RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 RAPGEF2Q9Y4G8 1499 aa31.56■■■□□ 2.64
LMNB1-204ENST00000463908 PRXQ9BXM0 1461 aa31.55■■■□□ 2.64
LMNB1-204ENST00000463908 ARAP1Q96P48 1450 aa31.42■■■□□ 2.62
LMNB1-204ENST00000463908 KIAA0586Q9BVV6 1533 aa31.41■■■□□ 2.62
LMNB1-204ENST00000463908 JPH4Q96JJ6 628 aa31.4■■■□□ 2.62
LMNB1-204ENST00000463908 CYB5RLQ6IPT4 315 aa31.38■■■□□ 2.61
LMNB1-204ENST00000463908 SHROOM2Q13796 1616 aa31.32■■■□□ 2.6
LMNB1-204ENST00000463908 ERCC6L2Q5T890 1561 aa31.26■■■□□ 2.6
LMNB1-204ENST00000463908 PRG4Q92954 1404 aaPredicted RBP31.26■■■□□ 2.6
LMNB1-204ENST00000463908 KIF21BO75037 1637 aa31.24■■■□□ 2.59
LMNB1-204ENST00000463908 IQGAP2Q13576 1575 aa31.22■■■□□ 2.59
LMNB1-204ENST00000463908 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
LMNB1-204ENST00000463908 TRHP20396 242 aaPredicted RBP31.15■■■□□ 2.58
LMNB1-204ENST00000463908 CTTNBP2Q8WZ74 1663 aa31.13■■■□□ 2.57
LMNB1-204ENST00000463908 UGGT2Q9NYU1 1516 aa31.1■■■□□ 2.57
LMNB1-204ENST00000463908 GOLGA3Q08378 1498 aa31.09■■■□□ 2.57
LMNB1-204ENST00000463908 UBTFP17480 764 aaKnown RBP31.08■■■□□ 2.57
LMNB1-204ENST00000463908 DISP1Q96F81 1524 aa31.06■■■□□ 2.56
LMNB1-204ENST00000463908 CARMIL2Q6F5E8 1435 aa31.03■■■□□ 2.56
LMNB1-204ENST00000463908 TNIKQ9UKE5 1360 aa30.95■■■□□ 2.55
LMNB1-204ENST00000463908 RANGAP1P46060 587 aaPredicted RBP30.95■■■□□ 2.55
LMNB1-204ENST00000463908 PTPRGP23470 1445 aa30.93■■■□□ 2.54
LMNB1-204ENST00000463908 KIAA0556O60303 1618 aa30.91■■■□□ 2.54
LMNB1-204ENST00000463908 TTBK1Q5TCY1 1321 aaPredicted RBP30.91■■■□□ 2.54
LMNB1-204ENST00000463908 P3H3Q8IVL6 736 aa30.9■■■□□ 2.54
LMNB1-204ENST00000463908 LOC105371045A0A1W2PR82 267 aa30.87■■■□□ 2.53
LMNB1-204ENST00000463908 SAMD9Q5K651 1589 aa30.82■■■□□ 2.52
LMNB1-204ENST00000463908 FHOD3Q2V2M9 1422 aa30.71■■■□□ 2.51
LMNB1-204ENST00000463908 UACAQ9BZF9 1416 aa30.71■■■□□ 2.51
LMNB1-204ENST00000463908 ARHGAP35Q9NRY4 1499 aa30.7■■■□□ 2.51
LMNB1-204ENST00000463908 EFCAB5A4FU69 1503 aa30.7■■■□□ 2.51
LMNB1-204ENST00000463908 ADCY10Q96PN6 1610 aa30.69■■■□□ 2.5
LMNB1-204ENST00000463908 PLB1Q6P1J6 1458 aa30.67■■■□□ 2.5
LMNB1-204ENST00000463908 UHRF1BP1LA0JNW5 1464 aa30.65■■■□□ 2.5
LMNB1-204ENST00000463908 NPM1P06748 294 aaKnown RBP eCLIP30.61■■■□□ 2.49
LMNB1-204ENST00000463908 ABCC2Q92887 1545 aa30.61■■■□□ 2.49
LMNB1-204ENST00000463908 ABCA8O94911 1581 aa30.61■■■□□ 2.49
LMNB1-204ENST00000463908 CLIP1P30622 1438 aa30.58■■■□□ 2.49
LMNB1-204ENST00000463908 AEBP2Q6ZN18 517 aaPredicted RBP30.52■■■□□ 2.48
LMNB1-204ENST00000463908 KDM5BQ9UGL1 1544 aa30.52■■■□□ 2.48
LMNB1-204ENST00000463908 CEP162Q5TB80 1403 aa30.51■■■□□ 2.47
LMNB1-204ENST00000463908 KIF13AQ9H1H9 1805 aa30.5■■■□□ 2.47
LMNB1-204ENST00000463908 RAPGEF6Q8TEU7 1601 aa30.46■■■□□ 2.47
LMNB1-204ENST00000463908 FMN1Q68DA7 1419 aa30.46■■■□□ 2.47
LMNB1-204ENST00000463908 ARID3CA6NKF2 412 aa30.45■■■□□ 2.47
LMNB1-204ENST00000463908 MAPKBP1O60336 1514 aa30.43■■■□□ 2.46
LMNB1-204ENST00000463908 ATP10BO94823 1461 aa30.43■■■□□ 2.46
LMNB1-204ENST00000463908 NUP153P49790 1475 aaKnown RBP30.42■■■□□ 2.46
LMNB1-204ENST00000463908 ZCCHC11Q5TAX3 1644 aaKnown RBP30.4■■■□□ 2.46
LMNB1-204ENST00000463908 ASXL2Q76L83 1435 aa30.37■■■□□ 2.45
LMNB1-204ENST00000463908 ATP1B4Q9UN42 357 aaPredicted RBP30.34■■■□□ 2.45
LMNB1-204ENST00000463908 ABCC10Q5T3U5 1492 aa30.3■■■□□ 2.44
LMNB1-204ENST00000463908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.29■■■□□ 2.44
LMNB1-204ENST00000463908 HNRNPUL2Q1KMD3 747 aaKnown RBP30.29■■■□□ 2.44
LMNB1-204ENST00000463908 CASKIN1Q8WXD9 1431 aa30.29■■■□□ 2.44
LMNB1-204ENST00000463908 FAM69CQ0P6D2 419 aa30.28■■■□□ 2.44
LMNB1-204ENST00000463908 EPRSP07814 1512 aaKnown RBP30.23■■■□□ 2.43
LMNB1-204ENST00000463908 WDR7Q9Y4E6 1490 aa30.23■■■□□ 2.43
LMNB1-204ENST00000463908 PCF11O94913 1555 aaKnown RBP30.23■■■□□ 2.43
LMNB1-204ENST00000463908 HECW1Q76N89 1606 aa30.22■■■□□ 2.43
LMNB1-204ENST00000463908 CDK13Q14004 1512 aaKnown RBP30.22■■■□□ 2.43
LMNB1-204ENST00000463908 KCNH8Q96L42 1107 aa30.21■■■□□ 2.43
LMNB1-204ENST00000463908 DIP2BQ9P265 1576 aa30.2■■■□□ 2.43
LMNB1-204ENST00000463908 PLEKHD1A6NEE1 506 aa30.18■■■□□ 2.42
LMNB1-204ENST00000463908 FYCO1Q9BQS8 1478 aa30.18■■■□□ 2.42
LMNB1-204ENST00000463908 LRRIQ1Q96JM4 1722 aa30.15■■■□□ 2.42
LMNB1-204ENST00000463908 GLI2P10070 1586 aa30.12■■■□□ 2.41
LMNB1-204ENST00000463908 VPS8Q8N3P4 1428 aa30.12■■■□□ 2.41
LMNB1-204ENST00000463908 CDK11AQ9UQ88 783 aaPredicted RBP30.07■■■□□ 2.4
LMNB1-204ENST00000463908 CCDC18Q5T9S5 1454 aa30.06■■■□□ 2.4
LMNB1-204ENST00000463908 TSPOAP1O95153 1857 aa30.01■■■□□ 2.39
LMNB1-204ENST00000463908 TROQ12816 1431 aaPredicted RBP29.98■■■□□ 2.39
LMNB1-204ENST00000463908 MAGI3Q5TCQ9 1506 aa29.98■■■□□ 2.39
LMNB1-204ENST00000463908 MAP3K4Q9Y6R4 1608 aa29.97■■■□□ 2.39
LMNB1-204ENST00000463908 CD109Q6YHK3 1445 aa29.96■■■□□ 2.39
LMNB1-204ENST00000463908 KDM6BO15054 1643 aa29.94■■■□□ 2.38
LMNB1-204ENST00000463908 ABCA9Q8IUA7 1624 aa29.93■■■□□ 2.38
LMNB1-204ENST00000463908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.91■■■□□ 2.381e-6■■□□□ 11.4
LMNB1-204ENST00000463908 PPRC1Q5VV67 1664 aaKnown RBP29.9■■■□□ 2.38
LMNB1-204ENST00000463908 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
LMNB1-204ENST00000463908 KIF14Q15058 1648 aa29.87■■■□□ 2.37
LMNB1-204ENST00000463908 TIAM1Q13009 1591 aa29.84■■■□□ 2.37
LMNB1-204ENST00000463908 TTC37Q6PGP7 1564 aa29.83■■■□□ 2.37
LMNB1-204ENST00000463908 MTUS2Q5JR59 1369 aa29.83■■■□□ 2.37
LMNB1-204ENST00000463908 KANK4Q5T7N3 995 aaPredicted RBP29.83■■■□□ 2.37
LMNB1-204ENST00000463908 MAP3K1Q13233 1512 aa29.81■■■□□ 2.36
LMNB1-204ENST00000463908 TEX14Q8IWB6 1497 aa29.79■■■□□ 2.36
LMNB1-204ENST00000463908 PLCH2O75038 1416 aa29.77■■■□□ 2.36
LMNB1-204ENST00000463908 APLP2Q06481 763 aa29.76■■■□□ 2.35
LMNB1-204ENST00000463908 LRRC9Q6ZRR7 1453 aa29.75■■■□□ 2.35
LMNB1-204ENST00000463908 EHBP1L1Q8N3D4 1523 aa29.73■■■□□ 2.35
LMNB1-204ENST00000463908 COL17A1Q9UMD9 1497 aaPredicted RBP29.73■■■□□ 2.35
LMNB1-204ENST00000463908 KDM4FA0A1W2PPD8 638 aa29.67■■■□□ 2.34
LMNB1-204ENST00000463908 FANCAO15360 1455 aa29.67■■■□□ 2.34
LMNB1-204ENST00000463908 NEO1Q92859 1461 aa29.67■■■□□ 2.34
LMNB1-204ENST00000463908 GPATCH8Q9UKJ3 1502 aaKnown RBP29.66■■■□□ 2.34
LMNB1-204ENST00000463908 EFCAB2Q5VUJ9 269 aa29.66■■■□□ 2.34
LMNB1-204ENST00000463908 PHLDB1Q86UU1 1377 aa29.65■■■□□ 2.34
LMNB1-204ENST00000463908 MYO5CQ9NQX4 1742 aa29.64■■■□□ 2.34
LMNB1-204ENST00000463908 ARAP3Q8WWN8 1544 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms