RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
HOXD8-203ENST00000450510 CCDC180Q9P1Z9 1646 aa37.61■■■■□ 3.61
HOXD8-203ENST00000450510 ABCC9O60706 1549 aa36.4■■■■□ 3.42
HOXD8-203ENST00000450510 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
HOXD8-203ENST00000450510 NACADO15069 1562 aa35.32■■■■□ 3.24
HOXD8-203ENST00000450510 MYO15BQ96JP2 1530 aa35.29■■■■□ 3.24
HOXD8-203ENST00000450510 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
HOXD8-203ENST00000450510 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
HOXD8-203ENST00000450510 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
HOXD8-203ENST00000450510 UNC13AQ9UPW8 1703 aa34.36■■■■□ 3.09
HOXD8-203ENST00000450510 SCRIBQ14160 1630 aa34.2■■■■□ 3.07
HOXD8-203ENST00000450510 BICRAQ9NZM4 1560 aa34.14■■■■□ 3.06
HOXD8-203ENST00000450510 PABPN1Q86U42 306 aaKnown RBP eCLIP34.06■■■■□ 3.04
HOXD8-203ENST00000450510 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.02
HOXD8-203ENST00000450510 EIF4G1Q04637 1599 aaKnown RBP33.21■■■□□ 2.91
HOXD8-203ENST00000450510 DNAJC5BQ9UF47 199 aa33.18■■■□□ 2.9
HOXD8-203ENST00000450510 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
HOXD8-203ENST00000450510 CECR2Q9BXF3 1484 aa32.96■■■□□ 2.87
HOXD8-203ENST00000450510 BAZ1AQ9NRL2 1556 aaPredicted RBP32.87■■■□□ 2.85
HOXD8-203ENST00000450510 SMARCA4P51532 1647 aa32.83■■■□□ 2.85
HOXD8-203ENST00000450510 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
HOXD8-203ENST00000450510 ATAD2BQ9ULI0 1458 aa32.61■■■□□ 2.81
HOXD8-203ENST00000450510 SMARCA2P51531 1590 aa32.61■■■□□ 2.81
HOXD8-203ENST00000450510 NCAPD3P42695 1498 aa32.61■■■□□ 2.81
HOXD8-203ENST00000450510 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
HOXD8-203ENST00000450510 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
HOXD8-203ENST00000450510 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
HOXD8-203ENST00000450510 BAZ1BQ9UIG0 1483 aaKnown RBP32.33■■■□□ 2.77
HOXD8-203ENST00000450510 WIZO95785 1651 aa32.28■■■□□ 2.76
HOXD8-203ENST00000450510 TOP2AP11388 1531 aaKnown RBP32.02■■■□□ 2.72
HOXD8-203ENST00000450510 SUPT5HO00267 1087 aaKnown RBP31.94■■■□□ 2.7
HOXD8-203ENST00000450510 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
HOXD8-203ENST00000450510 CADPSQ9ULU8 1353 aa31.65■■■□□ 2.66
HOXD8-203ENST00000450510 CCDC88BA6NC98 1476 aa31.64■■■□□ 2.66
HOXD8-203ENST00000450510 NESP48681 1621 aa31.58■■■□□ 2.65
HOXD8-203ENST00000450510 CFTRP13569 1480 aa31.52■■■□□ 2.64
HOXD8-203ENST00000450510 PDS5BQ9NTI5 1447 aa31.45■■■□□ 2.63
HOXD8-203ENST00000450510 ERCC6Q03468 1493 aa31.38■■■□□ 2.61
HOXD8-203ENST00000450510 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
HOXD8-203ENST00000450510 FANCD2Q9BXW9 1451 aa31.22■■■□□ 2.59
HOXD8-203ENST00000450510 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
HOXD8-203ENST00000450510 CEP164Q9UPV0 1460 aa31.16■■■□□ 2.58
HOXD8-203ENST00000450510 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
HOXD8-203ENST00000450510 MRC2Q9UBG0 1479 aa31.07■■■□□ 2.56
HOXD8-203ENST00000450510 CUX2O14529 1486 aa31.03■■■□□ 2.56
HOXD8-203ENST00000450510 WDR62O43379 1518 aa30.96■■■□□ 2.55
HOXD8-203ENST00000450510 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
HOXD8-203ENST00000450510 ABCC8Q09428 1581 aa30.88■■■□□ 2.53
HOXD8-203ENST00000450510 CHIC1Q5VXU3 224 aa30.77■■■□□ 2.52
HOXD8-203ENST00000450510 TOPBP1Q92547 1522 aa30.76■■■□□ 2.51
HOXD8-203ENST00000450510 DNMBPQ6XZF7 1577 aa30.75■■■□□ 2.51
HOXD8-203ENST00000450510 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
HOXD8-203ENST00000450510 CUX1P39880 1505 aa30.61■■■□□ 2.49
HOXD8-203ENST00000450510 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
HOXD8-203ENST00000450510 IFT140Q96RY7 1462 aa30.53■■■□□ 2.48
HOXD8-203ENST00000450510 POLA1P09884 1462 aaPredicted RBP30.51■■■□□ 2.48
HOXD8-203ENST00000450510 FGD5Q6ZNL6 1462 aa30.47■■■□□ 2.47
HOXD8-203ENST00000450510 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
HOXD8-203ENST00000450510 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.47
HOXD8-203ENST00000450510 SOGA1O94964 1423 aa30.42■■■□□ 2.46
HOXD8-203ENST00000450510 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
HOXD8-203ENST00000450510 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
HOXD8-203ENST00000450510 RAD54L2Q9Y4B4 1467 aa30.34■■■□□ 2.45
HOXD8-203ENST00000450510 ZNF608Q9ULD9 1512 aaPredicted RBP30.28■■■□□ 2.44
HOXD8-203ENST00000450510 WDR97A6NE52 1622 aa30.27■■■□□ 2.44
HOXD8-203ENST00000450510 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
HOXD8-203ENST00000450510 EIF4G3O43432 1585 aaKnown RBP30.18■■■□□ 2.42
HOXD8-203ENST00000450510 AQRO60306 1485 aaKnown RBP eCLIP30.18■■■□□ 2.42
HOXD8-203ENST00000450510 TDRD9Q8NDG6 1382 aaKnown RBP30.16■■■□□ 2.42
HOXD8-203ENST00000450510 TRIM41Q8WV44 630 aa30.14■■■□□ 2.42
HOXD8-203ENST00000450510 GAPVD1Q14C86 1478 aa30.06■■■□□ 2.4
HOXD8-203ENST00000450510 ABCA5Q8WWZ7 1642 aa30.05■■■□□ 2.4
HOXD8-203ENST00000450510 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
HOXD8-203ENST00000450510 MAGI1Q96QZ7 1491 aaPredicted RBP29.94■■■□□ 2.38
HOXD8-203ENST00000450510 KIF27Q86VH2 1401 aa29.93■■■□□ 2.38
HOXD8-203ENST00000450510 PBRM1Q86U86 1689 aa29.91■■■□□ 2.38
HOXD8-203ENST00000450510 ERICH3Q5RHP9 1530 aa29.9■■■□□ 2.38
HOXD8-203ENST00000450510 SNAPC4Q5SXM2 1469 aa29.89■■■□□ 2.38
HOXD8-203ENST00000450510 OSCARQ8IYS5 282 aa29.81■■■□□ 2.36
HOXD8-203ENST00000450510 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
HOXD8-203ENST00000450510 IGF1RP08069 1367 aa29.77■■■□□ 2.36
HOXD8-203ENST00000450510 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
HOXD8-203ENST00000450510 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.35
HOXD8-203ENST00000450510 ADAMTS12P58397 1594 aa29.73■■■□□ 2.35
HOXD8-203ENST00000450510 CHD1O14646 1710 aa29.72■■■□□ 2.35
HOXD8-203ENST00000450510 FBLN2P98095 1184 aa29.72■■■□□ 2.35
HOXD8-203ENST00000450510 CUL7Q14999 1698 aa29.65■■■□□ 2.34
HOXD8-203ENST00000450510 RUSC2Q8N2Y8 1516 aa29.65■■■□□ 2.34
HOXD8-203ENST00000450510 GRIN2AQ12879 1464 aa29.63■■■□□ 2.33
HOXD8-203ENST00000450510 EEA1Q15075 1411 aa29.62■■■□□ 2.33
HOXD8-203ENST00000450510 CARMIL1Q5VZK9 1371 aa29.6■■■□□ 2.33
HOXD8-203ENST00000450510 NUP160Q12769 1436 aa29.53■■■□□ 2.32
HOXD8-203ENST00000450510 CSRNP3Q8WYN3 585 aa29.48■■■□□ 2.31
HOXD8-203ENST00000450510 CLASP1Q7Z460 1538 aa29.48■■■□□ 2.31
HOXD8-203ENST00000450510 RAPGEF2Q9Y4G8 1499 aa29.45■■■□□ 2.31
HOXD8-203ENST00000450510 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
HOXD8-203ENST00000450510 PRXQ9BXM0 1461 aa29.43■■■□□ 2.3
HOXD8-203ENST00000450510 CEP170Q5SW79 1584 aa29.43■■■□□ 2.3
HOXD8-203ENST00000450510 FAM9AQ8IZU1 332 aaPredicted RBP29.42■■■□□ 2.3
HOXD8-203ENST00000450510 KIAA0586Q9BVV6 1533 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms