204ENST00000466923 ABCC8Q09428 1581 aa8.39□□□□□ -1.07
KPNA1-204ENST00000466923 CEP164Q9UPV0 1460 aa8.39□□□□□ -1.07
KPNA1-204ENST00000466923 KIF21AQ7Z4S6 1674 aa8.38□□□□□ -1.07
KPNA1-204ENST00000466923 FAM9AQ8IZU1 332 aaPredicted RBP8.36□□□□□ -1.07
KPNA1-204ENST00000466923 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.08
KPNA1-204ENST00000466923 WRNQ14191 1432 aaPredicted RBP eCLIP8.33□□□□□ -1.08
KPNA1-204ENST00000466923 MRC2Q9UBG0 1479 aa8.32□□□□□ -1.08
KPNA1-204ENST00000466923 RAD54L2Q9Y4B4 1467 aa8.3□□□□□ -1.08
KPNA1-204ENST00000466923 CUX1P39880 1505 aa8.3□□□□□ -1.08
KPNA1-204ENST00000466923 TOPBP1Q92547 1522 aa8.3□□□□□ -1.08
KPNA1-204ENST00000466923 TDRD9Q8NDG6 1382 aaKnown RBP8.29□□□□□ -1.08
KPNA1-204ENST00000466923 SOGA1O94964 1423 aa8.28□□□□□ -1.08
KPNA1-204ENST00000466923 FBLN2P98095 1184 aa8.28□□□□□ -1.08
KPNA1-204ENST00000466923 SYNJ1O43426 1573 aa8.27□□□□□ -1.09
KPNA1-204ENST00000466923 FGD5Q6ZNL6 1462 aa8.27□□□□□ -1.09
KPNA1-204ENST00000466923 THOC2Q8NI27 1593 aaKnown RBP8.26□□□□□ -1.09
KPNA1-204ENST00000466923 POLA1P09884 1462 aaPredicted RBP8.26□□□□□ -1.09
KPNA1-204ENST00000466923 AQRO60306 1485 aaKnown RBP eCLIP8.25□□□□□ -1.09
KPNA1-204ENST00000466923 CUX2O14529 1486 aa8.24□□□□□ -1.09
KPNA1-204ENST00000466923 ZNF608Q9ULD9 1512 aaPredicted RBP8.24□□□□□ -1.09
KPNA1-204ENST00000466923 WDR62O43379 1518 aa8.23□□□□□ -1.09
KPNA1-204ENST00000466923 DNMBPQ6XZF7 1577 aa8.23□□□□□ -1.09
KPNA1-204ENST00000466923 WDR97A6NE52 1622 aa8.23□□□□□ -1.09
KPNA1-204ENST00000466923 RUSC2Q8N2Y8 1516 aa8.21□□□□□ -1.09
KPNA1-204ENST00000466923 RANGAP1P46060 587 aaPredicted RBP8.2□□□□□ -1.1
KPNA1-204ENST00000466923 TOP2BQ02880 1626 aa8.2□□□□□ -1.1
KPNA1-204ENST00000466923 IFT140Q96RY7 1462 aa8.17□□□□□ -1.1
KPNA1-204ENST00000466923 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
KPNA1-204ENST00000466923 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
KPNA1-204ENST00000466923 CSRNP3Q8WYN3 585 aa8.14□□□□□ -1.11
KPNA1-204ENST00000466923 GAPVD1Q14C86 1478 aa8.14□□□□□ -1.11
KPNA1-204ENST00000466923 BIVM-ERCC5R4GMW8 1640 aa8.14□□□□□ -1.11
KPNA1-204ENST00000466923 TARBP1Q13395 1621 aaKnown RBP8.14□□□□□ -1.11
KPNA1-204ENST00000466923 KIF27Q86VH2 1401 aa8.13□□□□□ -1.11
KPNA1-204ENST00000466923 IGF1RP08069 1367 aa8.13□□□□□ -1.11
KPNA1-204ENST00000466923 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
KPNA1-204ENST00000466923 TTBK1Q5TCY1 1321 aaPredicted RBP8.12□□□□□ -1.11
KPNA1-204ENST00000466923 UBTFP17480 764 aaKnown RBP8.11□□□□□ -1.11
KPNA1-204ENST00000466923 EIF4G3O43432 1585 aaKnown RBP8.1□□□□□ -1.11
KPNA1-204ENST00000466923 SNAPC4Q5SXM2 1469 aa8.09□□□□□ -1.11
KPNA1-204ENST00000466923 CARMIL1Q5VZK9 1371 aa8.09□□□□□ -1.11
KPNA1-204ENST00000466923 GRIN2BQ13224 1484 aa8.08□□□□□ -1.12
KPNA1-204ENST00000466923 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
KPNA1-204ENST00000466923 P3H3Q8IVL6 736 aa8.06□□□□□ -1.12
KPNA1-204ENST00000466923 ABCA5Q8WWZ7 1642 aa8.03□□□□□ -1.12
KPNA1-204ENST00000466923 PHF23Q9BUL5 403 aaPredicted RBP8.03□□□□□ -1.12
KPNA1-204ENST00000466923 RAPGEF2Q9Y4G8 1499 aa8.02□□□□□ -1.12
KPNA1-204ENST00000466923 FHAD1B1AJZ9 1412 aa8.02□□□□□ -1.13
KPNA1-204ENST00000466923 PLPPR3Q6T4P5 718 aa8.01□□□□□ -1.13
KPNA1-204ENST00000466923 SYNJ2O15056 1496 aa8□□□□□ -1.13
KPNA1-204ENST00000466923 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
KPNA1-204ENST00000466923 PBRM1Q86U86 1689 aa8□□□□□ -1.13
KPNA1-204ENST00000466923 JPH4Q96JJ6 628 aa8□□□□□ -1.13
KPNA1-204ENST00000466923 ERICH3Q5RHP9 1530 aa8□□□□□ -1.13
KPNA1-204ENST00000466923 GRIN2AQ12879 1464 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms