RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 EFCAB5A4FU69 1503 aa23.17■■□□□ 1.3
CCHCR1-208ENST00000451521 MAP3K1Q13233 1512 aa23.17■■□□□ 1.3
CCHCR1-208ENST00000451521 WDR62O43379 1518 aa23.15■■□□□ 1.3
CCHCR1-208ENST00000451521 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.39e-15■■■■■ 34.7
CCHCR1-208ENST00000451521 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
CCHCR1-208ENST00000451521 PBRM1Q86U86 1689 aa23.13■■□□□ 1.29
CCHCR1-208ENST00000451521 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
CCHCR1-208ENST00000451521 FHAD1B1AJZ9 1412 aa23.11■■□□□ 1.29
CCHCR1-208ENST00000451521 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-208ENST00000451521 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
CCHCR1-208ENST00000451521 P3H3Q8IVL6 736 aa23.07■■□□□ 1.28
CCHCR1-208ENST00000451521 IFT140Q96RY7 1462 aa23.07■■□□□ 1.28
CCHCR1-208ENST00000451521 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
CCHCR1-208ENST00000451521 RRBP1Q9P2E9 1410 aaKnown RBP23.04■■□□□ 1.28
CCHCR1-208ENST00000451521 SAMD9Q5K651 1589 aa23.03■■□□□ 1.28
CCHCR1-208ENST00000451521 CFAP43Q8NDM7 1665 aa23.02■■□□□ 1.28
CCHCR1-208ENST00000451521 ADAMTS12P58397 1594 aa23.02■■□□□ 1.28
CCHCR1-208ENST00000451521 THOC2Q8NI27 1593 aaKnown RBP23.02■■□□□ 1.28
CCHCR1-208ENST00000451521 FHOD3Q2V2M9 1422 aa23.02■■□□□ 1.28
CCHCR1-208ENST00000451521 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
CCHCR1-208ENST00000451521 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
CCHCR1-208ENST00000451521 FYCO1Q9BQS8 1478 aa23■■□□□ 1.27
CCHCR1-208ENST00000451521 CASKIN1Q8WXD9 1431 aa22.98■■□□□ 1.27
CCHCR1-208ENST00000451521 LRRC9Q6ZRR7 1453 aa22.97■■□□□ 1.27
CCHCR1-208ENST00000451521 ACIN1Q9UKV3 1341 aaKnown RBP22.95■■□□□ 1.26
CCHCR1-208ENST00000451521 FMN1Q68DA7 1419 aa22.95■■□□□ 1.26
CCHCR1-208ENST00000451521 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
CCHCR1-208ENST00000451521 CCNB3Q8WWL7 1395 aa22.89■■□□□ 1.26
CCHCR1-208ENST00000451521 NEUROD1Q13562 356 aa22.88■■□□□ 1.25
CCHCR1-208ENST00000451521 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
CCHCR1-208ENST00000451521 IQGAP2Q13576 1575 aa22.86■■□□□ 1.25
CCHCR1-208ENST00000451521 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
CCHCR1-208ENST00000451521 FBLN2P98095 1184 aa22.83■■□□□ 1.25
CCHCR1-208ENST00000451521 LRRIQ1Q96JM4 1722 aa22.8■■□□□ 1.24
CCHCR1-208ENST00000451521 PHLDB1Q86UU1 1377 aa22.79■■□□□ 1.24
CCHCR1-208ENST00000451521 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
CCHCR1-208ENST00000451521 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
CCHCR1-208ENST00000451521 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
CCHCR1-208ENST00000451521 KIAA0586Q9BVV6 1533 aa22.74■■□□□ 1.23
CCHCR1-208ENST00000451521 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
CCHCR1-208ENST00000451521 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
CCHCR1-208ENST00000451521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.68■■□□□ 1.223e-6■■■■□ 26.4
CCHCR1-208ENST00000451521 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
CCHCR1-208ENST00000451521 DHX57Q6P158 1386 aaKnown RBP22.67■■□□□ 1.22
CCHCR1-208ENST00000451521 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
CCHCR1-208ENST00000451521 CCDC18Q5T9S5 1454 aa22.67■■□□□ 1.22
CCHCR1-208ENST00000451521 HECW1Q76N89 1606 aa22.67■■□□□ 1.22
CCHCR1-208ENST00000451521 CENPBP07199 599 aaPredicted RBP22.66■■□□□ 1.22
CCHCR1-208ENST00000451521 ARID3CA6NKF2 412 aa22.64■■□□□ 1.22
CCHCR1-208ENST00000451521 MTUS2Q5JR59 1369 aa22.64■■□□□ 1.21
CCHCR1-208ENST00000451521 KIAA0556O60303 1618 aa22.64■■□□□ 1.21
CCHCR1-208ENST00000451521 EHBP1L1Q8N3D4 1523 aa22.64■■□□□ 1.21
CCHCR1-208ENST00000451521 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
CCHCR1-208ENST00000451521 DIEXFQ68CQ4 756 aaKnown RBP22.62■■□□□ 1.21
CCHCR1-208ENST00000451521 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
CCHCR1-208ENST00000451521 CEP170Q5SW79 1584 aa22.61■■□□□ 1.21
CCHCR1-208ENST00000451521 FGD6Q6ZV73 1430 aa22.59■■□□□ 1.21
CCHCR1-208ENST00000451521 ARHGEF11O15085 1522 aa22.58■■□□□ 1.2
CCHCR1-208ENST00000451521 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
CCHCR1-208ENST00000451521 MAGI3Q5TCQ9 1506 aa22.57■■□□□ 1.2
CCHCR1-208ENST00000451521 ITGAEP38570 1179 aa22.57■■□□□ 1.2
CCHCR1-208ENST00000451521 NCOA2Q15596 1464 aa22.57■■□□□ 1.2
CCHCR1-208ENST00000451521 NUP160Q12769 1436 aa22.56■■□□□ 1.2
CCHCR1-208ENST00000451521 FAM50AQ14320 339 aaKnown RBP22.56■■□□□ 1.2
CCHCR1-208ENST00000451521 RAB3GAP2Q9H2M9 1393 aa22.55■■□□□ 1.2
CCHCR1-208ENST00000451521 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
CCHCR1-208ENST00000451521 MYOM3Q5VTT5 1437 aa22.53■■□□□ 1.2
CCHCR1-208ENST00000451521 CDK13Q14004 1512 aaKnown RBP22.48■■□□□ 1.19
CCHCR1-208ENST00000451521 RAPGEF6Q8TEU7 1601 aa22.48■■□□□ 1.19
CCHCR1-208ENST00000451521 NUP153P49790 1475 aaKnown RBP22.44■■□□□ 1.18
CCHCR1-208ENST00000451521 PTPN23Q9H3S7 1636 aa22.44■■□□□ 1.18
CCHCR1-208ENST00000451521 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
CCHCR1-208ENST00000451521 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
CCHCR1-208ENST00000451521 MAPKBP1O60336 1514 aa22.41■■□□□ 1.18
CCHCR1-208ENST00000451521 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
CCHCR1-208ENST00000451521 JPH4Q96JJ6 628 aa22.4■■□□□ 1.18
CCHCR1-208ENST00000451521 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
CCHCR1-208ENST00000451521 CHD1O14646 1710 aa22.38■■□□□ 1.17
CCHCR1-208ENST00000451521 MIA2Q96PC5 1412 aa22.37■■□□□ 1.17
CCHCR1-208ENST00000451521 HFM1A2PYH4 1435 aa22.35■■□□□ 1.17
CCHCR1-208ENST00000451521 PLB1Q6P1J6 1458 aa22.32■■□□□ 1.16
CCHCR1-208ENST00000451521 ABCA8O94911 1581 aa22.28■■□□□ 1.16
CCHCR1-208ENST00000451521 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
CCHCR1-208ENST00000451521 NAIPQ13075 1403 aa22.28■■□□□ 1.16
CCHCR1-208ENST00000451521 TROQ12816 1431 aaPredicted RBP22.26■■□□□ 1.15
CCHCR1-208ENST00000451521 ADCY10Q96PN6 1610 aa22.25■■□□□ 1.15
CCHCR1-208ENST00000451521 AKNAQ7Z591 1439 aa22.24■■□□□ 1.15
CCHCR1-208ENST00000451521 GCC2Q8IWJ2 1684 aa22.23■■□□□ 1.15
CCHCR1-208ENST00000451521 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
CCHCR1-208ENST00000451521 UACAQ9BZF9 1416 aa22.21■■□□□ 1.15
CCHCR1-208ENST00000451521 SHROOM2Q13796 1616 aa22.21■■□□□ 1.15
CCHCR1-208ENST00000451521 ERCC6L2Q5T890 1561 aa22.18■■□□□ 1.14
CCHCR1-208ENST00000451521 YTHDC1Q96MU7 727 aaKnown RBP22.18■■□□□ 1.14
CCHCR1-208ENST00000451521 ITSN2Q9NZM3 1697 aa22.17■■□□□ 1.14
CCHCR1-208ENST00000451521 DNMT1P26358 1616 aaKnown RBP22.17■■□□□ 1.14
CCHCR1-208ENST00000451521 KIF14Q15058 1648 aa22.15■■□□□ 1.14
CCHCR1-208ENST00000451521 TIMELESSQ9UNS1 1208 aa22.15■■□□□ 1.14
CCHCR1-208ENST00000451521 ATP10BO94823 1461 aa22.15■■□□□ 1.14
CCHCR1-208ENST00000451521 DAPK1P53355 1430 aa22.13■■□□□ 1.13
CCHCR1-208ENST00000451521 PTPRGP23470 1445 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms