RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-210	ENST00000464012	PRG4	Q92954	1404 aa	Predicted RBP	33.22	■■■□□ 2.91
CCHCR1-210	ENST00000464012	JPH4	Q96JJ6	628 aa		33.17	■■■□□ 2.9
CCHCR1-210	ENST00000464012	CARMIL1	Q5VZK9	1371 aa		33.12	■■■□□ 2.89
CCHCR1-210	ENST00000464012	KIAA0586	Q9BVV6	1533 aa		33.1	■■■□□ 2.89
CCHCR1-210	ENST00000464012	IQGAP2	Q13576	1575 aa		32.93	■■■□□ 2.86
CCHCR1-210	ENST00000464012	RAPGEF2	Q9Y4G8	1499 aa		32.9	■■■□□ 2.86
CCHCR1-210	ENST00000464012	ADCY10	Q96PN6	1610 aa		32.86	■■■□□ 2.85
CCHCR1-210	ENST00000464012	KIF13A	Q9H1H9	1805 aa		32.81	■■■□□ 2.84
CCHCR1-210	ENST00000464012	CTTNBP2	Q8WZ74	1663 aa		32.78	■■■□□ 2.84
CCHCR1-210	ENST00000464012	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.77	■■■□□ 2.84
CCHCR1-210	ENST00000464012	CARMIL2	Q6F5E8	1435 aa		32.77	■■■□□ 2.84
CCHCR1-210	ENST00000464012	PTPRG	P23470	1445 aa		32.72	■■■□□ 2.83
CCHCR1-210	ENST00000464012	NPM1	P06748	294 aa	Known RBP eCLIP	32.72	■■■□□ 2.83
CCHCR1-210	ENST00000464012	TNIK	Q9UKE5	1360 aa		32.7	■■■□□ 2.83
CCHCR1-210	ENST00000464012	DISP1	Q96F81	1524 aa		32.69	■■■□□ 2.82
CCHCR1-210	ENST00000464012	MAPKBP1	O60336	1514 aa		32.68	■■■□□ 2.82
CCHCR1-210	ENST00000464012	UGGT2	Q9NYU1	1516 aa		32.67	■■■□□ 2.82
CCHCR1-210	ENST00000464012	KIAA0556	O60303	1618 aa		32.64	■■■□□ 2.82
CCHCR1-210	ENST00000464012	PRX	Q9BXM0	1461 aa		32.62	■■■□□ 2.81
CCHCR1-210	ENST00000464012	DIP2B	Q9P265	1576 aa		32.59	■■■□□ 2.81
CCHCR1-210	ENST00000464012	ABCC10	Q5T3U5	1492 aa		32.58	■■■□□ 2.81
CCHCR1-210	ENST00000464012	FAM69C	Q0P6D2	419 aa		32.53	■■■□□ 2.8
CCHCR1-210	ENST00000464012	ABCC2	Q92887	1545 aa		32.52	■■■□□ 2.8
CCHCR1-210	ENST00000464012	UACA	Q9BZF9	1416 aa		32.5	■■■□□ 2.79
CCHCR1-210	ENST00000464012	UHRF1BP1L	A0JNW5	1464 aa		32.48	■■■□□ 2.79
CCHCR1-210	ENST00000464012	TSPOAP1	O95153	1857 aa		32.47	■■■□□ 2.79
CCHCR1-210	ENST00000464012	GOLGA3	Q08378	1498 aa		32.44	■■■□□ 2.78
CCHCR1-210	ENST00000464012	CSRNP3	Q8WYN3	585 aa		32.44	■■■□□ 2.78
CCHCR1-210	ENST00000464012	EEA1	Q15075	1411 aa		32.41	■■■□□ 2.78
CCHCR1-210	ENST00000464012	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.4	■■■□□ 2.78
CCHCR1-210	ENST00000464012	ASXL2	Q76L83	1435 aa		32.38	■■■□□ 2.77
CCHCR1-210	ENST00000464012	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.35	■■■□□ 2.77
CCHCR1-210	ENST00000464012	KDM5B	Q9UGL1	1544 aa		32.35	■■■□□ 2.77
CCHCR1-210	ENST00000464012	PLB1	Q6P1J6	1458 aa		32.34	■■■□□ 2.77
CCHCR1-210	ENST00000464012	ABCA8	O94911	1581 aa		32.28	■■■□□ 2.76
CCHCR1-210	ENST00000464012	GLI2	P10070	1586 aa		32.24	■■■□□ 2.75
CCHCR1-210	ENST00000464012	KDM6B	O15054	1643 aa		32.24	■■■□□ 2.75
CCHCR1-210	ENST00000464012	P3H3	Q8IVL6	736 aa		32.23	■■■□□ 2.75
CCHCR1-210	ENST00000464012	SAMD9	Q5K651	1589 aa		32.23	■■■□□ 2.75
CCHCR1-210	ENST00000464012	PPRC1	Q5VV67	1664 aa	Known RBP	32.21	■■■□□ 2.75
CCHCR1-210	ENST00000464012	KIF21B	O75037	1637 aa		32.21	■■■□□ 2.75
CCHCR1-210	ENST00000464012	CHIC1	Q5VXU3	224 aa		32.19	■■■□□ 2.74
CCHCR1-210	ENST00000464012	EPRS	P07814	1512 aa	Known RBP	32.19	■■■□□ 2.74
CCHCR1-210	ENST00000464012	MAP3K4	Q9Y6R4	1608 aa		32.15	■■■□□ 2.74
CCHCR1-210	ENST00000464012	RANGAP1	P46060	587 aa	Predicted RBP	32.14	■■■□□ 2.74
CCHCR1-210	ENST00000464012	WDR7	Q9Y4E6	1490 aa		32.14	■■■□□ 2.74
CCHCR1-210	ENST00000464012	RAPGEF6	Q8TEU7	1601 aa		32.06	■■■□□ 2.72
CCHCR1-210	ENST00000464012	ARID3C	A6NKF2	412 aa		32.05	■■■□□ 2.72
CCHCR1-210	ENST00000464012	EHMT2	Q96KQ7	1210 aa		32.05	■■■□□ 2.72
CCHCR1-210	ENST00000464012	FHOD3	Q2V2M9	1422 aa		32.01	■■■□□ 2.72
CCHCR1-210	ENST00000464012	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.01	■■■□□ 2.71
CCHCR1-210	ENST00000464012	CFAP43	Q8NDM7	1665 aa		31.99	■■■□□ 2.71
CCHCR1-210	ENST00000464012	TEX14	Q8IWB6	1497 aa		31.97	■■■□□ 2.71
CCHCR1-210	ENST00000464012	KCNH8	Q96L42	1107 aa		31.97	■■■□□ 2.71
CCHCR1-210	ENST00000464012	ATP10B	O94823	1461 aa		31.96	■■■□□ 2.71
CCHCR1-210	ENST00000464012	EFCAB5	A4FU69	1503 aa		31.95	■■■□□ 2.71
CCHCR1-210	ENST00000464012	UBTF	P17480	764 aa	Known RBP	31.9	■■■□□ 2.7
CCHCR1-210	ENST00000464012	CD109	Q6YHK3	1445 aa		31.87	■■■□□ 2.69
CCHCR1-210	ENST00000464012	NUP153	P49790	1475 aa	Known RBP	31.86	■■■□□ 2.69
CCHCR1-210	ENST00000464012	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.84	■■■□□ 2.69
CCHCR1-210	ENST00000464012	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.84	■■■□□ 2.69
CCHCR1-210	ENST00000464012	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.84	■■■□□ 2.69
CCHCR1-210	ENST00000464012	MAGI3	Q5TCQ9	1506 aa		31.82	■■■□□ 2.68
CCHCR1-210	ENST00000464012	ABCA9	Q8IUA7	1624 aa		31.78	■■■□□ 2.68
CCHCR1-210	ENST00000464012	ARHGAP35	Q9NRY4	1499 aa		31.72	■■■□□ 2.67
CCHCR1-210	ENST00000464012	CDK13	Q14004	1512 aa	Known RBP	31.67	■■■□□ 2.66
CCHCR1-210	ENST00000464012	HECW1	Q76N89	1606 aa		31.64	■■■□□ 2.66
CCHCR1-210	ENST00000464012	KDM4F	A0A1W2PPD8	638 aa		31.62	■■■□□ 2.65
CCHCR1-210	ENST00000464012	FMN1	Q68DA7	1419 aa		31.62	■■■□□ 2.65
CCHCR1-210	ENST00000464012	PLEKHD1	A6NEE1	506 aa		31.6	■■■□□ 2.65
CCHCR1-210	ENST00000464012	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.59	■■■□□ 2.65
CCHCR1-210	ENST00000464012	ARAP3	Q8WWN8	1544 aa		31.56	■■■□□ 2.64
CCHCR1-210	ENST00000464012	ADGRL1	O94910	1474 aa		31.55	■■■□□ 2.64
CCHCR1-210	ENST00000464012	TTC37	Q6PGP7	1564 aa		31.55	■■■□□ 2.64
CCHCR1-210	ENST00000464012	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.54	■■■□□ 2.64	1e-5	■■■■□ 25.8
CCHCR1-210	ENST00000464012	LRRIQ1	Q96JM4	1722 aa		31.53	■■■□□ 2.64
CCHCR1-210	ENST00000464012	NEO1	Q92859	1461 aa		31.52	■■■□□ 2.64
CCHCR1-210	ENST00000464012	CFAP74	Q9C0B2	1584 aa		31.47	■■■□□ 2.63
CCHCR1-210	ENST00000464012	PHLDB1	Q86UU1	1377 aa		31.46	■■■□□ 2.63
CCHCR1-210	ENST00000464012	PCF11	O94913	1555 aa	Known RBP	31.45	■■■□□ 2.63
CCHCR1-210	ENST00000464012	FRMPD1	Q5SYB0	1578 aa		31.43	■■■□□ 2.62
CCHCR1-210	ENST00000464012	FANCA	O15360	1455 aa		31.4	■■■□□ 2.62
CCHCR1-210	ENST00000464012	RAPGEF3	O95398	923 aa		31.4	■■■□□ 2.62
CCHCR1-210	ENST00000464012	KIF14	Q15058	1648 aa		31.38	■■■□□ 2.61
CCHCR1-210	ENST00000464012	MYO5C	Q9NQX4	1742 aa		31.38	■■■□□ 2.61
CCHCR1-210	ENST00000464012	RICTOR	Q6R327	1708 aa		31.37	■■■□□ 2.61
CCHCR1-210	ENST00000464012	CLIP1	P30622	1438 aa		31.35	■■■□□ 2.61
CCHCR1-210	ENST00000464012	AKNA	Q7Z591	1439 aa		31.35	■■■□□ 2.61
CCHCR1-210	ENST00000464012	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.34	■■■□□ 2.61
CCHCR1-210	ENST00000464012	CASKIN1	Q8WXD9	1431 aa		31.32	■■■□□ 2.6
CCHCR1-210	ENST00000464012	DENND4B	O75064	1496 aa	Predicted RBP	31.31	■■■□□ 2.6
CCHCR1-210	ENST00000464012	TRO	Q12816	1431 aa	Predicted RBP	31.31	■■■□□ 2.6
CCHCR1-210	ENST00000464012	CCDC18	Q5T9S5	1454 aa		31.28	■■■□□ 2.6
CCHCR1-210	ENST00000464012	PLCH2	O75038	1416 aa		31.26	■■■□□ 2.6
CCHCR1-210	ENST00000464012	FYCO1	Q9BQS8	1478 aa		31.26	■■■□□ 2.59
CCHCR1-210	ENST00000464012	ARHGEF40	Q8TER5	1519 aa		31.24	■■■□□ 2.59
CCHCR1-210	ENST00000464012	ARHGAP5	Q13017	1502 aa		31.19	■■■□□ 2.58
CCHCR1-210	ENST00000464012	ZMYM4	Q5VZL5	1548 aa		31.19	■■■□□ 2.58
CCHCR1-210	ENST00000464012	CDC42BPB	Q9Y5S2	1711 aa		31.17	■■■□□ 2.58
CCHCR1-210	ENST00000464012	SCAPER	Q9BY12	1400 aa		31.16	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms