RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 PRG4Q92954 1404 aaPredicted RBP32.34■■■□□ 2.77
UBE2D4-208ENST00000454350 JPH4Q96JJ6 628 aa32.34■■■□□ 2.77
UBE2D4-208ENST00000454350 KIAA0586Q9BVV6 1533 aa32.23■■■□□ 2.75
UBE2D4-208ENST00000454350 CARMIL1Q5VZK9 1371 aa32.16■■■□□ 2.74
UBE2D4-208ENST00000454350 KIF13AQ9H1H9 1805 aa32.1■■■□□ 2.73
UBE2D4-208ENST00000454350 ADCY10Q96PN6 1610 aa32.05■■■□□ 2.72
UBE2D4-208ENST00000454350 IQGAP2Q13576 1575 aa31.96■■■□□ 2.71
UBE2D4-208ENST00000454350 MAPKBP1O60336 1514 aa31.94■■■□□ 2.7
UBE2D4-208ENST00000454350 RAPGEF2Q9Y4G8 1499 aa31.91■■■□□ 2.7
UBE2D4-208ENST00000454350 ABCC10Q5T3U5 1492 aa31.86■■■□□ 2.69
UBE2D4-208ENST00000454350 PTPRGP23470 1445 aa31.84■■■□□ 2.69
UBE2D4-208ENST00000454350 DISP1Q96F81 1524 aa31.84■■■□□ 2.69
UBE2D4-208ENST00000454350 DIP2BQ9P265 1576 aa31.83■■■□□ 2.69
UBE2D4-208ENST00000454350 CARMIL2Q6F5E8 1435 aa31.83■■■□□ 2.69
UBE2D4-208ENST00000454350 TNIKQ9UKE5 1360 aa31.81■■■□□ 2.68
UBE2D4-208ENST00000454350 NPM1P06748 294 aaKnown RBP eCLIP31.81■■■□□ 2.68
UBE2D4-208ENST00000454350 UGGT2Q9NYU1 1516 aa31.8■■■□□ 2.68
UBE2D4-208ENST00000454350 FAM69CQ0P6D2 419 aa31.74■■■□□ 2.67
UBE2D4-208ENST00000454350 CTTNBP2Q8WZ74 1663 aa31.73■■■□□ 2.67
UBE2D4-208ENST00000454350 ABCC2Q92887 1545 aa31.7■■■□□ 2.67
UBE2D4-208ENST00000454350 KIAA0556O60303 1618 aa31.69■■■□□ 2.66
UBE2D4-208ENST00000454350 UHRF1BP1LA0JNW5 1464 aa31.69■■■□□ 2.66
UBE2D4-208ENST00000454350 TTBK1Q5TCY1 1321 aaPredicted RBP31.69■■■□□ 2.66
UBE2D4-208ENST00000454350 PRXQ9BXM0 1461 aa31.68■■■□□ 2.66
UBE2D4-208ENST00000454350 UACAQ9BZF9 1416 aa31.64■■■□□ 2.66
UBE2D4-208ENST00000454350 TSPOAP1O95153 1857 aa31.63■■■□□ 2.65
UBE2D4-208ENST00000454350 ASXL2Q76L83 1435 aa31.56■■■□□ 2.64
UBE2D4-208ENST00000454350 KDM5BQ9UGL1 1544 aa31.55■■■□□ 2.64
UBE2D4-208ENST00000454350 PLB1Q6P1J6 1458 aa31.52■■■□□ 2.64
UBE2D4-208ENST00000454350 GLI2P10070 1586 aa31.51■■■□□ 2.64
UBE2D4-208ENST00000454350 ZCCHC11Q5TAX3 1644 aaKnown RBP31.51■■■□□ 2.63
UBE2D4-208ENST00000454350 PPRC1Q5VV67 1664 aaKnown RBP31.5■■■□□ 2.63
UBE2D4-208ENST00000454350 GOLGA3Q08378 1498 aa31.46■■■□□ 2.63
UBE2D4-208ENST00000454350 KDM6BO15054 1643 aa31.46■■■□□ 2.63
UBE2D4-208ENST00000454350 ABCA8O94911 1581 aa31.42■■■□□ 2.62
UBE2D4-208ENST00000454350 EPRSP07814 1512 aaKnown RBP31.39■■■□□ 2.62
UBE2D4-208ENST00000454350 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
UBE2D4-208ENST00000454350 MAP3K4Q9Y6R4 1608 aa31.38■■■□□ 2.61
UBE2D4-208ENST00000454350 AEBP2Q6ZN18 517 aaPredicted RBP31.35■■■□□ 2.61
UBE2D4-208ENST00000454350 EEA1Q15075 1411 aa31.3■■■□□ 2.6
UBE2D4-208ENST00000454350 WDR7Q9Y4E6 1490 aa31.28■■■□□ 2.6
UBE2D4-208ENST00000454350 SAMD9Q5K651 1589 aa31.28■■■□□ 2.6
UBE2D4-208ENST00000454350 COL17A1Q9UMD9 1497 aaPredicted RBP31.21■■■□□ 2.59
UBE2D4-208ENST00000454350 P3H3Q8IVL6 736 aa31.17■■■□□ 2.58
UBE2D4-208ENST00000454350 CFAP43Q8NDM7 1665 aa31.15■■■□□ 2.58
UBE2D4-208ENST00000454350 TEX14Q8IWB6 1497 aa31.14■■■□□ 2.58
UBE2D4-208ENST00000454350 KIF21BO75037 1637 aa31.13■■■□□ 2.57
UBE2D4-208ENST00000454350 ATP10BO94823 1461 aa31.12■■■□□ 2.57
UBE2D4-208ENST00000454350 FAM9AQ8IZU1 332 aaPredicted RBP31.09■■■□□ 2.57
UBE2D4-208ENST00000454350 RAPGEF6Q8TEU7 1601 aa31.09■■■□□ 2.57
UBE2D4-208ENST00000454350 KDM4FA0A1W2PPD8 638 aa31.07■■■□□ 2.56
UBE2D4-208ENST00000454350 MAGI3Q5TCQ9 1506 aa31.07■■■□□ 2.56
UBE2D4-208ENST00000454350 CD109Q6YHK3 1445 aa31.05■■■□□ 2.56
UBE2D4-208ENST00000454350 KCNH8Q96L42 1107 aa31.04■■■□□ 2.56
UBE2D4-208ENST00000454350 ARID3CA6NKF2 412 aa31.01■■■□□ 2.55
UBE2D4-208ENST00000454350 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
UBE2D4-208ENST00000454350 FHOD3Q2V2M9 1422 aa30.99■■■□□ 2.55
UBE2D4-208ENST00000454350 NUP153P49790 1475 aaKnown RBP30.97■■■□□ 2.55
UBE2D4-208ENST00000454350 ABCA9Q8IUA7 1624 aa30.96■■■□□ 2.55
UBE2D4-208ENST00000454350 EFCAB5A4FU69 1503 aa30.93■■■□□ 2.54
UBE2D4-208ENST00000454350 RANGAP1P46060 587 aaPredicted RBP30.93■■■□□ 2.54
UBE2D4-208ENST00000454350 ADGRL1O94910 1474 aa30.85■■■□□ 2.53
UBE2D4-208ENST00000454350 ARAP3Q8WWN8 1544 aa30.83■■■□□ 2.53
UBE2D4-208ENST00000454350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.75■■■□□ 2.51
UBE2D4-208ENST00000454350 HNRNPUL2Q1KMD3 747 aaKnown RBP30.75■■■□□ 2.51
UBE2D4-208ENST00000454350 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
UBE2D4-208ENST00000454350 UBTFP17480 764 aaKnown RBP30.72■■■□□ 2.51
UBE2D4-208ENST00000454350 EHMT2Q96KQ7 1210 aa30.72■■■□□ 2.51
UBE2D4-208ENST00000454350 PHLDB1Q86UU1 1377 aa30.71■■■□□ 2.51
UBE2D4-208ENST00000454350 NEO1Q92859 1461 aa30.7■■■□□ 2.51
UBE2D4-208ENST00000454350 CDK13Q14004 1512 aaKnown RBP30.68■■■□□ 2.5
UBE2D4-208ENST00000454350 PLEKHD1A6NEE1 506 aa30.66■■■□□ 2.5
UBE2D4-208ENST00000454350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.66■■■□□ 2.5
UBE2D4-208ENST00000454350 FRMPD1Q5SYB0 1578 aa30.66■■■□□ 2.5
UBE2D4-208ENST00000454350 TTC37Q6PGP7 1564 aa30.63■■■□□ 2.49
UBE2D4-208ENST00000454350 FMN1Q68DA7 1419 aa30.6■■■□□ 2.49
UBE2D4-208ENST00000454350 RAPGEF3O95398 923 aa30.59■■■□□ 2.49
UBE2D4-208ENST00000454350 HECW1Q76N89 1606 aa30.58■■■□□ 2.49
UBE2D4-208ENST00000454350 LRRIQ1Q96JM4 1722 aa30.58■■■□□ 2.49
UBE2D4-208ENST00000454350 RICTORQ6R327 1708 aa30.57■■■□□ 2.48
UBE2D4-208ENST00000454350 CFAP74Q9C0B2 1584 aa30.54■■■□□ 2.48
UBE2D4-208ENST00000454350 FANCAO15360 1455 aa30.52■■■□□ 2.48
UBE2D4-208ENST00000454350 AKNAQ7Z591 1439 aa30.51■■■□□ 2.47
UBE2D4-208ENST00000454350 ADAMTSL3P82987 1691 aa30.46■■■□□ 2.47
UBE2D4-208ENST00000454350 DENND4BO75064 1496 aaPredicted RBP30.46■■■□□ 2.47
UBE2D4-208ENST00000454350 KIF14Q15058 1648 aa30.44■■■□□ 2.46
UBE2D4-208ENST00000454350 PLCH2O75038 1416 aa30.43■■■□□ 2.46
UBE2D4-208ENST00000454350 ARHGEF40Q8TER5 1519 aa30.42■■■□□ 2.46
UBE2D4-208ENST00000454350 MYO5CQ9NQX4 1742 aa30.42■■■□□ 2.46
UBE2D4-208ENST00000454350 ATP1B4Q9UN42 357 aaPredicted RBP30.42■■■□□ 2.46
UBE2D4-208ENST00000454350 ZMYM4Q5VZL5 1548 aa30.41■■■□□ 2.46
UBE2D4-208ENST00000454350 BCORL1Q5H9F3 1711 aa30.4■■■□□ 2.46
UBE2D4-208ENST00000454350 HECW2Q9P2P5 1572 aa30.4■■■□□ 2.46
UBE2D4-208ENST00000454350 PCF11O94913 1555 aaKnown RBP30.39■■■□□ 2.46
UBE2D4-208ENST00000454350 TROQ12816 1431 aaPredicted RBP30.38■■■□□ 2.45
UBE2D4-208ENST00000454350 SIGLEC1Q9BZZ2 1709 aa30.35■■■□□ 2.45
UBE2D4-208ENST00000454350 CASKIN1Q8WXD9 1431 aa30.34■■■□□ 2.45
UBE2D4-208ENST00000454350 CDK11AQ9UQ88 783 aaPredicted RBP30.33■■■□□ 2.45
UBE2D4-208ENST00000454350 POGZQ7Z3K3 1410 aa30.3■■■□□ 2.44
UBE2D4-208ENST00000454350 SCAPERQ9BY12 1400 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms