RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 PRG4Q92954 1404 aaPredicted RBP29.62■■■□□ 2.33
TOM1-213ENST00000465529 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
TOM1-213ENST00000465529 CARMIL1Q5VZK9 1371 aa29.56■■■□□ 2.32
TOM1-213ENST00000465529 KIAA0586Q9BVV6 1533 aa29.51■■■□□ 2.32
TOM1-213ENST00000465529 RAPGEF2Q9Y4G8 1499 aa29.34■■■□□ 2.29
TOM1-213ENST00000465529 IQGAP2Q13576 1575 aa29.33■■■□□ 2.29
TOM1-213ENST00000465529 ADCY10Q96PN6 1610 aa29.3■■■□□ 2.28
TOM1-213ENST00000465529 TTBK1Q5TCY1 1321 aaPredicted RBP29.23■■■□□ 2.27
TOM1-213ENST00000465529 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
TOM1-213ENST00000465529 DISP1Q96F81 1524 aa29.18■■■□□ 2.26
TOM1-213ENST00000465529 CARMIL2Q6F5E8 1435 aa29.18■■■□□ 2.26
TOM1-213ENST00000465529 PTPRGP23470 1445 aa29.17■■■□□ 2.26
TOM1-213ENST00000465529 CTTNBP2Q8WZ74 1663 aa29.16■■■□□ 2.26
TOM1-213ENST00000465529 TNIKQ9UKE5 1360 aa29.15■■■□□ 2.26
TOM1-213ENST00000465529 PRXQ9BXM0 1461 aa29.13■■■□□ 2.25
TOM1-213ENST00000465529 UGGT2Q9NYU1 1516 aa29.13■■■□□ 2.25
TOM1-213ENST00000465529 MAPKBP1O60336 1514 aa29.11■■■□□ 2.25
TOM1-213ENST00000465529 NPM1P06748 294 aaKnown RBP eCLIP29.1■■■□□ 2.25
TOM1-213ENST00000465529 KIAA0556O60303 1618 aa29.09■■■□□ 2.25
TOM1-213ENST00000465529 ABCC10Q5T3U5 1492 aa29.04■■■□□ 2.24
TOM1-213ENST00000465529 DIP2BQ9P265 1576 aa29.04■■■□□ 2.24
TOM1-213ENST00000465529 FAM69CQ0P6D2 419 aa29■■■□□ 2.23
TOM1-213ENST00000465529 ABCC2Q92887 1545 aa28.99■■■□□ 2.23
TOM1-213ENST00000465529 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
TOM1-213ENST00000465529 CSRNP3Q8WYN3 585 aa28.96■■■□□ 2.23
TOM1-213ENST00000465529 UHRF1BP1LA0JNW5 1464 aa28.95■■■□□ 2.22
TOM1-213ENST00000465529 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
TOM1-213ENST00000465529 TSPOAP1O95153 1857 aa28.89■■■□□ 2.22
TOM1-213ENST00000465529 ASXL2Q76L83 1435 aa28.87■■■□□ 2.21
TOM1-213ENST00000465529 GOLGA3Q08378 1498 aa28.87■■■□□ 2.21
TOM1-213ENST00000465529 ZCCHC11Q5TAX3 1644 aaKnown RBP28.86■■■□□ 2.21
TOM1-213ENST00000465529 EEA1Q15075 1411 aa28.86■■■□□ 2.21
TOM1-213ENST00000465529 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
TOM1-213ENST00000465529 KDM5BQ9UGL1 1544 aa28.84■■■□□ 2.21
TOM1-213ENST00000465529 CHIC1Q5VXU3 224 aa28.8■■■□□ 2.2
TOM1-213ENST00000465529 ABCA8O94911 1581 aa28.79■■■□□ 2.2
TOM1-213ENST00000465529 P3H3Q8IVL6 736 aa28.78■■■□□ 2.2
TOM1-213ENST00000465529 SAMD9Q5K651 1589 aa28.74■■■□□ 2.19
TOM1-213ENST00000465529 GLI2P10070 1586 aa28.73■■■□□ 2.19
TOM1-213ENST00000465529 PPRC1Q5VV67 1664 aaKnown RBP28.73■■■□□ 2.19
TOM1-213ENST00000465529 EPRSP07814 1512 aaKnown RBP28.7■■■□□ 2.19
TOM1-213ENST00000465529 KIF21BO75037 1637 aa28.7■■■□□ 2.19
TOM1-213ENST00000465529 RANGAP1P46060 587 aaPredicted RBP28.69■■■□□ 2.18
TOM1-213ENST00000465529 KDM6BO15054 1643 aa28.69■■■□□ 2.18
TOM1-213ENST00000465529 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
TOM1-213ENST00000465529 MAP3K4Q9Y6R4 1608 aa28.64■■■□□ 2.18
TOM1-213ENST00000465529 WDR7Q9Y4E6 1490 aa28.64■■■□□ 2.17
TOM1-213ENST00000465529 ARID3CA6NKF2 412 aa28.63■■■□□ 2.17
TOM1-213ENST00000465529 FHOD3Q2V2M9 1422 aa28.58■■■□□ 2.17
TOM1-213ENST00000465529 RAPGEF6Q8TEU7 1601 aa28.55■■■□□ 2.16
TOM1-213ENST00000465529 ATP10BO94823 1461 aa28.53■■■□□ 2.16
TOM1-213ENST00000465529 KCNH8Q96L42 1107 aa28.51■■■□□ 2.15
TOM1-213ENST00000465529 COL17A1Q9UMD9 1497 aaPredicted RBP28.47■■■□□ 2.15
TOM1-213ENST00000465529 CFAP43Q8NDM7 1665 aa28.46■■■□□ 2.15
TOM1-213ENST00000465529 EFCAB5A4FU69 1503 aa28.45■■■□□ 2.15
TOM1-213ENST00000465529 AEBP2Q6ZN18 517 aaPredicted RBP28.45■■■□□ 2.14
TOM1-213ENST00000465529 UBTFP17480 764 aaKnown RBP28.44■■■□□ 2.14
TOM1-213ENST00000465529 NUP153P49790 1475 aaKnown RBP28.44■■■□□ 2.14
TOM1-213ENST00000465529 TEX14Q8IWB6 1497 aa28.44■■■□□ 2.14
TOM1-213ENST00000465529 CD109Q6YHK3 1445 aa28.41■■■□□ 2.14
TOM1-213ENST00000465529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.36■■■□□ 2.13
TOM1-213ENST00000465529 HNRNPUL2Q1KMD3 747 aaKnown RBP28.36■■■□□ 2.13
TOM1-213ENST00000465529 MAGI3Q5TCQ9 1506 aa28.36■■■□□ 2.13
TOM1-213ENST00000465529 ARHGAP35Q9NRY4 1499 aa28.32■■■□□ 2.12
TOM1-213ENST00000465529 ABCA9Q8IUA7 1624 aa28.31■■■□□ 2.12
TOM1-213ENST00000465529 CDK13Q14004 1512 aaKnown RBP28.25■■■□□ 2.11
TOM1-213ENST00000465529 KDM4FA0A1W2PPD8 638 aa28.24■■■□□ 2.11
TOM1-213ENST00000465529 FMN1Q68DA7 1419 aa28.17■■■□□ 2.1
TOM1-213ENST00000465529 PLEKHD1A6NEE1 506 aa28.16■■■□□ 2.1
TOM1-213ENST00000465529 HECW1Q76N89 1606 aa28.16■■■□□ 2.1
TOM1-213ENST00000465529 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
TOM1-213ENST00000465529 LRRIQ1Q96JM4 1722 aa28.13■■■□□ 2.09
TOM1-213ENST00000465529 TTC37Q6PGP7 1564 aa28.13■■■□□ 2.09
TOM1-213ENST00000465529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.13■■■□□ 2.09
TOM1-213ENST00000465529 ARAP3Q8WWN8 1544 aa28.13■■■□□ 2.09
TOM1-213ENST00000465529 ADGRL1O94910 1474 aa28.11■■■□□ 2.09
TOM1-213ENST00000465529 NEO1Q92859 1461 aa28.07■■■□□ 2.08
TOM1-213ENST00000465529 PCF11O94913 1555 aaKnown RBP28.04■■■□□ 2.08
TOM1-213ENST00000465529 FRMPD1Q5SYB0 1578 aa28.04■■■□□ 2.08
TOM1-213ENST00000465529 RAPGEF3O95398 923 aa28.03■■■□□ 2.08
TOM1-213ENST00000465529 PHLDB1Q86UU1 1377 aa28■■■□□ 2.07
TOM1-213ENST00000465529 KIF14Q15058 1648 aa28■■■□□ 2.07
TOM1-213ENST00000465529 FANCAO15360 1455 aa27.97■■■□□ 2.07
TOM1-213ENST00000465529 CLIP1P30622 1438 aa27.97■■■□□ 2.07
TOM1-213ENST00000465529 AKNAQ7Z591 1439 aa27.96■■■□□ 2.07
TOM1-213ENST00000465529 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
TOM1-213ENST00000465529 RICTORQ6R327 1708 aa27.94■■■□□ 2.06
TOM1-213ENST00000465529 CASKIN1Q8WXD9 1431 aa27.93■■■□□ 2.06
TOM1-213ENST00000465529 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
TOM1-213ENST00000465529 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
TOM1-213ENST00000465529 DENND4BO75064 1496 aaPredicted RBP27.89■■■□□ 2.06
TOM1-213ENST00000465529 PLCH2O75038 1416 aa27.89■■■□□ 2.06
TOM1-213ENST00000465529 CDK11AQ9UQ88 783 aaPredicted RBP27.88■■■□□ 2.05
TOM1-213ENST00000465529 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
TOM1-213ENST00000465529 FYCO1Q9BQS8 1478 aa27.85■■■□□ 2.05
TOM1-213ENST00000465529 ARHGEF40Q8TER5 1519 aa27.82■■■□□ 2.04
TOM1-213ENST00000465529 SCAPERQ9BY12 1400 aa27.79■■■□□ 2.04
TOM1-213ENST00000465529 CDC42BPBQ9Y5S2 1711 aa27.78■■■□□ 2.04
TOM1-213ENST00000465529 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
TOM1-213ENST00000465529 ZMYM4Q5VZL5 1548 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms