RNA–Protein interactions for RNA: ENST00000465559.5

FDPS-205, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-205ENST00000465559 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
FDPS-205ENST00000465559 KIAA0586Q9BVV6 1533 aa26.06■■□□□ 1.76
FDPS-205ENST00000465559 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
FDPS-205ENST00000465559 ARAP1Q96P48 1450 aa25.98■■□□□ 1.75
FDPS-205ENST00000465559 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
FDPS-205ENST00000465559 ERCC6L2Q5T890 1561 aa25.97■■□□□ 1.75
FDPS-205ENST00000465559 IQGAP2Q13576 1575 aa25.91■■□□□ 1.74
FDPS-205ENST00000465559 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
FDPS-205ENST00000465559 PRG4Q92954 1404 aaPredicted RBP25.89■■□□□ 1.74
FDPS-205ENST00000465559 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
FDPS-205ENST00000465559 KIF21BO75037 1637 aa25.87■■□□□ 1.73
FDPS-205ENST00000465559 CYB5RLQ6IPT4 315 aa25.84■■□□□ 1.73
FDPS-205ENST00000465559 UGGT2Q9NYU1 1516 aa25.82■■□□□ 1.72
FDPS-205ENST00000465559 DISP1Q96F81 1524 aa25.76■■□□□ 1.71
FDPS-205ENST00000465559 CARMIL2Q6F5E8 1435 aa25.7■■□□□ 1.7
FDPS-205ENST00000465559 KIAA0556O60303 1618 aa25.68■■□□□ 1.7
FDPS-205ENST00000465559 GOLGA3Q08378 1498 aa25.67■■□□□ 1.7
FDPS-205ENST00000465559 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.69
FDPS-205ENST00000465559 PTPRGP23470 1445 aa25.6■■□□□ 1.69
FDPS-205ENST00000465559 SAMD9Q5K651 1589 aa25.59■■□□□ 1.69
FDPS-205ENST00000465559 ADCY10Q96PN6 1610 aa25.55■■□□□ 1.68
FDPS-205ENST00000465559 UBTFP17480 764 aaKnown RBP25.5■■□□□ 1.67
FDPS-205ENST00000465559 UHRF1BP1LA0JNW5 1464 aa25.48■■□□□ 1.67
FDPS-205ENST00000465559 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
FDPS-205ENST00000465559 EFCAB5A4FU69 1503 aa25.46■■□□□ 1.67
FDPS-205ENST00000465559 UACAQ9BZF9 1416 aa25.46■■□□□ 1.67
FDPS-205ENST00000465559 ABCC2Q92887 1545 aa25.43■■□□□ 1.66
FDPS-205ENST00000465559 ABCA8O94911 1581 aa25.42■■□□□ 1.66
FDPS-205ENST00000465559 TTBK1Q5TCY1 1321 aaPredicted RBP25.4■■□□□ 1.66
FDPS-205ENST00000465559 P3H3Q8IVL6 736 aa25.39■■□□□ 1.66
FDPS-205ENST00000465559 PLB1Q6P1J6 1458 aa25.39■■□□□ 1.65
FDPS-205ENST00000465559 ARHGAP35Q9NRY4 1499 aa25.37■■□□□ 1.65
FDPS-205ENST00000465559 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
FDPS-205ENST00000465559 KDM5BQ9UGL1 1544 aa25.36■■□□□ 1.65
FDPS-205ENST00000465559 FHOD3Q2V2M9 1422 aa25.36■■□□□ 1.65
FDPS-205ENST00000465559 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
FDPS-205ENST00000465559 NPM1P06748 294 aaKnown RBP eCLIP25.3■■□□□ 1.643e-6■□□□□ 8.1
FDPS-205ENST00000465559 ZCCHC11Q5TAX3 1644 aaKnown RBP25.28■■□□□ 1.64
FDPS-205ENST00000465559 RAPGEF6Q8TEU7 1601 aa25.27■■□□□ 1.64
FDPS-205ENST00000465559 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
FDPS-205ENST00000465559 LOC105371045A0A1W2PR82 267 aa25.22■■□□□ 1.63
FDPS-205ENST00000465559 ABCC10Q5T3U5 1492 aa25.21■■□□□ 1.63
FDPS-205ENST00000465559 ASXL2Q76L83 1435 aa25.2■■□□□ 1.63
FDPS-205ENST00000465559 TRHP20396 242 aaPredicted RBP25.2■■□□□ 1.62
FDPS-205ENST00000465559 NUP153P49790 1475 aaKnown RBP25.2■■□□□ 1.62
FDPS-205ENST00000465559 CLIP1P30622 1438 aa25.2■■□□□ 1.62
FDPS-205ENST00000465559 DIP2BQ9P265 1576 aa25.19■■□□□ 1.62
FDPS-205ENST00000465559 ATP10BO94823 1461 aa25.19■■□□□ 1.62
FDPS-205ENST00000465559 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
FDPS-205ENST00000465559 CEP162Q5TB80 1403 aa25.12■■□□□ 1.61
FDPS-205ENST00000465559 WDR7Q9Y4E6 1490 aa25.1■■□□□ 1.61
FDPS-205ENST00000465559 GLI2P10070 1586 aa25.1■■□□□ 1.61
FDPS-205ENST00000465559 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
FDPS-205ENST00000465559 HECW1Q76N89 1606 aa25.07■■□□□ 1.6
FDPS-205ENST00000465559 FAM69CQ0P6D2 419 aa25.06■■□□□ 1.6
FDPS-205ENST00000465559 LRRIQ1Q96JM4 1722 aa25.04■■□□□ 1.6
FDPS-205ENST00000465559 CASKIN1Q8WXD9 1431 aa25.03■■□□□ 1.6
FDPS-205ENST00000465559 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
FDPS-205ENST00000465559 ARID3CA6NKF2 412 aa25.02■■□□□ 1.6
FDPS-205ENST00000465559 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
FDPS-205ENST00000465559 MAP3K4Q9Y6R4 1608 aa24.98■■□□□ 1.59
FDPS-205ENST00000465559 FYCO1Q9BQS8 1478 aa24.98■■□□□ 1.59
FDPS-205ENST00000465559 PPRC1Q5VV67 1664 aaKnown RBP24.96■■□□□ 1.59
FDPS-205ENST00000465559 TSPOAP1O95153 1857 aa24.94■■□□□ 1.58
FDPS-205ENST00000465559 CFAP43Q8NDM7 1665 aa24.93■■□□□ 1.58
FDPS-205ENST00000465559 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.91■■□□□ 1.58
FDPS-205ENST00000465559 HNRNPUL2Q1KMD3 747 aaKnown RBP24.91■■□□□ 1.58
FDPS-205ENST00000465559 ABCA9Q8IUA7 1624 aa24.9■■□□□ 1.58
FDPS-205ENST00000465559 KCNH8Q96L42 1107 aa24.9■■□□□ 1.58
FDPS-205ENST00000465559 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.58
FDPS-205ENST00000465559 PLEKHD1A6NEE1 506 aa24.89■■□□□ 1.58
FDPS-205ENST00000465559 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
FDPS-205ENST00000465559 MAGI3Q5TCQ9 1506 aa24.84■■□□□ 1.57
FDPS-205ENST00000465559 VPS8Q8N3P4 1428 aa24.84■■□□□ 1.57
FDPS-205ENST00000465559 CD109Q6YHK3 1445 aa24.83■■□□□ 1.57
FDPS-205ENST00000465559 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
FDPS-205ENST00000465559 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
FDPS-205ENST00000465559 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.81■■□□□ 1.566e-8■■■■□ 20.3
FDPS-205ENST00000465559 TEX14Q8IWB6 1497 aa24.77■■□□□ 1.56
FDPS-205ENST00000465559 TTC37Q6PGP7 1564 aa24.77■■□□□ 1.56
FDPS-205ENST00000465559 KIF14Q15058 1648 aa24.75■■□□□ 1.55
FDPS-205ENST00000465559 KDM6BO15054 1643 aa24.69■■□□□ 1.54
FDPS-205ENST00000465559 COL17A1Q9UMD9 1497 aaPredicted RBP24.69■■□□□ 1.54
FDPS-205ENST00000465559 TIAM1Q13009 1591 aa24.67■■□□□ 1.54
FDPS-205ENST00000465559 MAP3K1Q13233 1512 aa24.67■■□□□ 1.54
FDPS-205ENST00000465559 MYO5CQ9NQX4 1742 aa24.66■■□□□ 1.54
FDPS-205ENST00000465559 ARAP3Q8WWN8 1544 aa24.66■■□□□ 1.54
FDPS-205ENST00000465559 NEO1Q92859 1461 aa24.65■■□□□ 1.54
FDPS-205ENST00000465559 PLCH2O75038 1416 aa24.65■■□□□ 1.54
FDPS-205ENST00000465559 PHLDB1Q86UU1 1377 aa24.64■■□□□ 1.53
FDPS-205ENST00000465559 EHBP1L1Q8N3D4 1523 aa24.62■■□□□ 1.53
FDPS-205ENST00000465559 CDC42BPBQ9Y5S2 1711 aa24.61■■□□□ 1.53
FDPS-205ENST00000465559 MTUS2Q5JR59 1369 aa24.6■■□□□ 1.53
FDPS-205ENST00000465559 CDC42BPAQ5VT25 1732 aa24.59■■□□□ 1.53
FDPS-205ENST00000465559 CFAP74Q9C0B2 1584 aa24.59■■□□□ 1.53
FDPS-205ENST00000465559 FANCAO15360 1455 aa24.58■■□□□ 1.53
FDPS-205ENST00000465559 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
FDPS-205ENST00000465559 LRRC9Q6ZRR7 1453 aa24.56■■□□□ 1.52
FDPS-205ENST00000465559 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
FDPS-205ENST00000465559 GPATCH8Q9UKJ3 1502 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms