RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 ARHGEF11O15085 1522 aa29.25■■■□□ 2.27
HOXD8-203ENST00000450510 SHROOM2Q13796 1616 aa29.24■■■□□ 2.27
HOXD8-203ENST00000450510 JPH4Q96JJ6 628 aa29.23■■■□□ 2.27
HOXD8-203ENST00000450510 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.26
HOXD8-203ENST00000450510 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.26
HOXD8-203ENST00000450510 KIF21BO75037 1637 aa29.2■■■□□ 2.26
HOXD8-203ENST00000450510 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.26
HOXD8-203ENST00000450510 IQGAP2Q13576 1575 aa29.14■■■□□ 2.26
HOXD8-203ENST00000450510 GOLGA3Q08378 1498 aa29.11■■■□□ 2.25
HOXD8-203ENST00000450510 PRG4Q92954 1404 aaPredicted RBP29.11■■■□□ 2.25
HOXD8-203ENST00000450510 CTTNBP2Q8WZ74 1663 aa29.09■■■□□ 2.25
HOXD8-203ENST00000450510 TNIKQ9UKE5 1360 aa29.04■■■□□ 2.24
HOXD8-203ENST00000450510 UGGT2Q9NYU1 1516 aa29.04■■■□□ 2.24
HOXD8-203ENST00000450510 ARAP1Q96P48 1450 aa29.03■■■□□ 2.24
HOXD8-203ENST00000450510 ERCC6L2Q5T890 1561 aa29.01■■■□□ 2.24
HOXD8-203ENST00000450510 CARMIL2Q6F5E8 1435 aa29■■■□□ 2.23
HOXD8-203ENST00000450510 CYB5RLQ6IPT4 315 aa28.96■■■□□ 2.23
HOXD8-203ENST00000450510 DISP1Q96F81 1524 aa28.93■■■□□ 2.22
HOXD8-203ENST00000450510 UBTFP17480 764 aaKnown RBP28.91■■■□□ 2.22
HOXD8-203ENST00000450510 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
HOXD8-203ENST00000450510 KIAA0556O60303 1618 aa28.84■■■□□ 2.21
HOXD8-203ENST00000450510 CEP162Q5TB80 1403 aa28.83■■■□□ 2.21
HOXD8-203ENST00000450510 PTPRGP23470 1445 aa28.82■■■□□ 2.2
HOXD8-203ENST00000450510 SAMD9Q5K651 1589 aa28.78■■■□□ 2.2
HOXD8-203ENST00000450510 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
HOXD8-203ENST00000450510 UACAQ9BZF9 1416 aa28.64■■■□□ 2.18
HOXD8-203ENST00000450510 UHRF1BP1LA0JNW5 1464 aa28.64■■■□□ 2.17
HOXD8-203ENST00000450510 RANGAP1P46060 587 aaPredicted RBP28.62■■■□□ 2.17
HOXD8-203ENST00000450510 P3H3Q8IVL6 736 aa28.62■■■□□ 2.17
HOXD8-203ENST00000450510 TTBK1Q5TCY1 1321 aaPredicted RBP28.6■■■□□ 2.17
HOXD8-203ENST00000450510 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
HOXD8-203ENST00000450510 ADCY10Q96PN6 1610 aa28.59■■■□□ 2.17
HOXD8-203ENST00000450510 CLIP1P30622 1438 aa28.59■■■□□ 2.17
HOXD8-203ENST00000450510 ABCC2Q92887 1545 aa28.57■■■□□ 2.16
HOXD8-203ENST00000450510 FHOD3Q2V2M9 1422 aa28.56■■■□□ 2.16
HOXD8-203ENST00000450510 NPM1P06748 294 aaKnown RBP eCLIP28.55■■■□□ 2.16
HOXD8-203ENST00000450510 ABCA8O94911 1581 aa28.54■■■□□ 2.16
HOXD8-203ENST00000450510 PLB1Q6P1J6 1458 aa28.53■■■□□ 2.16
HOXD8-203ENST00000450510 KDM5BQ9UGL1 1544 aa28.48■■■□□ 2.15
HOXD8-203ENST00000450510 FMN1Q68DA7 1419 aa28.48■■■□□ 2.15
HOXD8-203ENST00000450510 TRIM26Q12899 539 aaPredicted RBP28.44■■■□□ 2.14
HOXD8-203ENST00000450510 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
HOXD8-203ENST00000450510 RAPGEF6Q8TEU7 1601 aa28.42■■■□□ 2.14
HOXD8-203ENST00000450510 VPS8Q8N3P4 1428 aa28.4■■■□□ 2.14
HOXD8-203ENST00000450510 ZCCHC11Q5TAX3 1644 aaKnown RBP28.34■■■□□ 2.13
HOXD8-203ENST00000450510 TRHP20396 242 aaPredicted RBP28.34■■■□□ 2.13
HOXD8-203ENST00000450510 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
HOXD8-203ENST00000450510 ATP10BO94823 1461 aa28.32■■■□□ 2.12
HOXD8-203ENST00000450510 PCGF6Q9BYE7 350 aa28.31■■■□□ 2.12
HOXD8-203ENST00000450510 ASXL2Q76L83 1435 aa28.29■■■□□ 2.12
HOXD8-203ENST00000450510 CASKIN1Q8WXD9 1431 aa28.27■■■□□ 2.12
HOXD8-203ENST00000450510 ABCC10Q5T3U5 1492 aa28.26■■■□□ 2.11
HOXD8-203ENST00000450510 HECW1Q76N89 1606 aa28.25■■■□□ 2.11
HOXD8-203ENST00000450510 WDR7Q9Y4E6 1490 aa28.21■■■□□ 2.11
HOXD8-203ENST00000450510 FYCO1Q9BQS8 1478 aa28.2■■■□□ 2.1
HOXD8-203ENST00000450510 EPRSP07814 1512 aaKnown RBP28.19■■■□□ 2.1
HOXD8-203ENST00000450510 DIP2BQ9P265 1576 aa28.17■■■□□ 2.1
HOXD8-203ENST00000450510 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
HOXD8-203ENST00000450510 ARID3CA6NKF2 412 aa28.16■■■□□ 2.1
HOXD8-203ENST00000450510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.16■■■□□ 2.1
HOXD8-203ENST00000450510 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
HOXD8-203ENST00000450510 FAM69CQ0P6D2 419 aa28.15■■■□□ 2.1
HOXD8-203ENST00000450510 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
HOXD8-203ENST00000450510 GLI2P10070 1586 aa28.15■■■□□ 2.1
HOXD8-203ENST00000450510 CCDC18Q5T9S5 1454 aa28.14■■■□□ 2.09
HOXD8-203ENST00000450510 KIF13AQ9H1H9 1805 aa28.13■■■□□ 2.09
HOXD8-203ENST00000450510 PLEKHD1A6NEE1 506 aa28.13■■■□□ 2.09
HOXD8-203ENST00000450510 CDK11AQ9UQ88 783 aaPredicted RBP28.12■■■□□ 2.09
HOXD8-203ENST00000450510 CDK13Q14004 1512 aaKnown RBP28.09■■■□□ 2.09
HOXD8-203ENST00000450510 APLP2Q06481 763 aa28.08■■■□□ 2.09
HOXD8-203ENST00000450510 LRRIQ1Q96JM4 1722 aa28.06■■■□□ 2.08
HOXD8-203ENST00000450510 KCNH8Q96L42 1107 aa28.04■■■□□ 2.08
HOXD8-203ENST00000450510 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
HOXD8-203ENST00000450510 TROQ12816 1431 aaPredicted RBP27.98■■■□□ 2.07
HOXD8-203ENST00000450510 MAP3K4Q9Y6R4 1608 aa27.97■■■□□ 2.07
HOXD8-203ENST00000450510 CFAP43Q8NDM7 1665 aa27.96■■■□□ 2.07
HOXD8-203ENST00000450510 PPARGC1BQ86YN6 1023 aaKnown RBP27.95■■■□□ 2.06
HOXD8-203ENST00000450510 ABCA9Q8IUA7 1624 aa27.95■■■□□ 2.06
HOXD8-203ENST00000450510 CD109Q6YHK3 1445 aa27.92■■■□□ 2.06
HOXD8-203ENST00000450510 MAGI3Q5TCQ9 1506 aa27.9■■■□□ 2.06
HOXD8-203ENST00000450510 TEX14Q8IWB6 1497 aa27.87■■■□□ 2.05
HOXD8-203ENST00000450510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.87■■■□□ 2.05
HOXD8-203ENST00000450510 KIF14Q15058 1648 aa27.85■■■□□ 2.05
HOXD8-203ENST00000450510 PPRC1Q5VV67 1664 aaKnown RBP27.84■■■□□ 2.05
HOXD8-203ENST00000450510 TIAM1Q13009 1591 aa27.84■■■□□ 2.05
HOXD8-203ENST00000450510 TSPOAP1O95153 1857 aa27.83■■■□□ 2.05
HOXD8-203ENST00000450510 MTUS2Q5JR59 1369 aa27.83■■■□□ 2.05
HOXD8-203ENST00000450510 EHBP1L1Q8N3D4 1523 aa27.79■■■□□ 2.04
HOXD8-203ENST00000450510 PHLDB1Q86UU1 1377 aa27.79■■■□□ 2.04
HOXD8-203ENST00000450510 TTC37Q6PGP7 1564 aa27.78■■■□□ 2.04
HOXD8-203ENST00000450510 PLCH2O75038 1416 aa27.76■■■□□ 2.04
HOXD8-203ENST00000450510 HRCP23327 699 aa27.76■■■□□ 2.03
HOXD8-203ENST00000450510 ARAP3Q8WWN8 1544 aa27.76■■■□□ 2.03
HOXD8-203ENST00000450510 LRRC9Q6ZRR7 1453 aa27.75■■■□□ 2.03
HOXD8-203ENST00000450510 NEO1Q92859 1461 aa27.73■■■□□ 2.03
HOXD8-203ENST00000450510 MYO5CQ9NQX4 1742 aa27.69■■■□□ 2.02
HOXD8-203ENST00000450510 KANK4Q5T7N3 995 aaPredicted RBP27.67■■■□□ 2.02
HOXD8-203ENST00000450510 CFAP74Q9C0B2 1584 aa27.66■■■□□ 2.02
HOXD8-203ENST00000450510 FANCAO15360 1455 aa27.66■■■□□ 2.02
HOXD8-203ENST00000450510 EFCAB2Q5VUJ9 269 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms