RNA–Protein interactions for RNA: ENST00000463009.1

ARPC1A-203, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-203ENST00000463009 EEA1Q15075 1411 aa18.22■□□□□ 0.51
ARPC1A-203ENST00000463009 CARMIL1Q5VZK9 1371 aa18.2■□□□□ 0.5
ARPC1A-203ENST00000463009 FAM9AQ8IZU1 332 aaPredicted RBP18.2■□□□□ 0.5
ARPC1A-203ENST00000463009 CLASP1Q7Z460 1538 aa18.13■□□□□ 0.49
ARPC1A-203ENST00000463009 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
ARPC1A-203ENST00000463009 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
ARPC1A-203ENST00000463009 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
ARPC1A-203ENST00000463009 NUP160Q12769 1436 aa18.12■□□□□ 0.49
ARPC1A-203ENST00000463009 PRXQ9BXM0 1461 aa18.09■□□□□ 0.49
ARPC1A-203ENST00000463009 KIF21BO75037 1637 aa18.01■□□□□ 0.47
ARPC1A-203ENST00000463009 FOXD1Q16676 465 aa18■□□□□ 0.47
ARPC1A-203ENST00000463009 KIAA0586Q9BVV6 1533 aa17.99■□□□□ 0.47
ARPC1A-203ENST00000463009 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
ARPC1A-203ENST00000463009 CTTNBP2Q8WZ74 1663 aa17.97■□□□□ 0.47
ARPC1A-203ENST00000463009 IQGAP2Q13576 1575 aa17.97■□□□□ 0.47
ARPC1A-203ENST00000463009 GOLGA3Q08378 1498 aa17.95■□□□□ 0.46
ARPC1A-203ENST00000463009 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
ARPC1A-203ENST00000463009 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
ARPC1A-203ENST00000463009 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
ARPC1A-203ENST00000463009 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
ARPC1A-203ENST00000463009 ERCC6L2Q5T890 1561 aa17.87■□□□□ 0.45
ARPC1A-203ENST00000463009 UGGT2Q9NYU1 1516 aa17.84■□□□□ 0.45
ARPC1A-203ENST00000463009 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
ARPC1A-203ENST00000463009 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
ARPC1A-203ENST00000463009 KIAA0556O60303 1618 aa17.8■□□□□ 0.44
ARPC1A-203ENST00000463009 DISP1Q96F81 1524 aa17.78■□□□□ 0.44
ARPC1A-203ENST00000463009 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
ARPC1A-203ENST00000463009 TNIKQ9UKE5 1360 aa17.75■□□□□ 0.43
ARPC1A-203ENST00000463009 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
ARPC1A-203ENST00000463009 KIF13AQ9H1H9 1805 aa17.74■□□□□ 0.43
ARPC1A-203ENST00000463009 SAMD9Q5K651 1589 aa17.73■□□□□ 0.43
ARPC1A-203ENST00000463009 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
ARPC1A-203ENST00000463009 P3H3Q8IVL6 736 aa17.71■□□□□ 0.43
ARPC1A-203ENST00000463009 PTPRGP23470 1445 aa17.71■□□□□ 0.43
ARPC1A-203ENST00000463009 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
ARPC1A-203ENST00000463009 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
ARPC1A-203ENST00000463009 ARHGAP35Q9NRY4 1499 aa17.63■□□□□ 0.41
ARPC1A-203ENST00000463009 CLIP1P30622 1438 aa17.63■□□□□ 0.41
ARPC1A-203ENST00000463009 KDM4FA0A1W2PPD8 638 aa17.62■□□□□ 0.41
ARPC1A-203ENST00000463009 FAM69CQ0P6D2 419 aa17.62■□□□□ 0.41
ARPC1A-203ENST00000463009 CEP162Q5TB80 1403 aa17.61■□□□□ 0.41
ARPC1A-203ENST00000463009 ABCC10Q5T3U5 1492 aa17.61■□□□□ 0.41
ARPC1A-203ENST00000463009 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
ARPC1A-203ENST00000463009 UACAQ9BZF9 1416 aa17.6■□□□□ 0.41
ARPC1A-203ENST00000463009 ADRA2BP18089 450 aa17.59■□□□□ 0.41
ARPC1A-203ENST00000463009 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
ARPC1A-203ENST00000463009 ABCC2Q92887 1545 aa17.58■□□□□ 0.41
ARPC1A-203ENST00000463009 PLB1Q6P1J6 1458 aa17.58■□□□□ 0.41
ARPC1A-203ENST00000463009 NPM1P06748 294 aaKnown RBP eCLIP17.57■□□□□ 0.4
ARPC1A-203ENST00000463009 KDM6BO15054 1643 aa17.56■□□□□ 0.4
ARPC1A-203ENST00000463009 ABCA8O94911 1581 aa17.56■□□□□ 0.4
ARPC1A-203ENST00000463009 UHRF1BP1LA0JNW5 1464 aa17.55■□□□□ 0.4
ARPC1A-203ENST00000463009 MAPKBP1O60336 1514 aa17.54■□□□□ 0.4
ARPC1A-203ENST00000463009 FMN1Q68DA7 1419 aa17.54■□□□□ 0.4
ARPC1A-203ENST00000463009 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
ARPC1A-203ENST00000463009 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
ARPC1A-203ENST00000463009 ARID3CA6NKF2 412 aa17.49■□□□□ 0.39
ARPC1A-203ENST00000463009 ZCCHC11Q5TAX3 1644 aaKnown RBP17.48■□□□□ 0.39
ARPC1A-203ENST00000463009 ATP1B4Q9UN42 357 aaPredicted RBP17.48■□□□□ 0.39
ARPC1A-203ENST00000463009 HECW1Q76N89 1606 aa17.47■□□□□ 0.39
ARPC1A-203ENST00000463009 KDM5BQ9UGL1 1544 aa17.47■□□□□ 0.39
ARPC1A-203ENST00000463009 PCF11O94913 1555 aaKnown RBP17.46■□□□□ 0.39
ARPC1A-203ENST00000463009 NUP153P49790 1475 aaKnown RBP17.45■□□□□ 0.38
ARPC1A-203ENST00000463009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
ARPC1A-203ENST00000463009 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
ARPC1A-203ENST00000463009 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
ARPC1A-203ENST00000463009 CASKIN1Q8WXD9 1431 aa17.41■□□□□ 0.38
ARPC1A-203ENST00000463009 FYCO1Q9BQS8 1478 aa17.41■□□□□ 0.38
ARPC1A-203ENST00000463009 ASXL2Q76L83 1435 aa17.4■□□□□ 0.38
ARPC1A-203ENST00000463009 ATP10BO94823 1461 aa17.39■□□□□ 0.37
ARPC1A-203ENST00000463009 CDK13Q14004 1512 aaKnown RBP17.39■□□□□ 0.37
ARPC1A-203ENST00000463009 EPRSP07814 1512 aaKnown RBP17.37■□□□□ 0.37
ARPC1A-203ENST00000463009 VPS8Q8N3P4 1428 aa17.37■□□□□ 0.37
ARPC1A-203ENST00000463009 ADGRL1O94910 1474 aa17.37■□□□□ 0.37
ARPC1A-203ENST00000463009 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
ARPC1A-203ENST00000463009 CCDC18Q5T9S5 1454 aa17.36■□□□□ 0.37
ARPC1A-203ENST00000463009 HECW2Q9P2P5 1572 aa17.32■□□□□ 0.36
ARPC1A-203ENST00000463009 LRRIQ1Q96JM4 1722 aa17.32■□□□□ 0.36
ARPC1A-203ENST00000463009 PLEKHD1A6NEE1 506 aa17.29■□□□□ 0.36
ARPC1A-203ENST00000463009 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
ARPC1A-203ENST00000463009 CDK11AQ9UQ88 783 aaPredicted RBP17.29■□□□□ 0.36
ARPC1A-203ENST00000463009 GLI2P10070 1586 aa17.24■□□□□ 0.35
ARPC1A-203ENST00000463009 CFAP43Q8NDM7 1665 aa17.24■□□□□ 0.35
ARPC1A-203ENST00000463009 TROQ12816 1431 aaPredicted RBP17.22■□□□□ 0.35
ARPC1A-203ENST00000463009 KIF14Q15058 1648 aa17.22■□□□□ 0.35
ARPC1A-203ENST00000463009 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
ARPC1A-203ENST00000463009 TIAM1Q13009 1591 aa17.21■□□□□ 0.35
ARPC1A-203ENST00000463009 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
ARPC1A-203ENST00000463009 APLP2Q06481 763 aa17.21■□□□□ 0.35
ARPC1A-203ENST00000463009 FBXO41Q8TF61 875 aa17.19■□□□□ 0.34
ARPC1A-203ENST00000463009 MAGI3Q5TCQ9 1506 aa17.19■□□□□ 0.34
ARPC1A-203ENST00000463009 EHBP1L1Q8N3D4 1523 aa17.19■□□□□ 0.34
ARPC1A-203ENST00000463009 MAP3K4Q9Y6R4 1608 aa17.18■□□□□ 0.34
ARPC1A-203ENST00000463009 ABCA9Q8IUA7 1624 aa17.18■□□□□ 0.34
ARPC1A-203ENST00000463009 TTC37Q6PGP7 1564 aa17.17■□□□□ 0.34
ARPC1A-203ENST00000463009 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
ARPC1A-203ENST00000463009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
ARPC1A-203ENST00000463009 COL17A1Q9UMD9 1497 aaPredicted RBP17.15■□□□□ 0.34
ARPC1A-203ENST00000463009 TEX14Q8IWB6 1497 aa17.14■□□□□ 0.33
ARPC1A-203ENST00000463009 MAP3K1Q13233 1512 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms