RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PRG4Q92954 1404 aaPredicted RBP26.07■■□□□ 1.76
DNMT3A-207ENST00000461228 ADCY10Q96PN6 1610 aa25.98■■□□□ 1.75
DNMT3A-207ENST00000461228 KIAA0586Q9BVV6 1533 aa25.98■■□□□ 1.75
DNMT3A-207ENST00000461228 DIP2BQ9P265 1576 aa25.97■■□□□ 1.75
DNMT3A-207ENST00000461228 ABCC10Q5T3U5 1492 aa25.96■■□□□ 1.75
DNMT3A-207ENST00000461228 JPH4Q96JJ6 628 aa25.93■■□□□ 1.74
DNMT3A-207ENST00000461228 KIF27Q86VH2 1401 aa25.92■■□□□ 1.74
DNMT3A-207ENST00000461228 AEBP2Q6ZN18 517 aaPredicted RBP25.84■■□□□ 1.73
DNMT3A-207ENST00000461228 IGF1RP08069 1367 aa25.83■■□□□ 1.73
DNMT3A-207ENST00000461228 IQGAP2Q13576 1575 aa25.76■■□□□ 1.71
DNMT3A-207ENST00000461228 KDM6BO15054 1643 aa25.74■■□□□ 1.71
DNMT3A-207ENST00000461228 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
DNMT3A-207ENST00000461228 ABCC2Q92887 1545 aa25.69■■□□□ 1.7
DNMT3A-207ENST00000461228 UHRF1BP1LA0JNW5 1464 aa25.68■■□□□ 1.7
DNMT3A-207ENST00000461228 CARMIL2Q6F5E8 1435 aa25.68■■□□□ 1.7
DNMT3A-207ENST00000461228 GLI2P10070 1586 aa25.68■■□□□ 1.7
DNMT3A-207ENST00000461228 CARMIL1Q5VZK9 1371 aa25.66■■□□□ 1.7
DNMT3A-207ENST00000461228 FAM69CQ0P6D2 419 aa25.65■■□□□ 1.7
DNMT3A-207ENST00000461228 TNIKQ9UKE5 1360 aa25.63■■□□□ 1.69
DNMT3A-207ENST00000461228 PTPRGP23470 1445 aa25.62■■□□□ 1.69
DNMT3A-207ENST00000461228 PPRC1Q5VV67 1664 aaKnown RBP25.61■■□□□ 1.69
DNMT3A-207ENST00000461228 TSPOAP1O95153 1857 aa25.6■■□□□ 1.69
DNMT3A-207ENST00000461228 UGGT2Q9NYU1 1516 aa25.6■■□□□ 1.69
DNMT3A-207ENST00000461228 PLB1Q6P1J6 1458 aa25.6■■□□□ 1.69
DNMT3A-207ENST00000461228 DISP1Q96F81 1524 aa25.58■■□□□ 1.68
DNMT3A-207ENST00000461228 KIAA0556O60303 1618 aa25.54■■□□□ 1.68
DNMT3A-207ENST00000461228 KDM5BQ9UGL1 1544 aa25.53■■□□□ 1.68
DNMT3A-207ENST00000461228 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
DNMT3A-207ENST00000461228 CTTNBP2Q8WZ74 1663 aa25.52■■□□□ 1.68
DNMT3A-207ENST00000461228 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
DNMT3A-207ENST00000461228 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
DNMT3A-207ENST00000461228 UACAQ9BZF9 1416 aa25.5■■□□□ 1.67
DNMT3A-207ENST00000461228 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
DNMT3A-207ENST00000461228 EPRSP07814 1512 aaKnown RBP25.42■■□□□ 1.66
DNMT3A-207ENST00000461228 TEX14Q8IWB6 1497 aa25.41■■□□□ 1.66
DNMT3A-207ENST00000461228 GOLGA3Q08378 1498 aa25.34■■□□□ 1.65
DNMT3A-207ENST00000461228 CFAP43Q8NDM7 1665 aa25.33■■□□□ 1.65
DNMT3A-207ENST00000461228 WDR7Q9Y4E6 1490 aa25.33■■□□□ 1.65
DNMT3A-207ENST00000461228 ABCA8O94911 1581 aa25.3■■□□□ 1.64
DNMT3A-207ENST00000461228 KDM4FA0A1W2PPD8 638 aa25.29■■□□□ 1.64
DNMT3A-207ENST00000461228 PRXQ9BXM0 1461 aa25.25■■□□□ 1.63
DNMT3A-207ENST00000461228 MAGI3Q5TCQ9 1506 aa25.24■■□□□ 1.63
DNMT3A-207ENST00000461228 ADGRL1O94910 1474 aa25.24■■□□□ 1.63
DNMT3A-207ENST00000461228 COL17A1Q9UMD9 1497 aaPredicted RBP25.21■■□□□ 1.63
DNMT3A-207ENST00000461228 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
DNMT3A-207ENST00000461228 SAMD9Q5K651 1589 aa25.11■■□□□ 1.61
DNMT3A-207ENST00000461228 ABCA9Q8IUA7 1624 aa25.07■■□□□ 1.6
DNMT3A-207ENST00000461228 CD109Q6YHK3 1445 aa25.06■■□□□ 1.6
DNMT3A-207ENST00000461228 ARAP3Q8WWN8 1544 aa25.05■■□□□ 1.6
DNMT3A-207ENST00000461228 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
DNMT3A-207ENST00000461228 RAPGEF6Q8TEU7 1601 aa24.98■■□□□ 1.59
DNMT3A-207ENST00000461228 PHLDB1Q86UU1 1377 aa24.97■■□□□ 1.59
DNMT3A-207ENST00000461228 KIF21BO75037 1637 aa24.96■■□□□ 1.59
DNMT3A-207ENST00000461228 EEA1Q15075 1411 aa24.93■■□□□ 1.58
DNMT3A-207ENST00000461228 ATP10BO94823 1461 aa24.92■■□□□ 1.58
DNMT3A-207ENST00000461228 NEO1Q92859 1461 aa24.91■■□□□ 1.58
DNMT3A-207ENST00000461228 FAM9AQ8IZU1 332 aaPredicted RBP24.85■■□□□ 1.57
DNMT3A-207ENST00000461228 ADAMTSL3P82987 1691 aa24.85■■□□□ 1.57
DNMT3A-207ENST00000461228 FRMPD1Q5SYB0 1578 aa24.84■■□□□ 1.57
DNMT3A-207ENST00000461228 CFAP74Q9C0B2 1584 aa24.84■■□□□ 1.57
DNMT3A-207ENST00000461228 EFCAB5A4FU69 1503 aa24.84■■□□□ 1.57
DNMT3A-207ENST00000461228 NUP153P49790 1475 aaKnown RBP24.83■■□□□ 1.56
DNMT3A-207ENST00000461228 ARHGEF40Q8TER5 1519 aa24.8■■□□□ 1.56
DNMT3A-207ENST00000461228 BCORL1Q5H9F3 1711 aa24.77■■□□□ 1.56
DNMT3A-207ENST00000461228 RICTORQ6R327 1708 aa24.77■■□□□ 1.56
DNMT3A-207ENST00000461228 KCNH8Q96L42 1107 aa24.75■■□□□ 1.55
DNMT3A-207ENST00000461228 ZMYM4Q5VZL5 1548 aa24.73■■□□□ 1.55
DNMT3A-207ENST00000461228 CSRNP3Q8WYN3 585 aa24.73■■□□□ 1.55
DNMT3A-207ENST00000461228 PTPRMP28827 1452 aa24.69■■□□□ 1.54
DNMT3A-207ENST00000461228 MADDQ8WXG6 1647 aa24.66■■□□□ 1.54
DNMT3A-207ENST00000461228 ILDR1Q86SU0 546 aaPredicted RBP24.66■■□□□ 1.54
DNMT3A-207ENST00000461228 FHOD3Q2V2M9 1422 aa24.65■■□□□ 1.54
DNMT3A-207ENST00000461228 TTC37Q6PGP7 1564 aa24.65■■□□□ 1.54
DNMT3A-207ENST00000461228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.64■■□□□ 1.53
DNMT3A-207ENST00000461228 PCF11O94913 1555 aaKnown RBP24.62■■□□□ 1.53
DNMT3A-207ENST00000461228 FANCAO15360 1455 aa24.61■■□□□ 1.53
DNMT3A-207ENST00000461228 DENND4BO75064 1496 aaPredicted RBP24.61■■□□□ 1.53
DNMT3A-207ENST00000461228 MAGI2Q86UL8 1455 aa24.59■■□□□ 1.53
DNMT3A-207ENST00000461228 P3H3Q8IVL6 736 aa24.57■■□□□ 1.52
DNMT3A-207ENST00000461228 HECW1Q76N89 1606 aa24.57■■□□□ 1.52
DNMT3A-207ENST00000461228 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
DNMT3A-207ENST00000461228 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
DNMT3A-207ENST00000461228 RIMS1Q86UR5 1692 aaKnown RBP24.54■■□□□ 1.52
DNMT3A-207ENST00000461228 LMTK3Q96Q04 1460 aa24.53■■□□□ 1.52
DNMT3A-207ENST00000461228 MYO5CQ9NQX4 1742 aa24.53■■□□□ 1.52
DNMT3A-207ENST00000461228 ARID3CA6NKF2 412 aa24.53■■□□□ 1.52
DNMT3A-207ENST00000461228 RAPGEF3O95398 923 aa24.52■■□□□ 1.52
DNMT3A-207ENST00000461228 FMN1Q68DA7 1419 aa24.49■■□□□ 1.51
DNMT3A-207ENST00000461228 POGZQ7Z3K3 1410 aa24.49■■□□□ 1.51
DNMT3A-207ENST00000461228 SIGLEC1Q9BZZ2 1709 aa24.49■■□□□ 1.51
DNMT3A-207ENST00000461228 PLEKHD1A6NEE1 506 aa24.48■■□□□ 1.51
DNMT3A-207ENST00000461228 CDK13Q14004 1512 aaKnown RBP24.48■■□□□ 1.51
DNMT3A-207ENST00000461228 FER1L4A9Z1Z3 1794 aa24.47■■□□□ 1.51
DNMT3A-207ENST00000461228 KIF14Q15058 1648 aa24.45■■□□□ 1.5
DNMT3A-207ENST00000461228 PLCH2O75038 1416 aa24.44■■□□□ 1.5
DNMT3A-207ENST00000461228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.44■■□□□ 1.5
DNMT3A-207ENST00000461228 HNRNPUL2Q1KMD3 747 aaKnown RBP24.44■■□□□ 1.5
DNMT3A-207ENST00000461228 KDM5CP41229 1560 aa24.42■■□□□ 1.5
DNMT3A-207ENST00000461228 REREQ9P2R6 1566 aa24.4■■□□□ 1.5
DNMT3A-207ENST00000461228 ARHGEF12Q9NZN5 1544 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms