RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 DIP2BQ9P265 1576 aa27.49■■□□□ 1.99
HDAC6-214ENST00000465269 KDM6BO15054 1643 aa27.46■■□□□ 1.99
HDAC6-214ENST00000465269 NPM1P06748 294 aaKnown RBP eCLIP27.43■■□□□ 1.98
HDAC6-214ENST00000465269 TSPOAP1O95153 1857 aa27.42■■□□□ 1.98
HDAC6-214ENST00000465269 MAPKBP1O60336 1514 aa27.42■■□□□ 1.98
HDAC6-214ENST00000465269 ADCY10Q96PN6 1610 aa27.41■■□□□ 1.98
HDAC6-214ENST00000465269 ERICH3Q5RHP9 1530 aa27.4■■□□□ 1.98
HDAC6-214ENST00000465269 TOP2BQ02880 1626 aa27.35■■□□□ 1.97
HDAC6-214ENST00000465269 RUSC2Q8N2Y8 1516 aa27.35■■□□□ 1.97
HDAC6-214ENST00000465269 BIVM-ERCC5R4GMW8 1640 aa27.34■■□□□ 1.97
HDAC6-214ENST00000465269 ADGRL1O94910 1474 aa27.19■■□□□ 1.94
HDAC6-214ENST00000465269 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
HDAC6-214ENST00000465269 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
HDAC6-214ENST00000465269 HECW2Q9P2P5 1572 aa27.09■■□□□ 1.93
HDAC6-214ENST00000465269 PPRC1Q5VV67 1664 aaKnown RBP27.09■■□□□ 1.93
HDAC6-214ENST00000465269 KIAA0586Q9BVV6 1533 aa27.08■■□□□ 1.93
HDAC6-214ENST00000465269 COL17A1Q9UMD9 1497 aaPredicted RBP27.05■■□□□ 1.92
HDAC6-214ENST00000465269 PTPRGP23470 1445 aa27.04■■□□□ 1.92
HDAC6-214ENST00000465269 ASXL2Q76L83 1435 aa27.02■■□□□ 1.92
HDAC6-214ENST00000465269 ABCC2Q92887 1545 aa26.98■■□□□ 1.91
HDAC6-214ENST00000465269 IGF1RP08069 1367 aa26.96■■□□□ 1.91
HDAC6-214ENST00000465269 GLI2P10070 1586 aa26.93■■□□□ 1.9
HDAC6-214ENST00000465269 CUL7Q14999 1698 aa26.92■■□□□ 1.9
HDAC6-214ENST00000465269 PLB1Q6P1J6 1458 aa26.92■■□□□ 1.9
HDAC6-214ENST00000465269 TNIKQ9UKE5 1360 aa26.88■■□□□ 1.89
HDAC6-214ENST00000465269 EPRSP07814 1512 aaKnown RBP26.83■■□□□ 1.89
HDAC6-214ENST00000465269 CARMIL2Q6F5E8 1435 aa26.82■■□□□ 1.88
HDAC6-214ENST00000465269 MAP3K4Q9Y6R4 1608 aa26.81■■□□□ 1.88
HDAC6-214ENST00000465269 KIF27Q86VH2 1401 aa26.79■■□□□ 1.88
HDAC6-214ENST00000465269 UACAQ9BZF9 1416 aa26.78■■□□□ 1.88
HDAC6-214ENST00000465269 UHRF1BP1LA0JNW5 1464 aa26.78■■□□□ 1.88
HDAC6-214ENST00000465269 CARMIL1Q5VZK9 1371 aa26.73■■□□□ 1.87
HDAC6-214ENST00000465269 TEX14Q8IWB6 1497 aa26.73■■□□□ 1.87
HDAC6-214ENST00000465269 IQGAP2Q13576 1575 aa26.72■■□□□ 1.87
HDAC6-214ENST00000465269 DISP1Q96F81 1524 aa26.71■■□□□ 1.87
HDAC6-214ENST00000465269 FBXO41Q8TF61 875 aa26.71■■□□□ 1.87
HDAC6-214ENST00000465269 KDM5BQ9UGL1 1544 aa26.7■■□□□ 1.87
HDAC6-214ENST00000465269 ZCCHC11Q5TAX3 1644 aaKnown RBP26.7■■□□□ 1.86
HDAC6-214ENST00000465269 KIF21BO75037 1637 aa26.58■■□□□ 1.85
HDAC6-214ENST00000465269 WDR7Q9Y4E6 1490 aa26.58■■□□□ 1.85
HDAC6-214ENST00000465269 KCNH8Q96L42 1107 aa26.55■■□□□ 1.84
HDAC6-214ENST00000465269 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
HDAC6-214ENST00000465269 KIAA0556O60303 1618 aa26.5■■□□□ 1.83
HDAC6-214ENST00000465269 UGGT2Q9NYU1 1516 aa26.5■■□□□ 1.83
HDAC6-214ENST00000465269 MAGI3Q5TCQ9 1506 aa26.48■■□□□ 1.83
HDAC6-214ENST00000465269 CFAP43Q8NDM7 1665 aa26.43■■□□□ 1.82
HDAC6-214ENST00000465269 PTPRMP28827 1452 aa26.41■■□□□ 1.82
HDAC6-214ENST00000465269 RAPGEF2Q9Y4G8 1499 aa26.36■■□□□ 1.81
HDAC6-214ENST00000465269 ARID3CA6NKF2 412 aa26.36■■□□□ 1.81
HDAC6-214ENST00000465269 ADAMTSL3P82987 1691 aa26.34■■□□□ 1.81
HDAC6-214ENST00000465269 ABCA8O94911 1581 aa26.32■■□□□ 1.8
HDAC6-214ENST00000465269 LMTK3Q96Q04 1460 aa26.3■■□□□ 1.8
HDAC6-214ENST00000465269 ARAP3Q8WWN8 1544 aa26.29■■□□□ 1.8
HDAC6-214ENST00000465269 RAPGEF3O95398 923 aa26.29■■□□□ 1.8
HDAC6-214ENST00000465269 PCF11O94913 1555 aaKnown RBP26.28■■□□□ 1.8
HDAC6-214ENST00000465269 MADDQ8WXG6 1647 aa26.25■■□□□ 1.79
HDAC6-214ENST00000465269 HSPA2P54652 639 aa26.23■■□□□ 1.79
HDAC6-214ENST00000465269 ARID4BQ4LE39 1312 aaPredicted RBP26.21■■□□□ 1.79
HDAC6-214ENST00000465269 BCORL1Q5H9F3 1711 aa26.2■■□□□ 1.79
HDAC6-214ENST00000465269 PLPPR3Q6T4P5 718 aa26.2■■□□□ 1.78
HDAC6-214ENST00000465269 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
HDAC6-214ENST00000465269 GOLGA3Q08378 1498 aa26.16■■□□□ 1.78
HDAC6-214ENST00000465269 ILDR2Q71H61 639 aa26.15■■□□□ 1.78
HDAC6-214ENST00000465269 FRMPD1Q5SYB0 1578 aa26.14■■□□□ 1.78
HDAC6-214ENST00000465269 RIMS1Q86UR5 1692 aaKnown RBP26.13■■□□□ 1.77
HDAC6-214ENST00000465269 ATP10BO94823 1461 aa26.13■■□□□ 1.77
HDAC6-214ENST00000465269 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
HDAC6-214ENST00000465269 ABCA9Q8IUA7 1624 aa26.1■■□□□ 1.77
HDAC6-214ENST00000465269 CERKQ8TCT0 537 aa26.09■■□□□ 1.77
HDAC6-214ENST00000465269 PHLDB1Q86UU1 1377 aa26.04■■□□□ 1.76
HDAC6-214ENST00000465269 DISP3Q9P2K9 1392 aa26.04■■□□□ 1.76
HDAC6-214ENST00000465269 NEO1Q92859 1461 aa26.03■■□□□ 1.76
HDAC6-214ENST00000465269 ARHGEF40Q8TER5 1519 aa25.99■■□□□ 1.75
HDAC6-214ENST00000465269 SOCS7O14512 581 aa25.97■■□□□ 1.75
HDAC6-214ENST00000465269 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
HDAC6-214ENST00000465269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
HDAC6-214ENST00000465269 HNRNPUL2Q1KMD3 747 aaKnown RBP25.96■■□□□ 1.75
HDAC6-214ENST00000465269 MLECQ14165 292 aa25.93■■□□□ 1.74
HDAC6-214ENST00000465269 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
HDAC6-214ENST00000465269 PRXQ9BXM0 1461 aa25.9■■□□□ 1.74
HDAC6-214ENST00000465269 DENND4BO75064 1496 aaPredicted RBP25.89■■□□□ 1.73
HDAC6-214ENST00000465269 YEATS2Q9ULM3 1422 aa25.88■■□□□ 1.73
HDAC6-214ENST00000465269 RAPGEF6Q8TEU7 1601 aa25.87■■□□□ 1.73
HDAC6-214ENST00000465269 AKNAQ7Z591 1439 aa25.84■■□□□ 1.73
HDAC6-214ENST00000465269 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
HDAC6-214ENST00000465269 FANCAO15360 1455 aa25.83■■□□□ 1.73
HDAC6-214ENST00000465269 FHOD3Q2V2M9 1422 aa25.82■■□□□ 1.72
HDAC6-214ENST00000465269 NUP153P49790 1475 aaKnown RBP25.82■■□□□ 1.72
HDAC6-214ENST00000465269 POGZQ7Z3K3 1410 aa25.81■■□□□ 1.72
HDAC6-214ENST00000465269 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
HDAC6-214ENST00000465269 FER1L4A9Z1Z3 1794 aa25.79■■□□□ 1.72
HDAC6-214ENST00000465269 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
HDAC6-214ENST00000465269 CEBPAP49715 358 aaPredicted RBP25.78■■□□□ 1.72
HDAC6-214ENST00000465269 SAMD9Q5K651 1589 aa25.78■■□□□ 1.72
HDAC6-214ENST00000465269 ZMYM4Q5VZL5 1548 aa25.76■■□□□ 1.71
HDAC6-214ENST00000465269 SPATA31D1Q6ZQQ2 1576 aa25.76■■□□□ 1.71
HDAC6-214ENST00000465269 TTC37Q6PGP7 1564 aa25.75■■□□□ 1.71
HDAC6-214ENST00000465269 HECW1Q76N89 1606 aa25.73■■□□□ 1.71
HDAC6-214ENST00000465269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.71
HDAC6-214ENST00000465269 EFCAB5A4FU69 1503 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms