RNA–Protein interactions for RNA: ENST00000452938.5

CRLS1-203, Transcript of cardiolipin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CRLS1, Length 3,859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLS1-203ENST00000452938 ANP32CO43423 234 aa21.86■■□□□ 1.09
CRLS1-203ENST00000452938 FHOD3Q2V2M9 1422 aa21.83■■□□□ 1.09
CRLS1-203ENST00000452938 ERICH6Q7L0X2 663 aa21.82■■□□□ 1.08
CRLS1-203ENST00000452938 FGD5Q6ZNL6 1462 aa21.82■■□□□ 1.08
CRLS1-203ENST00000452938 IGF1RP08069 1367 aa21.82■■□□□ 1.08
CRLS1-203ENST00000452938 FKBP8Q14318 412 aa21.79■■□□□ 1.08
CRLS1-203ENST00000452938 CUX1P39880 1505 aa21.77■■□□□ 1.08
CRLS1-203ENST00000452938 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.07
CRLS1-203ENST00000452938 CC2D2AQ9P2K1 1620 aa21.76■■□□□ 1.07
CRLS1-203ENST00000452938 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
CRLS1-203ENST00000452938 ERCC6Q03468 1493 aa21.75■■□□□ 1.07
CRLS1-203ENST00000452938 CFTRP13569 1480 aa21.75■■□□□ 1.07
CRLS1-203ENST00000452938 TONSLQ96HA7 1378 aa21.7■■□□□ 1.06
CRLS1-203ENST00000452938 IRX6P78412 446 aaPredicted RBP21.68■■□□□ 1.06
CRLS1-203ENST00000452938 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
CRLS1-203ENST00000452938 KIF21BO75037 1637 aa21.67■■□□□ 1.06
CRLS1-203ENST00000452938 ARAP1Q96P48 1450 aa21.66■■□□□ 1.06
CRLS1-203ENST00000452938 KCNH8Q96L42 1107 aa21.65■■□□□ 1.06
CRLS1-203ENST00000452938 CDK11AQ9UQ88 783 aaPredicted RBP21.64■■□□□ 1.05
CRLS1-203ENST00000452938 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
CRLS1-203ENST00000452938 FOXD1Q16676 465 aa21.62■■□□□ 1.05
CRLS1-203ENST00000452938 TOP2BQ02880 1626 aa21.6■■□□□ 1.05
CRLS1-203ENST00000452938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.59■■□□□ 1.05
CRLS1-203ENST00000452938 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.05
CRLS1-203ENST00000452938 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.04
CRLS1-203ENST00000452938 HMGXB3Q12766 1538 aa21.57■■□□□ 1.04
CRLS1-203ENST00000452938 RAB3GAP2Q9H2M9 1393 aa21.56■■□□□ 1.04
CRLS1-203ENST00000452938 AQRO60306 1485 aaKnown RBP eCLIP21.56■■□□□ 1.044e-9■■■■■ 36.6
CRLS1-203ENST00000452938 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
CRLS1-203ENST00000452938 PRXQ9BXM0 1461 aa21.54■■□□□ 1.04
CRLS1-203ENST00000452938 ARHGAP35Q9NRY4 1499 aa21.51■■□□□ 1.03
CRLS1-203ENST00000452938 KDM2AQ9Y2K7 1162 aa21.51■■□□□ 1.03
CRLS1-203ENST00000452938 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
CRLS1-203ENST00000452938 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
CRLS1-203ENST00000452938 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
CRLS1-203ENST00000452938 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
CRLS1-203ENST00000452938 SUPT16HQ9Y5B9 1047 aaKnown RBP21.47■■□□□ 1.03
CRLS1-203ENST00000452938 SALL2Q9Y467 1007 aaPredicted RBP21.46■■□□□ 1.03
CRLS1-203ENST00000452938 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
CRLS1-203ENST00000452938 PHLDB1Q86UU1 1377 aa21.44■■□□□ 1.02
CRLS1-203ENST00000452938 GAPVD1Q14C86 1478 aa21.44■■□□□ 1.02
CRLS1-203ENST00000452938 PLEKHD1A6NEE1 506 aa21.43■■□□□ 1.02
CRLS1-203ENST00000452938 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
CRLS1-203ENST00000452938 SETD5Q9C0A6 1442 aa21.4■■□□□ 1.02
CRLS1-203ENST00000452938 MYT1Q01538 1121 aa21.38■■□□□ 1.01
CRLS1-203ENST00000452938 CLSPNQ9HAW4 1339 aa21.37■■□□□ 1.01
CRLS1-203ENST00000452938 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
CRLS1-203ENST00000452938 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
CRLS1-203ENST00000452938 RGL3Q3MIN7 710 aa21.35■■□□□ 1.01
CRLS1-203ENST00000452938 ZNF644Q9H582 1327 aaPredicted RBP21.34■■□□□ 1.01
CRLS1-203ENST00000452938 FMN1Q68DA7 1419 aa21.34■■□□□ 1.01
CRLS1-203ENST00000452938 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
CRLS1-203ENST00000452938 JPH4Q96JJ6 628 aa21.31■■□□□ 1
CRLS1-203ENST00000452938 ERICH3Q5RHP9 1530 aa21.29■■□□□ 1
CRLS1-203ENST00000452938 EIF4G2P78344 907 aaKnown RBP eCLIP21.28■■□□□ 11e-6■□□□□ 11.1
CRLS1-203ENST00000452938 CHGAP10645 457 aaKnown RBP21.24■□□□□ 0.99
CRLS1-203ENST00000452938 LRRC9Q6ZRR7 1453 aa21.22■□□□□ 0.99
CRLS1-203ENST00000452938 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
CRLS1-203ENST00000452938 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
CRLS1-203ENST00000452938 HNRNPMP52272 730 aaKnown RBP eCLIP21.19■□□□□ 0.985e-7■■■□□ 18.6
CRLS1-203ENST00000452938 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
CRLS1-203ENST00000452938 MPHOSPH9Q99550 1183 aa21.16■□□□□ 0.98
CRLS1-203ENST00000452938 DNMBPQ6XZF7 1577 aa21.16■□□□□ 0.98
CRLS1-203ENST00000452938 HSPA5P11021 654 aaKnown RBP21.15■□□□□ 0.98
CRLS1-203ENST00000452938 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
CRLS1-203ENST00000452938 PKD2Q13563 968 aa21.11■□□□□ 0.97
CRLS1-203ENST00000452938 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
CRLS1-203ENST00000452938 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
CRLS1-203ENST00000452938 L3MBTL2Q969R5 705 aa21.1■□□□□ 0.97
CRLS1-203ENST00000452938 ABCA10Q8WWZ4 1543 aa21.09■□□□□ 0.97
CRLS1-203ENST00000452938 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
CRLS1-203ENST00000452938 FGD6Q6ZV73 1430 aa21.08■□□□□ 0.97
CRLS1-203ENST00000452938 NPM1P06748 294 aaKnown RBP eCLIP21.08■□□□□ 0.96
CRLS1-203ENST00000452938 RRBP1Q9P2E9 1410 aaKnown RBP21.06■□□□□ 0.96
CRLS1-203ENST00000452938 TSHZ2Q9NRE2 1034 aa21.05■□□□□ 0.96
CRLS1-203ENST00000452938 CASKIN1Q8WXD9 1431 aa21.05■□□□□ 0.96
CRLS1-203ENST00000452938 CARMIL2Q6F5E8 1435 aa21.03■□□□□ 0.96
CRLS1-203ENST00000452938 B4GALNT3Q6L9W6 998 aa21.03■□□□□ 0.96
CRLS1-203ENST00000452938 DCAF11Q8TEB1 546 aa21.03■□□□□ 0.96
CRLS1-203ENST00000452938 NCOA2Q15596 1464 aa21.03■□□□□ 0.96
CRLS1-203ENST00000452938 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
CRLS1-203ENST00000452938 TIAM1Q13009 1591 aa21.02■□□□□ 0.96
CRLS1-203ENST00000452938 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
CRLS1-203ENST00000452938 CCDC18Q5T9S5 1454 aa21■□□□□ 0.95
CRLS1-203ENST00000452938 GRIN2BQ13224 1484 aa21■□□□□ 0.95
CRLS1-203ENST00000452938 PRDM2Q13029 1718 aa20.99■□□□□ 0.95
CRLS1-203ENST00000452938 SNAPC4Q5SXM2 1469 aa20.99■□□□□ 0.95
CRLS1-203ENST00000452938 CARD11Q9BXL7 1154 aa20.99■□□□□ 0.95
CRLS1-203ENST00000452938 CDK13Q14004 1512 aaKnown RBP20.98■□□□□ 0.95
CRLS1-203ENST00000452938 CCDC136Q96JN2 1154 aa20.97■□□□□ 0.95
CRLS1-203ENST00000452938 NUP155O75694 1391 aa20.96■□□□□ 0.95
CRLS1-203ENST00000452938 MYOM3Q5VTT5 1437 aa20.96■□□□□ 0.95
CRLS1-203ENST00000452938 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
CRLS1-203ENST00000452938 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
CRLS1-203ENST00000452938 NBR1Q14596 966 aa20.93■□□□□ 0.94
CRLS1-203ENST00000452938 PRG4Q92954 1404 aaPredicted RBP20.93■□□□□ 0.94
CRLS1-203ENST00000452938 DAXXQ9UER7 740 aaPredicted RBP20.92■□□□□ 0.94
CRLS1-203ENST00000452938 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
CRLS1-203ENST00000452938 PTPRGP23470 1445 aa20.91■□□□□ 0.94
CRLS1-203ENST00000452938 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 749.1 ms