RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 HRCP23327 699 aa9.75□□□□□ -0.85
CLK1-207ENST00000461981 KIAA0586Q9BVV6 1533 aa9.75□□□□□ -0.85
CLK1-207ENST00000461981 DIP2BQ9P265 1576 aa9.74□□□□□ -0.85
CLK1-207ENST00000461981 CYB5RLQ6IPT4 315 aa9.74□□□□□ -0.85
CLK1-207ENST00000461981 ADCY10Q96PN6 1610 aa9.68□□□□□ -0.86
CLK1-207ENST00000461981 PLB1Q6P1J6 1458 aa9.67□□□□□ -0.86
CLK1-207ENST00000461981 ERCC6L2Q5T890 1561 aa9.67□□□□□ -0.86
CLK1-207ENST00000461981 PPARGC1BQ86YN6 1023 aaKnown RBP9.67□□□□□ -0.86
CLK1-207ENST00000461981 UGGT2Q9NYU1 1516 aa9.66□□□□□ -0.86
CLK1-207ENST00000461981 PRG4Q92954 1404 aaPredicted RBP9.65□□□□□ -0.86
CLK1-207ENST00000461981 KIF27Q86VH2 1401 aa9.65□□□□□ -0.86
CLK1-207ENST00000461981 KDM6BO15054 1643 aa9.63□□□□□ -0.87
CLK1-207ENST00000461981 MAP3K4Q9Y6R4 1608 aa9.63□□□□□ -0.87
CLK1-207ENST00000461981 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
CLK1-207ENST00000461981 CARMIL2Q6F5E8 1435 aa9.63□□□□□ -0.87
CLK1-207ENST00000461981 SCAF1Q9H7N4 1312 aaKnown RBP9.63□□□□□ -0.87
CLK1-207ENST00000461981 ABCC2Q92887 1545 aa9.62□□□□□ -0.87
CLK1-207ENST00000461981 TEX14Q8IWB6 1497 aa9.62□□□□□ -0.87
CLK1-207ENST00000461981 FBLN2P98095 1184 aa9.62□□□□□ -0.87
CLK1-207ENST00000461981 IQGAP2Q13576 1575 aa9.62□□□□□ -0.87
CLK1-207ENST00000461981 PPRC1Q5VV67 1664 aaKnown RBP9.61□□□□□ -0.87
CLK1-207ENST00000461981 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
CLK1-207ENST00000461981 KDM5BQ9UGL1 1544 aa9.6□□□□□ -0.87
CLK1-207ENST00000461981 TNIKQ9UKE5 1360 aa9.6□□□□□ -0.87
CLK1-207ENST00000461981 PHLDB1Q86UU1 1377 aa9.59□□□□□ -0.87
CLK1-207ENST00000461981 JPH4Q96JJ6 628 aa9.58□□□□□ -0.88
CLK1-207ENST00000461981 CTTNBP2Q8WZ74 1663 aa9.57□□□□□ -0.88
CLK1-207ENST00000461981 PRKCSHP14314 528 aaPredicted RBP9.57□□□□□ -0.88
CLK1-207ENST00000461981 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
CLK1-207ENST00000461981 IGF1RP08069 1367 aa9.56□□□□□ -0.88
CLK1-207ENST00000461981 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
CLK1-207ENST00000461981 AEBP2Q6ZN18 517 aaPredicted RBP9.56□□□□□ -0.88
CLK1-207ENST00000461981 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
CLK1-207ENST00000461981 KIAA0556O60303 1618 aa9.54□□□□□ -0.88
CLK1-207ENST00000461981 TTBK1Q5TCY1 1321 aaPredicted RBP9.54□□□□□ -0.88
CLK1-207ENST00000461981 UACAQ9BZF9 1416 aa9.53□□□□□ -0.88
CLK1-207ENST00000461981 ZCCHC11Q5TAX3 1644 aaKnown RBP9.51□□□□□ -0.89
CLK1-207ENST00000461981 ABCA8O94911 1581 aa9.51□□□□□ -0.89
CLK1-207ENST00000461981 PTPRGP23470 1445 aa9.51□□□□□ -0.89
CLK1-207ENST00000461981 EPRSP07814 1512 aaKnown RBP9.5□□□□□ -0.89
CLK1-207ENST00000461981 DISP1Q96F81 1524 aa9.5□□□□□ -0.89
CLK1-207ENST00000461981 RAPGEF2Q9Y4G8 1499 aa9.5□□□□□ -0.89
CLK1-207ENST00000461981 CARMIL1Q5VZK9 1371 aa9.5□□□□□ -0.89
CLK1-207ENST00000461981 CFAP74Q9C0B2 1584 aa9.49□□□□□ -0.89
CLK1-207ENST00000461981 ARAP3Q8WWN8 1544 aa9.48□□□□□ -0.89
CLK1-207ENST00000461981 ASXL2Q76L83 1435 aa9.47□□□□□ -0.89
CLK1-207ENST00000461981 WDR7Q9Y4E6 1490 aa9.46□□□□□ -0.9
CLK1-207ENST00000461981 ABCA9Q8IUA7 1624 aa9.45□□□□□ -0.9
CLK1-207ENST00000461981 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
CLK1-207ENST00000461981 NEO1Q92859 1461 aa9.43□□□□□ -0.9
CLK1-207ENST00000461981 EEA1Q15075 1411 aa9.43□□□□□ -0.9
CLK1-207ENST00000461981 SAMD9Q5K651 1589 aa9.43□□□□□ -0.9
CLK1-207ENST00000461981 FAM69CQ0P6D2 419 aa9.42□□□□□ -0.9
CLK1-207ENST00000461981 PRXQ9BXM0 1461 aa9.4□□□□□ -0.9
CLK1-207ENST00000461981 ADGRL1O94910 1474 aa9.4□□□□□ -0.9
CLK1-207ENST00000461981 ADAMTSL3P82987 1691 aa9.4□□□□□ -0.9
CLK1-207ENST00000461981 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
CLK1-207ENST00000461981 TSPOAP1O95153 1857 aa9.38□□□□□ -0.91
CLK1-207ENST00000461981 EFCAB5A4FU69 1503 aa9.37□□□□□ -0.91
CLK1-207ENST00000461981 PCGF6Q9BYE7 350 aa9.36□□□□□ -0.91
CLK1-207ENST00000461981 FAM9AQ8IZU1 332 aaPredicted RBP9.36□□□□□ -0.91
CLK1-207ENST00000461981 MAGI2Q86UL8 1455 aa9.35□□□□□ -0.91
CLK1-207ENST00000461981 REREQ9P2R6 1566 aa9.34□□□□□ -0.91
CLK1-207ENST00000461981 ARHGEF40Q8TER5 1519 aa9.34□□□□□ -0.91
CLK1-207ENST00000461981 RAPGEF6Q8TEU7 1601 aa9.34□□□□□ -0.91
CLK1-207ENST00000461981 BCORL1Q5H9F3 1711 aa9.33□□□□□ -0.92
CLK1-207ENST00000461981 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
CLK1-207ENST00000461981 HECW2Q9P2P5 1572 aa9.32□□□□□ -0.92
CLK1-207ENST00000461981 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
CLK1-207ENST00000461981 KIF21BO75037 1637 aa9.3□□□□□ -0.92
CLK1-207ENST00000461981 FHOD3Q2V2M9 1422 aa9.3□□□□□ -0.92
CLK1-207ENST00000461981 RICTORQ6R327 1708 aa9.29□□□□□ -0.92
CLK1-207ENST00000461981 FRMPD1Q5SYB0 1578 aa9.28□□□□□ -0.92
CLK1-207ENST00000461981 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
CLK1-207ENST00000461981 IQSEC2Q5JU85 1478 aa9.27□□□□□ -0.93
CLK1-207ENST00000461981 TTC37Q6PGP7 1564 aa9.26□□□□□ -0.93
CLK1-207ENST00000461981 ATP10BO94823 1461 aa9.25□□□□□ -0.93
CLK1-207ENST00000461981 POGZQ7Z3K3 1410 aa9.24□□□□□ -0.93
CLK1-207ENST00000461981 FAM135AQ9P2D6 1515 aa9.24□□□□□ -0.93
CLK1-207ENST00000461981 FANCAO15360 1455 aa9.24□□□□□ -0.93
CLK1-207ENST00000461981 PCF11O94913 1555 aaKnown RBP9.23□□□□□ -0.93
CLK1-207ENST00000461981 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
CLK1-207ENST00000461981 SUPT5HO00267 1087 aaKnown RBP9.21□□□□□ -0.93
CLK1-207ENST00000461981 AGLP35573 1532 aa9.21□□□□□ -0.94
CLK1-207ENST00000461981 AKNAQ7Z591 1439 aa9.21□□□□□ -0.94
CLK1-207ENST00000461981 HECW1Q76N89 1606 aa9.21□□□□□ -0.94
CLK1-207ENST00000461981 PTPRMP28827 1452 aa9.2□□□□□ -0.94
CLK1-207ENST00000461981 MROH2AA6NES4 1674 aa9.2□□□□□ -0.94
CLK1-207ENST00000461981 ARHGEF12Q9NZN5 1544 aa9.2□□□□□ -0.94
CLK1-207ENST00000461981 DENND4BO75064 1496 aaPredicted RBP9.2□□□□□ -0.94
CLK1-207ENST00000461981 PREX1Q8TCU6 1659 aa9.2□□□□□ -0.94
CLK1-207ENST00000461981 ZFYVE16Q7Z3T8 1539 aa9.19□□□□□ -0.94
CLK1-207ENST00000461981 KDM5CP41229 1560 aa9.19□□□□□ -0.94
CLK1-207ENST00000461981 MYO5CQ9NQX4 1742 aa9.19□□□□□ -0.94
CLK1-207ENST00000461981 GTF3C3Q9Y5Q9 886 aa9.18□□□□□ -0.94
CLK1-207ENST00000461981 NUP153P49790 1475 aaKnown RBP9.18□□□□□ -0.94
CLK1-207ENST00000461981 CENPBP07199 599 aaPredicted RBP9.17□□□□□ -0.94
CLK1-207ENST00000461981 MADDQ8WXG6 1647 aa9.16□□□□□ -0.94
CLK1-207ENST00000461981 APLP2Q06481 763 aa9.16□□□□□ -0.94
CLK1-207ENST00000461981 ACIN1Q9UKV3 1341 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms