RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
DDX39B-214ENST00000458640 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
DDX39B-214ENST00000458640 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
DDX39B-214ENST00000458640 CLIP1P30622 1438 aa16.75■□□□□ 0.27
DDX39B-214ENST00000458640 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
DDX39B-214ENST00000458640 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
DDX39B-214ENST00000458640 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
DDX39B-214ENST00000458640 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
DDX39B-214ENST00000458640 TSHZ2Q9NRE2 1034 aa16.63■□□□□ 0.25
DDX39B-214ENST00000458640 CTTNBP2Q8WZ74 1663 aa16.63■□□□□ 0.25
DDX39B-214ENST00000458640 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
DDX39B-214ENST00000458640 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
DDX39B-214ENST00000458640 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
DDX39B-214ENST00000458640 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
DDX39B-214ENST00000458640 EIF4G3O43432 1585 aaKnown RBP16.59■□□□□ 0.25
DDX39B-214ENST00000458640 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.25
DDX39B-214ENST00000458640 ADAMTS12P58397 1594 aa16.58■□□□□ 0.24
DDX39B-214ENST00000458640 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.247e-8■■■■□ 25.3
DDX39B-214ENST00000458640 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
DDX39B-214ENST00000458640 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
DDX39B-214ENST00000458640 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
DDX39B-214ENST00000458640 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
DDX39B-214ENST00000458640 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
DDX39B-214ENST00000458640 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
DDX39B-214ENST00000458640 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
DDX39B-214ENST00000458640 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
DDX39B-214ENST00000458640 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
DDX39B-214ENST00000458640 YTHDC1Q96MU7 727 aaKnown RBP16.43■□□□□ 0.22
DDX39B-214ENST00000458640 IQGAP2Q13576 1575 aa16.42■□□□□ 0.22
DDX39B-214ENST00000458640 SAMD9Q5K651 1589 aa16.42■□□□□ 0.22
DDX39B-214ENST00000458640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.41■□□□□ 0.22
DDX39B-214ENST00000458640 SYNJ2O15056 1496 aa16.4■□□□□ 0.22
DDX39B-214ENST00000458640 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
DDX39B-214ENST00000458640 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
DDX39B-214ENST00000458640 MIER1Q8N108 512 aa16.36■□□□□ 0.21
DDX39B-214ENST00000458640 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
DDX39B-214ENST00000458640 ERICH6BQ5W0A0 696 aa16.35■□□□□ 0.21
DDX39B-214ENST00000458640 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
DDX39B-214ENST00000458640 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
DDX39B-214ENST00000458640 KIAA0586Q9BVV6 1533 aa16.34■□□□□ 0.21
DDX39B-214ENST00000458640 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
DDX39B-214ENST00000458640 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
DDX39B-214ENST00000458640 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
DDX39B-214ENST00000458640 CFAP43Q8NDM7 1665 aa16.31■□□□□ 0.2
DDX39B-214ENST00000458640 TIAM1Q13009 1591 aa16.31■□□□□ 0.2
DDX39B-214ENST00000458640 CASKIN1Q8WXD9 1431 aa16.3■□□□□ 0.2
DDX39B-214ENST00000458640 P3H3Q8IVL6 736 aa16.29■□□□□ 0.2
DDX39B-214ENST00000458640 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
DDX39B-214ENST00000458640 UBE2Q2Q8WVN8 375 aa16.27■□□□□ 0.2
DDX39B-214ENST00000458640 NUP160Q12769 1436 aa16.26■□□□□ 0.19
DDX39B-214ENST00000458640 KIAA0556O60303 1618 aa16.24■□□□□ 0.19
DDX39B-214ENST00000458640 FBLN2P98095 1184 aa16.24■□□□□ 0.19
DDX39B-214ENST00000458640 CHD1O14646 1710 aa16.21■□□□□ 0.19
DDX39B-214ENST00000458640 HECW1Q76N89 1606 aa16.21■□□□□ 0.19
DDX39B-214ENST00000458640 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.19
DDX39B-214ENST00000458640 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
DDX39B-214ENST00000458640 KANK4Q5T7N3 995 aaPredicted RBP16.19■□□□□ 0.18
DDX39B-214ENST00000458640 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
DDX39B-214ENST00000458640 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
DDX39B-214ENST00000458640 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
DDX39B-214ENST00000458640 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
DDX39B-214ENST00000458640 CARMIL2Q6F5E8 1435 aa16.17■□□□□ 0.18
DDX39B-214ENST00000458640 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
DDX39B-214ENST00000458640 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
DDX39B-214ENST00000458640 ANO8Q9HCE9 1232 aaPredicted RBP16.12■□□□□ 0.17
DDX39B-214ENST00000458640 EHBP1L1Q8N3D4 1523 aa16.11■□□□□ 0.17
DDX39B-214ENST00000458640 RAPGEF6Q8TEU7 1601 aa16.1■□□□□ 0.17
DDX39B-214ENST00000458640 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
DDX39B-214ENST00000458640 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
DDX39B-214ENST00000458640 EPRSP07814 1512 aaKnown RBP16.08■□□□□ 0.16
DDX39B-214ENST00000458640 SUPT6HQ7KZ85 1726 aaKnown RBP16.07■□□□□ 0.16
DDX39B-214ENST00000458640 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
DDX39B-214ENST00000458640 SHROOM2Q13796 1616 aa16.07■□□□□ 0.16
DDX39B-214ENST00000458640 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
DDX39B-214ENST00000458640 DEKP35659 375 aaKnown RBP16.04■□□□□ 0.16
DDX39B-214ENST00000458640 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
DDX39B-214ENST00000458640 PHLDB1Q86UU1 1377 aa16.01■□□□□ 0.15
DDX39B-214ENST00000458640 NUP153P49790 1475 aaKnown RBP16.01■□□□□ 0.15
DDX39B-214ENST00000458640 MSH5O43196 834 aa16.01■□□□□ 0.15
DDX39B-214ENST00000458640 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
DDX39B-214ENST00000458640 CLASP1Q7Z460 1538 aa16■□□□□ 0.15
DDX39B-214ENST00000458640 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
DDX39B-214ENST00000458640 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
DDX39B-214ENST00000458640 ABCA8O94911 1581 aa15.98■□□□□ 0.15
DDX39B-214ENST00000458640 MAGI3Q5TCQ9 1506 aa15.98■□□□□ 0.15
DDX39B-214ENST00000458640 PLB1Q6P1J6 1458 aa15.97■□□□□ 0.15
DDX39B-214ENST00000458640 EIF5BO60841 1220 aaKnown RBP15.97■□□□□ 0.15
DDX39B-214ENST00000458640 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.97■□□□□ 0.15
DDX39B-214ENST00000458640 CDK11AQ9UQ88 783 aaPredicted RBP15.97■□□□□ 0.15
DDX39B-214ENST00000458640 ARHGEF11O15085 1522 aa15.96■□□□□ 0.15
DDX39B-214ENST00000458640 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
DDX39B-214ENST00000458640 FGD6Q6ZV73 1430 aa15.95■□□□□ 0.14
DDX39B-214ENST00000458640 PTPRGP23470 1445 aa15.94■□□□□ 0.14
DDX39B-214ENST00000458640 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
DDX39B-214ENST00000458640 NEFLP07196 543 aa15.9■□□□□ 0.14
DDX39B-214ENST00000458640 SALL2Q9Y467 1007 aaPredicted RBP15.9■□□□□ 0.14
DDX39B-214ENST00000458640 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
DDX39B-214ENST00000458640 ADCY10Q96PN6 1610 aa15.9■□□□□ 0.14
DDX39B-214ENST00000458640 TROQ12816 1431 aaPredicted RBP15.89■□□□□ 0.13
DDX39B-214ENST00000458640 PTPN23Q9H3S7 1636 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms