RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
PTPRD-207ENST00000463477 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
PTPRD-207ENST00000463477 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.14
PTPRD-207ENST00000463477 SHROOM2Q13796 1616 aa15.93■□□□□ 0.14
PTPRD-207ENST00000463477 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
PTPRD-207ENST00000463477 PRG4Q92954 1404 aaPredicted RBP15.92■□□□□ 0.14
PTPRD-207ENST00000463477 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
PTPRD-207ENST00000463477 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
PTPRD-207ENST00000463477 EEA1Q15075 1411 aa15.9■□□□□ 0.14
PTPRD-207ENST00000463477 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
PTPRD-207ENST00000463477 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
PTPRD-207ENST00000463477 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
PTPRD-207ENST00000463477 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
PTPRD-207ENST00000463477 UGGT2Q9NYU1 1516 aa15.76■□□□□ 0.11
PTPRD-207ENST00000463477 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
PTPRD-207ENST00000463477 PTPRGP23470 1445 aa15.75■□□□□ 0.11
PTPRD-207ENST00000463477 DISP1Q96F81 1524 aa15.74■□□□□ 0.11
PTPRD-207ENST00000463477 HRCP23327 699 aa15.72■□□□□ 0.11
PTPRD-207ENST00000463477 CTTNBP2Q8WZ74 1663 aa15.7■□□□□ 0.1
PTPRD-207ENST00000463477 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
PTPRD-207ENST00000463477 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
PTPRD-207ENST00000463477 NPM1P06748 294 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPRD-207ENST00000463477 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
PTPRD-207ENST00000463477 KIF21BO75037 1637 aa15.68■□□□□ 0.1
PTPRD-207ENST00000463477 TTBK1Q5TCY1 1321 aaPredicted RBP15.67■□□□□ 0.1
PTPRD-207ENST00000463477 TRIM26Q12899 539 aaPredicted RBP15.66■□□□□ 0.1
PTPRD-207ENST00000463477 KIAA0556O60303 1618 aa15.65■□□□□ 0.1
PTPRD-207ENST00000463477 UACAQ9BZF9 1416 aa15.63■□□□□ 0.09
PTPRD-207ENST00000463477 UBTFP17480 764 aaKnown RBP15.63■□□□□ 0.09
PTPRD-207ENST00000463477 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
PTPRD-207ENST00000463477 UHRF1BP1LA0JNW5 1464 aa15.61■□□□□ 0.09
PTPRD-207ENST00000463477 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
PTPRD-207ENST00000463477 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
PTPRD-207ENST00000463477 ABCC2Q92887 1545 aa15.58■□□□□ 0.08
PTPRD-207ENST00000463477 MAPKBP1O60336 1514 aa15.56■□□□□ 0.08
PTPRD-207ENST00000463477 RANGAP1P46060 587 aaPredicted RBP15.56■□□□□ 0.08
PTPRD-207ENST00000463477 SAMD9Q5K651 1589 aa15.55■□□□□ 0.08
PTPRD-207ENST00000463477 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
PTPRD-207ENST00000463477 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
PTPRD-207ENST00000463477 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.07
PTPRD-207ENST00000463477 FAM69CQ0P6D2 419 aa15.51■□□□□ 0.07
PTPRD-207ENST00000463477 ABCA8O94911 1581 aa15.5■□□□□ 0.07
PTPRD-207ENST00000463477 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
PTPRD-207ENST00000463477 ASXL2Q76L83 1435 aa15.49■□□□□ 0.07
PTPRD-207ENST00000463477 FHOD3Q2V2M9 1422 aa15.48■□□□□ 0.07
PTPRD-207ENST00000463477 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
PTPRD-207ENST00000463477 DIP2BQ9P265 1576 aa15.43■□□□□ 0.06
PTPRD-207ENST00000463477 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
PTPRD-207ENST00000463477 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
PTPRD-207ENST00000463477 ATP10BO94823 1461 aa15.42■□□□□ 0.06
PTPRD-207ENST00000463477 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
PTPRD-207ENST00000463477 RAPGEF6Q8TEU7 1601 aa15.4■□□□□ 0.06
PTPRD-207ENST00000463477 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
PTPRD-207ENST00000463477 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
PTPRD-207ENST00000463477 EPRSP07814 1512 aaKnown RBP15.39■□□□□ 0.05
PTPRD-207ENST00000463477 GLI2P10070 1586 aa15.38■□□□□ 0.05
PTPRD-207ENST00000463477 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
PTPRD-207ENST00000463477 NUP153P49790 1475 aaKnown RBP15.38■□□□□ 0.05
PTPRD-207ENST00000463477 KCNH8Q96L42 1107 aa15.37■□□□□ 0.05
PTPRD-207ENST00000463477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.36■□□□□ 0.05
PTPRD-207ENST00000463477 HNRNPUL2Q1KMD3 747 aaKnown RBP15.36■□□□□ 0.05
PTPRD-207ENST00000463477 CLIP1P30622 1438 aa15.34■□□□□ 0.05
PTPRD-207ENST00000463477 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
PTPRD-207ENST00000463477 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
PTPRD-207ENST00000463477 ATP1B4Q9UN42 357 aaPredicted RBP15.31■□□□□ 0.04
PTPRD-207ENST00000463477 CD109Q6YHK3 1445 aa15.28■□□□□ 0.04
PTPRD-207ENST00000463477 MAP3K4Q9Y6R4 1608 aa15.28■□□□□ 0.04
PTPRD-207ENST00000463477 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
PTPRD-207ENST00000463477 CASKIN1Q8WXD9 1431 aa15.27■□□□□ 0.03
PTPRD-207ENST00000463477 TSPOAP1O95153 1857 aa15.26■□□□□ 0.03
PTPRD-207ENST00000463477 MAGI3Q5TCQ9 1506 aa15.25■□□□□ 0.03
PTPRD-207ENST00000463477 HECW1Q76N89 1606 aa15.25■□□□□ 0.03
PTPRD-207ENST00000463477 TEX14Q8IWB6 1497 aa15.25■□□□□ 0.03
PTPRD-207ENST00000463477 CDK13Q14004 1512 aaKnown RBP15.24■□□□□ 0.03
PTPRD-207ENST00000463477 PPRC1Q5VV67 1664 aaKnown RBP15.23■□□□□ 0.03
PTPRD-207ENST00000463477 CFAP43Q8NDM7 1665 aa15.23■□□□□ 0.03
PTPRD-207ENST00000463477 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
PTPRD-207ENST00000463477 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
PTPRD-207ENST00000463477 CCDC18Q5T9S5 1454 aa15.19■□□□□ 0.02
PTPRD-207ENST00000463477 PHLDB1Q86UU1 1377 aa15.18■□□□□ 0.02
PTPRD-207ENST00000463477 KDM6BO15054 1643 aa15.18■□□□□ 0.02
PTPRD-207ENST00000463477 COL17A1Q9UMD9 1497 aaPredicted RBP15.17■□□□□ 0.02
PTPRD-207ENST00000463477 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
PTPRD-207ENST00000463477 PPARGC1BQ86YN6 1023 aaKnown RBP15.17■□□□□ 0.02
PTPRD-207ENST00000463477 TROQ12816 1431 aaPredicted RBP15.17■□□□□ 0.02
PTPRD-207ENST00000463477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTPRD-207ENST00000463477 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
PTPRD-207ENST00000463477 NEO1Q92859 1461 aa15.13■□□□□ 0.01
PTPRD-207ENST00000463477 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
PTPRD-207ENST00000463477 PLCH2O75038 1416 aa15.11■□□□□ 0.01
PTPRD-207ENST00000463477 VPS8Q8N3P4 1428 aa15.11■□□□□ 0.01
PTPRD-207ENST00000463477 TTC37Q6PGP7 1564 aa15.08■□□□□ 0.01
PTPRD-207ENST00000463477 EFCAB2Q5VUJ9 269 aa15.08■□□□□ 0
PTPRD-207ENST00000463477 FANCAO15360 1455 aa15.07■□□□□ 0
PTPRD-207ENST00000463477 AKNAQ7Z591 1439 aa15.07■□□□□ 0
PTPRD-207ENST00000463477 KIF14Q15058 1648 aa15.07■□□□□ 0
PTPRD-207ENST00000463477 RAPGEF3O95398 923 aa15.06■□□□□ 0
PTPRD-207ENST00000463477 MTUS2Q5JR59 1369 aa15.05■□□□□ -0
PTPRD-207ENST00000463477 DENND4BO75064 1496 aaPredicted RBP15.02□□□□□ -0.01
PTPRD-207ENST00000463477 CFAP74Q9C0B2 1584 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms