RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 NISCHQ9Y2I1 1504 aa42.56■■■■■ 4.4
TOM1-213ENST00000465529 CCDC180Q9P1Z9 1646 aa38.02■■■■□ 3.68
TOM1-213ENST00000465529 ABCC9O60706 1549 aa37.71■■■■□ 3.63
TOM1-213ENST00000465529 RB1CC1Q8TDY2 1594 aa35.98■■■■□ 3.35
TOM1-213ENST00000465529 NACADO15069 1562 aa35.81■■■■□ 3.32
TOM1-213ENST00000465529 DCAF8L2P0C7V8 631 aa35.78■■■■□ 3.32
TOM1-213ENST00000465529 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
TOM1-213ENST00000465529 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
TOM1-213ENST00000465529 UNC13AQ9UPW8 1703 aa35.32■■■■□ 3.25
TOM1-213ENST00000465529 PABPN1Q86U42 306 aaKnown RBP eCLIP35.17■■■■□ 3.22
TOM1-213ENST00000465529 DCAF1Q9Y4B6 1507 aa35.11■■■■□ 3.21
TOM1-213ENST00000465529 DNAJC5BQ9UF47 199 aa35.04■■■■□ 3.2
TOM1-213ENST00000465529 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
TOM1-213ENST00000465529 SCRIBQ14160 1630 aa34.77■■■■□ 3.16
TOM1-213ENST00000465529 SHROOM4Q9ULL8 1493 aa34.4■■■■□ 3.1
TOM1-213ENST00000465529 EIF4G1Q04637 1599 aaKnown RBP34.08■■■■□ 3.05
TOM1-213ENST00000465529 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
TOM1-213ENST00000465529 CECR2Q9BXF3 1484 aa33.88■■■■□ 3.01
TOM1-213ENST00000465529 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
TOM1-213ENST00000465529 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
TOM1-213ENST00000465529 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
TOM1-213ENST00000465529 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
TOM1-213ENST00000465529 SMARCA2P51531 1590 aa32.95■■■□□ 2.86
TOM1-213ENST00000465529 MROH2BQ7Z745 1585 aa32.87■■■□□ 2.85
TOM1-213ENST00000465529 HMGXB3Q12766 1538 aa32.87■■■□□ 2.85
TOM1-213ENST00000465529 PEG3Q9GZU2 1588 aa32.77■■■□□ 2.84
TOM1-213ENST00000465529 BAZ1BQ9UIG0 1483 aaKnown RBP32.75■■■□□ 2.83
TOM1-213ENST00000465529 NESP48681 1621 aa32.54■■■□□ 2.8
TOM1-213ENST00000465529 WIZO95785 1651 aa32.53■■■□□ 2.8
TOM1-213ENST00000465529 ERCC6Q03468 1493 aa32.47■■■□□ 2.79
TOM1-213ENST00000465529 RSF1Q96T23 1441 aaPredicted RBP32.28■■■□□ 2.76
TOM1-213ENST00000465529 LAMC3Q9Y6N6 1575 aa32.27■■■□□ 2.76
TOM1-213ENST00000465529 CUX2O14529 1486 aa32.23■■■□□ 2.75
TOM1-213ENST00000465529 KIF21AQ7Z4S6 1674 aa32.15■■■□□ 2.74
TOM1-213ENST00000465529 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
TOM1-213ENST00000465529 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
TOM1-213ENST00000465529 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
TOM1-213ENST00000465529 PDS5BQ9NTI5 1447 aa32.02■■■□□ 2.72
TOM1-213ENST00000465529 CFTRP13569 1480 aa31.8■■■□□ 2.68
TOM1-213ENST00000465529 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
TOM1-213ENST00000465529 DNAJC5Q9H3Z4 198 aa31.77■■■□□ 2.68
TOM1-213ENST00000465529 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
TOM1-213ENST00000465529 CEP164Q9UPV0 1460 aa31.73■■■□□ 2.67
TOM1-213ENST00000465529 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
TOM1-213ENST00000465529 WDR62O43379 1518 aa31.7■■■□□ 2.67
TOM1-213ENST00000465529 PRDM2Q13029 1718 aa31.6■■■□□ 2.65
TOM1-213ENST00000465529 URB2Q14146 1524 aaKnown RBP31.51■■■□□ 2.63
TOM1-213ENST00000465529 TOPBP1Q92547 1522 aa31.21■■■□□ 2.59
TOM1-213ENST00000465529 SUPT5HO00267 1087 aaKnown RBP31.18■■■□□ 2.58
TOM1-213ENST00000465529 DNMBPQ6XZF7 1577 aa31.12■■■□□ 2.57
TOM1-213ENST00000465529 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
TOM1-213ENST00000465529 IFT140Q96RY7 1462 aa31.06■■■□□ 2.56
TOM1-213ENST00000465529 ABCC8Q09428 1581 aa31.05■■■□□ 2.56
TOM1-213ENST00000465529 TARBP1Q13395 1621 aaKnown RBP30.92■■■□□ 2.54
TOM1-213ENST00000465529 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
TOM1-213ENST00000465529 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
TOM1-213ENST00000465529 CUX1P39880 1505 aa30.85■■■□□ 2.53
TOM1-213ENST00000465529 RAD54L2Q9Y4B4 1467 aa30.84■■■□□ 2.53
TOM1-213ENST00000465529 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.52
TOM1-213ENST00000465529 OSCARQ8IYS5 282 aa30.8■■■□□ 2.52
TOM1-213ENST00000465529 FGD5Q6ZNL6 1462 aa30.8■■■□□ 2.52
TOM1-213ENST00000465529 SOGA1O94964 1423 aa30.74■■■□□ 2.51
TOM1-213ENST00000465529 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
TOM1-213ENST00000465529 CHD1O14646 1710 aa30.65■■■□□ 2.5
TOM1-213ENST00000465529 TRIM41Q8WV44 630 aa30.63■■■□□ 2.49
TOM1-213ENST00000465529 WDR97A6NE52 1622 aa30.6■■■□□ 2.49
TOM1-213ENST00000465529 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.48
TOM1-213ENST00000465529 FBLN2P98095 1184 aa30.5■■■□□ 2.47
TOM1-213ENST00000465529 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
TOM1-213ENST00000465529 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
TOM1-213ENST00000465529 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
TOM1-213ENST00000465529 SYNJ1O43426 1573 aa30.46■■■□□ 2.47
TOM1-213ENST00000465529 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
TOM1-213ENST00000465529 PBRM1Q86U86 1689 aa30.44■■■□□ 2.46
TOM1-213ENST00000465529 GRIN2BQ13224 1484 aa30.43■■■□□ 2.46
TOM1-213ENST00000465529 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
TOM1-213ENST00000465529 WRNQ14191 1432 aaPredicted RBP eCLIP30.42■■■□□ 2.46
TOM1-213ENST00000465529 TOP2BQ02880 1626 aa30.42■■■□□ 2.46
TOM1-213ENST00000465529 ARHGEF11O15085 1522 aa30.4■■■□□ 2.46
TOM1-213ENST00000465529 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
TOM1-213ENST00000465529 GAPVD1Q14C86 1478 aa30.39■■■□□ 2.46
TOM1-213ENST00000465529 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
TOM1-213ENST00000465529 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
TOM1-213ENST00000465529 SYNJ2O15056 1496 aa30.28■■■□□ 2.44
TOM1-213ENST00000465529 CLASP1Q7Z460 1538 aa30.24■■■□□ 2.43
TOM1-213ENST00000465529 ARAP1Q96P48 1450 aa30.15■■■□□ 2.42
TOM1-213ENST00000465529 ADAMTS12P58397 1594 aa30.15■■■□□ 2.42
TOM1-213ENST00000465529 CYB5RLQ6IPT4 315 aa30.12■■■□□ 2.41
TOM1-213ENST00000465529 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
TOM1-213ENST00000465529 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
TOM1-213ENST00000465529 CEP170Q5SW79 1584 aa30■■■□□ 2.39
TOM1-213ENST00000465529 FHAD1B1AJZ9 1412 aa29.99■■■□□ 2.39
TOM1-213ENST00000465529 NUP160Q12769 1436 aa29.94■■■□□ 2.38
TOM1-213ENST00000465529 ERCC6L2Q5T890 1561 aa29.89■■■□□ 2.38
TOM1-213ENST00000465529 SHROOM2Q13796 1616 aa29.79■■■□□ 2.36
TOM1-213ENST00000465529 KIF27Q86VH2 1401 aa29.79■■■□□ 2.36
TOM1-213ENST00000465529 IGF1RP08069 1367 aa29.75■■■□□ 2.35
TOM1-213ENST00000465529 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
TOM1-213ENST00000465529 CUL7Q14999 1698 aa29.7■■■□□ 2.35
TOM1-213ENST00000465529 TRHP20396 242 aaPredicted RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms