RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 ZNF608Q9ULD9 1512 aaPredicted RBP31.2■■■□□ 2.59
TMED4-203ENST00000457408 HNRNPUL2Q1KMD3 747 aaKnown RBP31.2■■■□□ 2.59
TMED4-203ENST00000457408 ZEB1P37275 1124 aaPredicted RBP31.18■■■□□ 2.58
TMED4-203ENST00000457408 IFT140Q96RY7 1462 aa31.18■■■□□ 2.58
TMED4-203ENST00000457408 CCER1Q8TC90 406 aaPredicted RBP31.18■■■□□ 2.58
TMED4-203ENST00000457408 CTTNBP2Q8WZ74 1663 aa31.17■■■□□ 2.58
TMED4-203ENST00000457408 FHOD3Q2V2M9 1422 aa31.17■■■□□ 2.58
TMED4-203ENST00000457408 PBRM1Q86U86 1689 aa31.16■■■□□ 2.58
TMED4-203ENST00000457408 GRIN2BQ13224 1484 aa31.1■■■□□ 2.57
TMED4-203ENST00000457408 FHAD1B1AJZ9 1412 aa31.08■■■□□ 2.57
TMED4-203ENST00000457408 THOC2Q8NI27 1593 aaKnown RBP31.07■■■□□ 2.56
TMED4-203ENST00000457408 EFCAB5A4FU69 1503 aa31.02■■■□□ 2.56
TMED4-203ENST00000457408 ADAMTS12P58397 1594 aa31■■■□□ 2.55
TMED4-203ENST00000457408 PCF11O94913 1555 aaKnown RBP30.97■■■□□ 2.55
TMED4-203ENST00000457408 EIF4G3O43432 1585 aaKnown RBP30.95■■■□□ 2.55
TMED4-203ENST00000457408 TIAM1Q13009 1591 aa30.95■■■□□ 2.54
TMED4-203ENST00000457408 SNAPC4Q5SXM2 1469 aa30.94■■■□□ 2.54
TMED4-203ENST00000457408 FBLN2P98095 1184 aa30.89■■■□□ 2.54
TMED4-203ENST00000457408 FMN1Q68DA7 1419 aa30.87■■■□□ 2.53
TMED4-203ENST00000457408 SAMD9Q5K651 1589 aa30.85■■■□□ 2.53
TMED4-203ENST00000457408 CASKIN1Q8WXD9 1431 aa30.85■■■□□ 2.53
TMED4-203ENST00000457408 LRRC9Q6ZRR7 1453 aa30.85■■■□□ 2.53
TMED4-203ENST00000457408 FYCO1Q9BQS8 1478 aa30.84■■■□□ 2.53
TMED4-203ENST00000457408 MAP3K1Q13233 1512 aa30.83■■■□□ 2.53
TMED4-203ENST00000457408 CHMP7Q8WUX9 453 aaPredicted RBP30.82■■■□□ 2.53
TMED4-203ENST00000457408 ITGAEP38570 1179 aa30.82■■■□□ 2.52
TMED4-203ENST00000457408 IQGAP2Q13576 1575 aa30.82■■■□□ 2.52
TMED4-203ENST00000457408 RRBP1Q9P2E9 1410 aaKnown RBP30.77■■■□□ 2.52
TMED4-203ENST00000457408 CCNB3Q8WWL7 1395 aa30.76■■■□□ 2.52
TMED4-203ENST00000457408 GRIN2AQ12879 1464 aa30.75■■■□□ 2.51
TMED4-203ENST00000457408 CFAP43Q8NDM7 1665 aa30.75■■■□□ 2.51
TMED4-203ENST00000457408 PHLDB1Q86UU1 1377 aa30.71■■■□□ 2.51
TMED4-203ENST00000457408 MAGI1Q96QZ7 1491 aaPredicted RBP30.7■■■□□ 2.51
TMED4-203ENST00000457408 KIAA0586Q9BVV6 1533 aa30.66■■■□□ 2.5
TMED4-203ENST00000457408 ARID3CA6NKF2 412 aa30.66■■■□□ 2.5
TMED4-203ENST00000457408 FAM50AQ14320 339 aaKnown RBP30.66■■■□□ 2.5
TMED4-203ENST00000457408 SYNJ2O15056 1496 aa30.66■■■□□ 2.5
TMED4-203ENST00000457408 MTUS2Q5JR59 1369 aa30.63■■■□□ 2.49
TMED4-203ENST00000457408 UGGT2Q9NYU1 1516 aa30.59■■■□□ 2.49
TMED4-203ENST00000457408 LRRIQ1Q96JM4 1722 aa30.58■■■□□ 2.49
TMED4-203ENST00000457408 CEP170Q5SW79 1584 aa30.55■■■□□ 2.48
TMED4-203ENST00000457408 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
TMED4-203ENST00000457408 KIAA0556O60303 1618 aa30.48■■■□□ 2.47
TMED4-203ENST00000457408 JPH4Q96JJ6 628 aa30.46■■■□□ 2.47
TMED4-203ENST00000457408 HECW1Q76N89 1606 aa30.45■■■□□ 2.47
TMED4-203ENST00000457408 CDK13Q14004 1512 aaKnown RBP30.43■■■□□ 2.46
TMED4-203ENST00000457408 CCDC18Q5T9S5 1454 aa30.42■■■□□ 2.46
TMED4-203ENST00000457408 NUP160Q12769 1436 aa30.42■■■□□ 2.46
TMED4-203ENST00000457408 EPRSP07814 1512 aaKnown RBP30.42■■■□□ 2.46
TMED4-203ENST00000457408 NCOA2Q15596 1464 aa30.4■■■□□ 2.46
TMED4-203ENST00000457408 MAGI3Q5TCQ9 1506 aa30.39■■■□□ 2.46
TMED4-203ENST00000457408 FGD6Q6ZV73 1430 aa30.37■■■□□ 2.45
TMED4-203ENST00000457408 DHX57Q6P158 1386 aaKnown RBP30.36■■■□□ 2.45
TMED4-203ENST00000457408 EHBP1L1Q8N3D4 1523 aa30.36■■■□□ 2.45
TMED4-203ENST00000457408 SUPT6HQ7KZ85 1726 aaKnown RBP30.33■■■□□ 2.45
TMED4-203ENST00000457408 CARMIL2Q6F5E8 1435 aa30.32■■■□□ 2.44
TMED4-203ENST00000457408 RAB3GAP2Q9H2M9 1393 aa30.32■■■□□ 2.44
TMED4-203ENST00000457408 MYOM3Q5VTT5 1437 aa30.29■■■□□ 2.44
TMED4-203ENST00000457408 NUP153P49790 1475 aaKnown RBP30.27■■■□□ 2.44
TMED4-203ENST00000457408 SETD5Q9C0A6 1442 aa30.26■■■□□ 2.44
TMED4-203ENST00000457408 PLB1Q6P1J6 1458 aa30.26■■■□□ 2.43
TMED4-203ENST00000457408 RAPGEF6Q8TEU7 1601 aa30.26■■■□□ 2.43
TMED4-203ENST00000457408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.22■■■□□ 2.436e-7■■□□□ 11.8
TMED4-203ENST00000457408 CHD1O14646 1710 aa30.21■■■□□ 2.43
TMED4-203ENST00000457408 CDK11AQ9UQ88 783 aaPredicted RBP30.18■■■□□ 2.42
TMED4-203ENST00000457408 PRG4Q92954 1404 aaPredicted RBP30.17■■■□□ 2.42
TMED4-203ENST00000457408 ARHGEF11O15085 1522 aa30.16■■■□□ 2.42
TMED4-203ENST00000457408 CLSPNQ9HAW4 1339 aa30.14■■■□□ 2.42
TMED4-203ENST00000457408 PTPRKQ15262 1439 aa30.13■■■□□ 2.41
TMED4-203ENST00000457408 PTPN23Q9H3S7 1636 aa30.12■■■□□ 2.41
TMED4-203ENST00000457408 CHIC2Q9UKJ5 165 aa30.1■■■□□ 2.41
TMED4-203ENST00000457408 PTPRGP23470 1445 aa30.04■■■□□ 2.4
TMED4-203ENST00000457408 RRP7BPQ9NSQ0 103 aa30.01■■■□□ 2.39
TMED4-203ENST00000457408 ZNF316A6NFI3 1004 aaPredicted RBP29.99■■■□□ 2.39
TMED4-203ENST00000457408 TROQ12816 1431 aaPredicted RBP29.99■■■□□ 2.39
TMED4-203ENST00000457408 ZNF644Q9H582 1327 aaPredicted RBP29.99■■■□□ 2.39
TMED4-203ENST00000457408 MIA2Q96PC5 1412 aa29.97■■■□□ 2.39
TMED4-203ENST00000457408 ABCA8O94911 1581 aa29.97■■■□□ 2.39
TMED4-203ENST00000457408 PLEKHD1A6NEE1 506 aa29.97■■■□□ 2.39
TMED4-203ENST00000457408 TCOF1Q13428 1488 aaKnown RBP29.97■■■□□ 2.39
TMED4-203ENST00000457408 MAPKBP1O60336 1514 aa29.95■■■□□ 2.38
TMED4-203ENST00000457408 HFM1A2PYH4 1435 aa29.95■■■□□ 2.38
TMED4-203ENST00000457408 NEUROD1Q13562 356 aa29.93■■■□□ 2.38
TMED4-203ENST00000457408 ZNF777Q9ULD5 760 aaPredicted RBP29.93■■■□□ 2.38
TMED4-203ENST00000457408 ATP10BO94823 1461 aa29.93■■■□□ 2.38
TMED4-203ENST00000457408 DIEXFQ68CQ4 756 aaKnown RBP29.92■■■□□ 2.38
TMED4-203ENST00000457408 NAIPQ13075 1403 aa29.91■■■□□ 2.38
TMED4-203ENST00000457408 SIN3AQ96ST3 1273 aa29.91■■■□□ 2.38
TMED4-203ENST00000457408 CFDP1Q9UEE9 299 aaPredicted RBP29.91■■■□□ 2.38
TMED4-203ENST00000457408 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
TMED4-203ENST00000457408 KIF14Q15058 1648 aa29.9■■■□□ 2.38
TMED4-203ENST00000457408 SHROOM2Q13796 1616 aa29.85■■■□□ 2.37
TMED4-203ENST00000457408 UACAQ9BZF9 1416 aa29.81■■■□□ 2.36
TMED4-203ENST00000457408 GPATCH8Q9UKJ3 1502 aaKnown RBP29.81■■■□□ 2.36
TMED4-203ENST00000457408 TRIM52Q96A61 297 aa29.79■■■□□ 2.36
TMED4-203ENST00000457408 DAPK1P53355 1430 aa29.78■■■□□ 2.36
TMED4-203ENST00000457408 ABCC5O15440 1437 aa29.76■■■□□ 2.35
TMED4-203ENST00000457408 ADCY10Q96PN6 1610 aa29.75■■■□□ 2.35
TMED4-203ENST00000457408 CLASP1Q7Z460 1538 aa29.74■■■□□ 2.35
TMED4-203ENST00000457408 CAMSAP2Q08AD1 1489 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms