RNA–Protein interactions for RNA: ENST00000460047.5

TNIK-206, Transcript of TRAF2 and NCK interacting kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNIK, Length 3,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-206ENST00000460047 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
TNIK-206ENST00000460047 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
TNIK-206ENST00000460047 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
TNIK-206ENST00000460047 GAPVD1Q14C86 1478 aa16.56■□□□□ 0.24
TNIK-206ENST00000460047 CHMP7Q8WUX9 453 aaPredicted RBP16.56■□□□□ 0.24
TNIK-206ENST00000460047 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
TNIK-206ENST00000460047 CCNB3Q8WWL7 1395 aa16.55■□□□□ 0.24
TNIK-206ENST00000460047 AQRO60306 1485 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■■■■■ 33.8
TNIK-206ENST00000460047 ZNF316A6NFI3 1004 aaPredicted RBP16.55■□□□□ 0.24
TNIK-206ENST00000460047 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
TNIK-206ENST00000460047 LAMC3Q9Y6N6 1575 aa16.53■□□□□ 0.24
TNIK-206ENST00000460047 GTF3C3Q9Y5Q9 886 aa16.53■□□□□ 0.24
TNIK-206ENST00000460047 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
TNIK-206ENST00000460047 CHIC2Q9UKJ5 165 aa16.49■□□□□ 0.23
TNIK-206ENST00000460047 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
TNIK-206ENST00000460047 TRIM52Q96A61 297 aa16.44■□□□□ 0.22
TNIK-206ENST00000460047 ZNF777Q9ULD5 760 aaPredicted RBP16.4■□□□□ 0.22
TNIK-206ENST00000460047 PHLDB1Q86UU1 1377 aa16.4■□□□□ 0.22
TNIK-206ENST00000460047 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
TNIK-206ENST00000460047 MRC2Q9UBG0 1479 aa16.39■□□□□ 0.21
TNIK-206ENST00000460047 RRP7BPQ9NSQ0 103 aa16.38■□□□□ 0.21
TNIK-206ENST00000460047 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
TNIK-206ENST00000460047 KIF21AQ7Z4S6 1674 aa16.36■□□□□ 0.21
TNIK-206ENST00000460047 RAB3GAP2Q9H2M9 1393 aa16.36■□□□□ 0.21
TNIK-206ENST00000460047 LRRC9Q6ZRR7 1453 aa16.35■□□□□ 0.21
TNIK-206ENST00000460047 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
TNIK-206ENST00000460047 DHX57Q6P158 1386 aaKnown RBP16.34■□□□□ 0.21
TNIK-206ENST00000460047 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.21
TNIK-206ENST00000460047 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
TNIK-206ENST00000460047 RRBP1Q9P2E9 1410 aaKnown RBP16.3■□□□□ 0.2
TNIK-206ENST00000460047 TIAM1Q13009 1591 aa16.29■□□□□ 0.2
TNIK-206ENST00000460047 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
TNIK-206ENST00000460047 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
TNIK-206ENST00000460047 PCF11O94913 1555 aaKnown RBP16.29■□□□□ 0.2
TNIK-206ENST00000460047 MIER1Q8N108 512 aa16.28■□□□□ 0.2
TNIK-206ENST00000460047 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
TNIK-206ENST00000460047 SETD5Q9C0A6 1442 aa16.28■□□□□ 0.2
TNIK-206ENST00000460047 CUL7Q14999 1698 aa16.27■□□□□ 0.2
TNIK-206ENST00000460047 IFT140Q96RY7 1462 aa16.24■□□□□ 0.19
TNIK-206ENST00000460047 JPH4Q96JJ6 628 aa16.23■□□□□ 0.19
TNIK-206ENST00000460047 SNAPC4Q5SXM2 1469 aa16.23■□□□□ 0.19
TNIK-206ENST00000460047 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
TNIK-206ENST00000460047 EFCAB5A4FU69 1503 aa16.23■□□□□ 0.19
TNIK-206ENST00000460047 CLSPNQ9HAW4 1339 aa16.21■□□□□ 0.19
TNIK-206ENST00000460047 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
TNIK-206ENST00000460047 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
TNIK-206ENST00000460047 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
TNIK-206ENST00000460047 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
TNIK-206ENST00000460047 ABCA5Q8WWZ7 1642 aa16.16■□□□□ 0.18
TNIK-206ENST00000460047 NCOA2Q15596 1464 aa16.15■□□□□ 0.18
TNIK-206ENST00000460047 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.17
TNIK-206ENST00000460047 FOXD1Q16676 465 aa16.14■□□□□ 0.17
TNIK-206ENST00000460047 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
TNIK-206ENST00000460047 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
TNIK-206ENST00000460047 KCNH8Q96L42 1107 aa16.13■□□□□ 0.17
TNIK-206ENST00000460047 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
TNIK-206ENST00000460047 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
TNIK-206ENST00000460047 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
TNIK-206ENST00000460047 CTTNBP2Q8WZ74 1663 aa16.11■□□□□ 0.17
TNIK-206ENST00000460047 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
TNIK-206ENST00000460047 CDK13Q14004 1512 aaKnown RBP16.11■□□□□ 0.17
TNIK-206ENST00000460047 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
TNIK-206ENST00000460047 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
TNIK-206ENST00000460047 MYOM3Q5VTT5 1437 aa16.1■□□□□ 0.17
TNIK-206ENST00000460047 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
TNIK-206ENST00000460047 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
TNIK-206ENST00000460047 GRIN2AQ12879 1464 aa16.07■□□□□ 0.16
TNIK-206ENST00000460047 KIAA0586Q9BVV6 1533 aa16.06■□□□□ 0.16
TNIK-206ENST00000460047 ADAMTS12P58397 1594 aa16.04■□□□□ 0.16
TNIK-206ENST00000460047 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
TNIK-206ENST00000460047 EPRSP07814 1512 aaKnown RBP16.04■□□□□ 0.16
TNIK-206ENST00000460047 ERICH6Q7L0X2 663 aa16.04■□□□□ 0.16
TNIK-206ENST00000460047 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
TNIK-206ENST00000460047 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
TNIK-206ENST00000460047 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
TNIK-206ENST00000460047 WDR62O43379 1518 aa16.03■□□□□ 0.16
TNIK-206ENST00000460047 PBRM1Q86U86 1689 aa16.02■□□□□ 0.16
TNIK-206ENST00000460047 PRG4Q92954 1404 aaPredicted RBP16■□□□□ 0.15
TNIK-206ENST00000460047 PLB1Q6P1J6 1458 aa16■□□□□ 0.15
TNIK-206ENST00000460047 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
TNIK-206ENST00000460047 SYNJ2O15056 1496 aa15.99■□□□□ 0.15
TNIK-206ENST00000460047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.99■□□□□ 0.15
TNIK-206ENST00000460047 MPHOSPH9Q99550 1183 aa15.99■□□□□ 0.15
TNIK-206ENST00000460047 PTPRKQ15262 1439 aa15.99■□□□□ 0.15
TNIK-206ENST00000460047 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
TNIK-206ENST00000460047 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
TNIK-206ENST00000460047 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
TNIK-206ENST00000460047 CFAP43Q8NDM7 1665 aa15.97■□□□□ 0.15
TNIK-206ENST00000460047 PTPRGP23470 1445 aa15.97■□□□□ 0.15
TNIK-206ENST00000460047 HECW1Q76N89 1606 aa15.97■□□□□ 0.15
TNIK-206ENST00000460047 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.15
TNIK-206ENST00000460047 HNRNPMP52272 730 aaKnown RBP eCLIP15.96■□□□□ 0.151e-8■■■■□ 20.4
TNIK-206ENST00000460047 SAMD9Q5K651 1589 aa15.95■□□□□ 0.14
TNIK-206ENST00000460047 SUPT6HQ7KZ85 1726 aaKnown RBP15.94■□□□□ 0.14
TNIK-206ENST00000460047 THOC2Q8NI27 1593 aaKnown RBP15.94■□□□□ 0.14
TNIK-206ENST00000460047 ANP32CO43423 234 aa15.94■□□□□ 0.14
TNIK-206ENST00000460047 NAIPQ13075 1403 aa15.92■□□□□ 0.14
TNIK-206ENST00000460047 KDM2AQ9Y2K7 1162 aa15.91■□□□□ 0.14
TNIK-206ENST00000460047 HFM1A2PYH4 1435 aa15.91■□□□□ 0.14
TNIK-206ENST00000460047 MAGI3Q5TCQ9 1506 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms