RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 P3H3Q8IVL6 736 aa30.37■■■□□ 2.45
PDCD2-204ENST00000453163 PCF11O94913 1555 aaKnown RBP30.35■■■□□ 2.45
PDCD2-204ENST00000453163 MAP3K1Q13233 1512 aa30.35■■■□□ 2.45
PDCD2-204ENST00000453163 FHAD1B1AJZ9 1412 aa30.35■■■□□ 2.45
PDCD2-204ENST00000453163 EFCAB5A4FU69 1503 aa30.34■■■□□ 2.45
PDCD2-204ENST00000453163 FHOD3Q2V2M9 1422 aa30.33■■■□□ 2.45
PDCD2-204ENST00000453163 CFAP43Q8NDM7 1665 aa30.28■■■□□ 2.44
PDCD2-204ENST00000453163 LRRC9Q6ZRR7 1453 aa30.26■■■□□ 2.43
PDCD2-204ENST00000453163 CCNB3Q8WWL7 1395 aa30.26■■■□□ 2.43
PDCD2-204ENST00000453163 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
PDCD2-204ENST00000453163 PBRM1Q86U86 1689 aa30.21■■■□□ 2.43
PDCD2-204ENST00000453163 FYCO1Q9BQS8 1478 aa30.19■■■□□ 2.42
PDCD2-204ENST00000453163 ATP1B4Q9UN42 357 aaPredicted RBP30.16■■■□□ 2.42
PDCD2-204ENST00000453163 CASKIN1Q8WXD9 1431 aa30.15■■■□□ 2.42
PDCD2-204ENST00000453163 SAMD9Q5K651 1589 aa30.15■■■□□ 2.42
PDCD2-204ENST00000453163 PELP1Q8IZL8 1130 aaKnown RBP30.15■■■□□ 2.42
PDCD2-204ENST00000453163 AQRO60306 1485 aaKnown RBP eCLIP30.14■■■□□ 2.429e-7■■■■■ 36.8
PDCD2-204ENST00000453163 PHLDB1Q86UU1 1377 aa30.1■■■□□ 2.41
PDCD2-204ENST00000453163 FMN1Q68DA7 1419 aa30.1■■■□□ 2.41
PDCD2-204ENST00000453163 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
PDCD2-204ENST00000453163 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
PDCD2-204ENST00000453163 SCAF1Q9H7N4 1312 aaKnown RBP30.07■■■□□ 2.4
PDCD2-204ENST00000453163 ITGAEP38570 1179 aa30.07■■■□□ 2.4
PDCD2-204ENST00000453163 WDR62O43379 1518 aa30.05■■■□□ 2.4
PDCD2-204ENST00000453163 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
PDCD2-204ENST00000453163 LRRIQ1Q96JM4 1722 aa29.99■■■□□ 2.39
PDCD2-204ENST00000453163 GRIN2BQ13224 1484 aa29.99■■■□□ 2.39
PDCD2-204ENST00000453163 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
PDCD2-204ENST00000453163 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
PDCD2-204ENST00000453163 DIEXFQ68CQ4 756 aaKnown RBP29.97■■■□□ 2.39
PDCD2-204ENST00000453163 CLSPNQ9HAW4 1339 aa29.96■■■□□ 2.39
PDCD2-204ENST00000453163 ZNF316A6NFI3 1004 aaPredicted RBP29.94■■■□□ 2.38
PDCD2-204ENST00000453163 IQGAP2Q13576 1575 aa29.92■■■□□ 2.38
PDCD2-204ENST00000453163 FAM50AQ14320 339 aaKnown RBP29.9■■■□□ 2.38
PDCD2-204ENST00000453163 ERCC6Q03468 1493 aa29.89■■■□□ 2.38
PDCD2-204ENST00000453163 RAB3GAP2Q9H2M9 1393 aa29.88■■■□□ 2.37
PDCD2-204ENST00000453163 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
PDCD2-204ENST00000453163 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
PDCD2-204ENST00000453163 MTUS2Q5JR59 1369 aa29.84■■■□□ 2.37
PDCD2-204ENST00000453163 SETD5Q9C0A6 1442 aa29.79■■■□□ 2.36
PDCD2-204ENST00000453163 FGD6Q6ZV73 1430 aa29.76■■■□□ 2.36
PDCD2-204ENST00000453163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.74■■■□□ 2.35
PDCD2-204ENST00000453163 EHBP1L1Q8N3D4 1523 aa29.73■■■□□ 2.35
PDCD2-204ENST00000453163 UGGT2Q9NYU1 1516 aa29.72■■■□□ 2.35
PDCD2-204ENST00000453163 HECW1Q76N89 1606 aa29.72■■■□□ 2.35
PDCD2-204ENST00000453163 SUPT6HQ7KZ85 1726 aaKnown RBP29.72■■■□□ 2.35
PDCD2-204ENST00000453163 NCOA2Q15596 1464 aa29.72■■■□□ 2.35
PDCD2-204ENST00000453163 MAPKBP1O60336 1514 aa29.7■■■□□ 2.35
PDCD2-204ENST00000453163 MAGI3Q5TCQ9 1506 aa29.7■■■□□ 2.34
PDCD2-204ENST00000453163 CCDC18Q5T9S5 1454 aa29.69■■■□□ 2.34
PDCD2-204ENST00000453163 GRIN2AQ12879 1464 aa29.69■■■□□ 2.34
PDCD2-204ENST00000453163 KIAA0586Q9BVV6 1533 aa29.66■■■□□ 2.34
PDCD2-204ENST00000453163 MYOM3Q5VTT5 1437 aa29.64■■■□□ 2.34
PDCD2-204ENST00000453163 EPRSP07814 1512 aaKnown RBP29.63■■■□□ 2.33
PDCD2-204ENST00000453163 ACIN1Q9UKV3 1341 aaKnown RBP29.62■■■□□ 2.33
PDCD2-204ENST00000453163 KIAA0556O60303 1618 aa29.62■■■□□ 2.33
PDCD2-204ENST00000453163 ARHGEF11O15085 1522 aa29.6■■■□□ 2.33
PDCD2-204ENST00000453163 DISP1Q96F81 1524 aa29.6■■■□□ 2.33
PDCD2-204ENST00000453163 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
PDCD2-204ENST00000453163 CDK13Q14004 1512 aaKnown RBP29.6■■■□□ 2.33
PDCD2-204ENST00000453163 PTPRKQ15262 1439 aa29.55■■■□□ 2.32
PDCD2-204ENST00000453163 PTPN23Q9H3S7 1636 aa29.54■■■□□ 2.32
PDCD2-204ENST00000453163 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
PDCD2-204ENST00000453163 CEP170Q5SW79 1584 aa29.53■■■□□ 2.32
PDCD2-204ENST00000453163 ARID3CA6NKF2 412 aa29.52■■■□□ 2.32
PDCD2-204ENST00000453163 NEUROD1Q13562 356 aa29.5■■■□□ 2.31
PDCD2-204ENST00000453163 CHMP7Q8WUX9 453 aaPredicted RBP29.49■■■□□ 2.31
PDCD2-204ENST00000453163 HFM1A2PYH4 1435 aa29.46■■■□□ 2.31
PDCD2-204ENST00000453163 RAPGEF6Q8TEU7 1601 aa29.44■■■□□ 2.3
PDCD2-204ENST00000453163 FBLN2P98095 1184 aa29.43■■■□□ 2.3
PDCD2-204ENST00000453163 NUP153P49790 1475 aaKnown RBP29.42■■■□□ 2.3
PDCD2-204ENST00000453163 TCOF1Q13428 1488 aaKnown RBP29.41■■■□□ 2.3
PDCD2-204ENST00000453163 MIER1Q8N108 512 aa29.4■■■□□ 2.3
PDCD2-204ENST00000453163 SIN3AQ96ST3 1273 aa29.4■■■□□ 2.3
PDCD2-204ENST00000453163 NAIPQ13075 1403 aa29.39■■■□□ 2.3
PDCD2-204ENST00000453163 NUP160Q12769 1436 aa29.37■■■□□ 2.29
PDCD2-204ENST00000453163 CENPBP07199 599 aaPredicted RBP29.33■■■□□ 2.29
PDCD2-204ENST00000453163 MIA2Q96PC5 1412 aa29.32■■■□□ 2.28
PDCD2-204ENST00000453163 UACAQ9BZF9 1416 aa29.31■■■□□ 2.28
PDCD2-204ENST00000453163 PLB1Q6P1J6 1458 aa29.28■■■□□ 2.28
PDCD2-204ENST00000453163 GCC2Q8IWJ2 1684 aa29.28■■■□□ 2.28
PDCD2-204ENST00000453163 JPH4Q96JJ6 628 aa29.26■■■□□ 2.27
PDCD2-204ENST00000453163 CHIC2Q9UKJ5 165 aa29.26■■■□□ 2.27
PDCD2-204ENST00000453163 CARMIL2Q6F5E8 1435 aa29.24■■■□□ 2.27
PDCD2-204ENST00000453163 GTF3C3Q9Y5Q9 886 aa29.24■■■□□ 2.27
PDCD2-204ENST00000453163 RRP7BPQ9NSQ0 103 aa29.24■■■□□ 2.27
PDCD2-204ENST00000453163 CDK11AQ9UQ88 783 aaPredicted RBP29.19■■■□□ 2.26
PDCD2-204ENST00000453163 TIMELESSQ9UNS1 1208 aa29.19■■■□□ 2.26
PDCD2-204ENST00000453163 AKNAQ7Z591 1439 aa29.19■■■□□ 2.26
PDCD2-204ENST00000453163 PRG4Q92954 1404 aaPredicted RBP29.18■■■□□ 2.26
PDCD2-204ENST00000453163 YTHDC1Q96MU7 727 aaKnown RBP29.17■■■□□ 2.26
PDCD2-204ENST00000453163 KDM6BO15054 1643 aa29.17■■■□□ 2.26
PDCD2-204ENST00000453163 TROQ12816 1431 aaPredicted RBP29.16■■■□□ 2.26
PDCD2-204ENST00000453163 DNMT1P26358 1616 aaKnown RBP29.13■■■□□ 2.25
PDCD2-204ENST00000453163 DAPK1P53355 1430 aa29.12■■■□□ 2.25
PDCD2-204ENST00000453163 KIF14Q15058 1648 aa29.11■■■□□ 2.25
PDCD2-204ENST00000453163 ZNF644Q9H582 1327 aaPredicted RBP29.11■■■□□ 2.25
PDCD2-204ENST00000453163 ADCY10Q96PN6 1610 aa29.1■■■□□ 2.25
PDCD2-204ENST00000453163 ABCA8O94911 1581 aa29.09■■■□□ 2.25
PDCD2-204ENST00000453163 PPP1R15AO75807 674 aaPredicted RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms